RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 Q6ZSV7 163 aa12.03□□□□□ -0.48
RANBP3-209ENST00000587411 PSMB8P28062 276 aa12.03□□□□□ -0.48
RANBP3-209ENST00000587411 RNASE13Q5GAN3 156 aaKnown RBP12.03□□□□□ -0.48
RANBP3-209ENST00000587411 CHCHD7Q9BUK0 85 aa12.03□□□□□ -0.48
RANBP3-209ENST00000587411 NDUFA1O15239 70 aa12.02□□□□□ -0.49
RANBP3-209ENST00000587411 CIRBPQ14011 172 aaKnown RBP12.02□□□□□ -0.49
RANBP3-209ENST00000587411 PIK3CD-AS1Q5SR53 167 aa12.02□□□□□ -0.49
RANBP3-209ENST00000587411 TMEM101Q96IK0 257 aa12.02□□□□□ -0.49
RANBP3-209ENST00000587411 IGHV3-73A0A0B4J1V6 119 aa12.01□□□□□ -0.49
RANBP3-209ENST00000587411 PIMREGQ9BSJ6 248 aa12.01□□□□□ -0.49
RANBP3-209ENST00000587411 IMUPQ9GZP8 106 aa12.01□□□□□ -0.49
RANBP3-209ENST00000587411 A8MZ25 164 aa12.01□□□□□ -0.49
RANBP3-209ENST00000587411 UCNP55089 124 aa12.01□□□□□ -0.49
RANBP3-209ENST00000587411 MEIG1Q5JSS6 88 aa12.01□□□□□ -0.49
RANBP3-209ENST00000587411 TIRAPP58753 221 aa12□□□□□ -0.49
RANBP3-209ENST00000587411 IGHV4-61A0A0C4DH41 118 aa12□□□□□ -0.49
RANBP3-209ENST00000587411 TMEM89A2RUT3 159 aa12□□□□□ -0.49
RANBP3-209ENST00000587411 PROK1P58294 105 aa12□□□□□ -0.49
RANBP3-209ENST00000587411 IGLV5-45A0A087WSX0 123 aa11.99□□□□□ -0.49
RANBP3-209ENST00000587411 COPS9Q8WXC6 57 aa11.99□□□□□ -0.49
RANBP3-209ENST00000587411 PTPRQQ9UMZ3 2332 aa11.99□□□□□ -0.49
RANBP3-209ENST00000587411 PRRC2AP48634 2157 aaKnown RBP11.98□□□□□ -0.49
RANBP3-209ENST00000587411 CITED2Q99967 270 aaPredicted RBP11.98□□□□□ -0.49
RANBP3-209ENST00000587411 DNAJC30Q96LL9 226 aa11.98□□□□□ -0.49
RANBP3-209ENST00000587411 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.97□□□□□ -0.49
RANBP3-209ENST00000587411 IGKV2-29A2NJV5 120 aaPredicted RBP11.97□□□□□ -0.49
RANBP3-209ENST00000587411 COX7A2LO14548 114 aa11.97□□□□□ -0.49
RANBP3-209ENST00000587411 RBMY1A1P0DJD3 496 aaKnown RBP11.97□□□□□ -0.49
RANBP3-209ENST00000587411 RBMY1CP0DJD4 496 aa11.97□□□□□ -0.49
RANBP3-209ENST00000587411 RBMY1FQ15415 496 aaKnown RBP11.97□□□□□ -0.49
RANBP3-209ENST00000587411 SMIM20Q8N5G0 67 aa11.97□□□□□ -0.49
RANBP3-209ENST00000587411 CDKN2A-AS1Q9UH64 79 aa11.97□□□□□ -0.49
RANBP3-209ENST00000587411 LINC00467Q9BRT7 94 aa11.97□□□□□ -0.49
RANBP3-209ENST00000587411 TMEM126AQ9H061 195 aa11.97□□□□□ -0.49
RANBP3-209ENST00000587411 LINC00308Q8TCZ7 52 aa11.96□□□□□ -0.49
RANBP3-209ENST00000587411 CHCHD5Q9BSY4 110 aa11.96□□□□□ -0.49
RANBP3-209ENST00000587411 SPTA1P02549 2419 aa11.96□□□□□ -0.49
RANBP3-209ENST00000587411 ZNF415Q09FC8 603 aa11.96□□□□□ -0.5
RANBP3-209ENST00000587411 DAND5Q8N907 189 aa11.96□□□□□ -0.5
RANBP3-209ENST00000587411 PRORYQ9H606 182 aa11.96□□□□□ -0.5
RANBP3-209ENST00000587411 SPTBN1Q01082 2364 aaKnown RBP11.95□□□□□ -0.5
RANBP3-209ENST00000587411 HTN1P15515 57 aa11.95□□□□□ -0.5
RANBP3-209ENST00000587411 SYNJ2BPP57105 145 aa11.95□□□□□ -0.5
RANBP3-209ENST00000587411 C10orf105Q8TEF2 133 aa11.95□□□□□ -0.5
RANBP3-209ENST00000587411 SHISA2Q6UWI4 295 aa11.94□□□□□ -0.5
RANBP3-209ENST00000587411 SVEP1Q4LDE5 3571 aa11.94□□□□□ -0.5
RANBP3-209ENST00000587411 IGLV5-39A0A0G2JS06 123 aa11.94□□□□□ -0.5
RANBP3-209ENST00000587411 KNCNA6PVL3 124 aa11.94□□□□□ -0.5
RANBP3-209ENST00000587411 A8MTW9 85 aa11.94□□□□□ -0.5
RANBP3-209ENST00000587411 Q6ZSN1 163 aa11.94□□□□□ -0.5
RANBP3-209ENST00000587411 IGF2RP11717 2491 aa11.94□□□□□ -0.5
RANBP3-209ENST00000587411 LINC00643Q86TS7 51 aa11.94□□□□□ -0.5
RANBP3-209ENST00000587411 IGHV3-53P01767 116 aa11.93□□□□□ -0.5
RANBP3-209ENST00000587411 HERVK_113P63121 156 aa11.93□□□□□ -0.5
RANBP3-209ENST00000587411 HERV-K104P63124 156 aa11.93□□□□□ -0.5
RANBP3-209ENST00000587411 TRACP01848 142 aa11.93□□□□□ -0.5
RANBP3-209ENST00000587411 MSMBP08118 114 aa11.93□□□□□ -0.5
RANBP3-209ENST00000587411 Q9H8V8 135 aa11.93□□□□□ -0.5
RANBP3-209ENST00000587411 Q9UF83 564 aa11.93□□□□□ -0.5
RANBP3-209ENST00000587411 ABCA2Q9BZC7 2435 aa11.92□□□□□ -0.5
RANBP3-209ENST00000587411 DGAT2L7PQ6IED9 249 aa11.92□□□□□ -0.5
RANBP3-209ENST00000587411 DUX5Q96PT3 197 aa11.92□□□□□ -0.5
RANBP3-209ENST00000587411 SPTBN4Q9H254 2564 aa11.92□□□□□ -0.5
RANBP3-209ENST00000587411 FAM236AA0A1B0GUQ0 79 aa11.92□□□□□ -0.5
RANBP3-209ENST00000587411 FAM236BA0A1B0GV22 79 aa11.92□□□□□ -0.5
RANBP3-209ENST00000587411 LINC01587Q99440 93 aa11.92□□□□□ -0.5
RANBP3-209ENST00000587411 C10orf99Q6UWK7 81 aa11.91□□□□□ -0.5
RANBP3-209ENST00000587411 RELNP78509 3460 aa11.9□□□□□ -0.5
RANBP3-209ENST00000587411 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.9□□□□□ -0.5
RANBP3-209ENST00000587411 ATP5G1P05496 136 aa11.9□□□□□ -0.5
RANBP3-209ENST00000587411 FAM19A3Q7Z5A8 133 aa11.9□□□□□ -0.5
RANBP3-209ENST00000587411 PPDPFQ9H3Y8 114 aa11.9□□□□□ -0.5
RANBP3-209ENST00000587411 ASH1LQ9NR48 2969 aaKnown RBP11.9□□□□□ -0.5
RANBP3-209ENST00000587411 IGHV3-38A0A0C4DH36 116 aa11.89□□□□□ -0.51
RANBP3-209ENST00000587411 LY6DQ14210 128 aa11.89□□□□□ -0.51
RANBP3-209ENST00000587411 SDIM1Q6ZPB5 146 aa11.89□□□□□ -0.51
RANBP3-209ENST00000587411 C19orf84I3L1E1 186 aa11.89□□□□□ -0.51
RANBP3-209ENST00000587411 HOXD3P31249 432 aaPredicted RBP11.89□□□□□ -0.51
RANBP3-209ENST00000587411 DEFB131AP59861 70 aa11.89□□□□□ -0.51
RANBP3-209ENST00000587411 FAM222AQ5U5X8 452 aa11.89□□□□□ -0.51
RANBP3-209ENST00000587411 IGHV3OR16-12A0A075B7B8 117 aa11.88□□□□□ -0.51
RANBP3-209ENST00000587411 COX6A2Q02221 97 aa11.88□□□□□ -0.51
RANBP3-209ENST00000587411 BEAN1Q3B7T3 259 aa11.88□□□□□ -0.51
RANBP3-209ENST00000587411 DAZ2Q13117 558 aaKnown RBP11.88□□□□□ -0.51
RANBP3-209ENST00000587411 LINC00242Q5T6M2 205 aa11.88□□□□□ -0.51
RANBP3-209ENST00000587411 DAZ4Q86SG3 579 aaKnown RBP11.88□□□□□ -0.51
RANBP3-209ENST00000587411 DAZ3Q9NR90 486 aaKnown RBP11.88□□□□□ -0.51
RANBP3-209ENST00000587411 PEMTQ9UBM1 199 aa11.88□□□□□ -0.51
RANBP3-209ENST00000587411 COL6A6A6NMZ7 2263 aa11.87□□□□□ -0.51
RANBP3-209ENST00000587411 RS1O15537 224 aa11.87□□□□□ -0.51
RANBP3-209ENST00000587411 SMCR5Q8TEV8 140 aa11.87□□□□□ -0.51
RANBP3-209ENST00000587411 IGHV4-59P01825 116 aa11.87□□□□□ -0.51
RANBP3-209ENST00000587411 BAALC-AS2P0C853 105 aa11.87□□□□□ -0.51
RANBP3-209ENST00000587411 SOSTDC1Q6X4U4 206 aa11.87□□□□□ -0.51
RANBP3-209ENST00000587411 CCL19Q99731 98 aa11.87□□□□□ -0.51
RANBP3-209ENST00000587411 RBMY1BA6NDE4 496 aaKnown RBP11.86□□□□□ -0.51
RANBP3-209ENST00000587411 RBMY1EA6NEQ0 496 aaKnown RBP11.86□□□□□ -0.51
RANBP3-209ENST00000587411 SMIM1B2RUZ4 78 aa11.86□□□□□ -0.51
RANBP3-209ENST00000587411 RBMY1DP0C7P1 496 aaKnown RBP11.86□□□□□ -0.51
RANBP3-209ENST00000587411 INAFM2P0DMQ5 153 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms