RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 GAGE6Q13070 117 aa6.89□□□□□ -1.31
SMARCA4-209ENST00000586122 ENHOQ6UWT2 76 aa6.89□□□□□ -1.31
SMARCA4-209ENST00000586122 TMEM70Q9BUB7 260 aa6.89□□□□□ -1.31
SMARCA4-209ENST00000586122 TRAV8-4A0A0B4J246 113 aa6.88□□□□□ -1.31
SMARCA4-209ENST00000586122 TRAV26-2A0A0B4J265 109 aa6.88□□□□□ -1.31
SMARCA4-209ENST00000586122 SMIM27A0A1W2PRY6 76 aa6.88□□□□□ -1.31
SMARCA4-209ENST00000586122 S100A8P05109 93 aa6.88□□□□□ -1.31
SMARCA4-209ENST00000586122 SRSF3P84103 164 aaKnown RBP6.88□□□□□ -1.31
SMARCA4-209ENST00000586122 MAPKAPK5-AS1Q8N8E1 139 aa6.88□□□□□ -1.31
SMARCA4-209ENST00000586122 NUP35Q8NFH5 326 aa6.88□□□□□ -1.31
SMARCA4-209ENST00000586122 SDHAF1A6NFY7 115 aa6.87□□□□□ -1.31
SMARCA4-209ENST00000586122 I3L3M4 83 aa6.87□□□□□ -1.31
SMARCA4-209ENST00000586122 PPP1R2P9O14990 202 aa6.87□□□□□ -1.31
SMARCA4-209ENST00000586122 APCSP02743 223 aa6.87□□□□□ -1.31
SMARCA4-209ENST00000586122 KRTAP10-1P60331 282 aa6.87□□□□□ -1.31
SMARCA4-209ENST00000586122 PNRC1Q12796 327 aaPredicted RBP6.87□□□□□ -1.31
SMARCA4-209ENST00000586122 LINC00269Q8N2A0 174 aa6.87□□□□□ -1.31
SMARCA4-209ENST00000586122 BAALCQ8WXS3 180 aa6.87□□□□□ -1.31
SMARCA4-209ENST00000586122 RPL39LQ96EH5 51 aaKnown RBP6.87□□□□□ -1.31
SMARCA4-209ENST00000586122 ST20Q9HBF5 79 aa6.87□□□□□ -1.31
SMARCA4-209ENST00000586122 DNAH5Q8TE73 4624 aa6.87□□□□□ -1.31
SMARCA4-209ENST00000586122 RAB4AP20338 218 aa6.86□□□□□ -1.31
SMARCA4-209ENST00000586122 REG3AQ06141 175 aa6.86□□□□□ -1.31
SMARCA4-209ENST00000586122 WFDC2Q14508 124 aa6.86□□□□□ -1.31
SMARCA4-209ENST00000586122 CLLU1Q5K131 121 aa6.86□□□□□ -1.31
SMARCA4-209ENST00000586122 Q8N1X5 172 aa6.86□□□□□ -1.31
SMARCA4-209ENST00000586122 C20orf203Q8NBC4 194 aa6.86□□□□□ -1.31
SMARCA4-209ENST00000586122 HSPG2P98160 4391 aa6.85□□□□□ -1.31
SMARCA4-209ENST00000586122 TRBV27A0A0K0K1C4 114 aa6.85□□□□□ -1.31
SMARCA4-209ENST00000586122 LINC00862A6NCI5 91 aa6.85□□□□□ -1.31
SMARCA4-209ENST00000586122 LECT2O14960 151 aa6.85□□□□□ -1.31
SMARCA4-209ENST00000586122 ZNF25P17030 456 aaPredicted RBP6.85□□□□□ -1.31
SMARCA4-209ENST00000586122 PMCHP20382 165 aa6.85□□□□□ -1.31
SMARCA4-209ENST00000586122 FUSP35637 526 aaKnown RBP eCLIP6.85□□□□□ -1.31
SMARCA4-209ENST00000586122 AMMECR1LQ6DCA0 310 aa6.85□□□□□ -1.31
SMARCA4-209ENST00000586122 AMN1Q8IY45 258 aa6.85□□□□□ -1.31
SMARCA4-209ENST00000586122 RNF185Q96GF1 192 aa6.85□□□□□ -1.31
SMARCA4-209ENST00000586122 F8W036 122 aa6.84□□□□□ -1.31
SMARCA4-209ENST00000586122 HLA-DQA1P01909 254 aa6.84□□□□□ -1.31
SMARCA4-209ENST00000586122 SMAGPQ0VAQ4 97 aa6.84□□□□□ -1.31
SMARCA4-209ENST00000586122 FAM104BQ5XKR9 115 aa6.84□□□□□ -1.31
SMARCA4-209ENST00000586122 APOBP04114 4563 aaKnown RBP6.84□□□□□ -1.31
SMARCA4-209ENST00000586122 IGLV4-60A0A075B6I1 120 aa6.83□□□□□ -1.32
SMARCA4-209ENST00000586122 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.83□□□□□ -1.32
SMARCA4-209ENST00000586122 VCYO14598 125 aa6.83□□□□□ -1.32
SMARCA4-209ENST00000586122 TCAPO15273 167 aa6.83□□□□□ -1.32
SMARCA4-209ENST00000586122 POLR2KP53803 58 aaKnown RBP6.83□□□□□ -1.32
SMARCA4-209ENST00000586122 XGP55808 180 aa6.83□□□□□ -1.32
SMARCA4-209ENST00000586122 HBBP68871 147 aa6.83□□□□□ -1.32
SMARCA4-209ENST00000586122 CLPSL2Q6UWE3 100 aa6.83□□□□□ -1.32
SMARCA4-209ENST00000586122 ATP5L2Q7Z4Y8 100 aa6.83□□□□□ -1.32
SMARCA4-209ENST00000586122 CLRN3Q8NCR9 226 aa6.83□□□□□ -1.32
SMARCA4-209ENST00000586122 ANAPC16Q96DE5 110 aa6.83□□□□□ -1.32
SMARCA4-209ENST00000586122 BTF3L4Q96K17 158 aa6.83□□□□□ -1.32
SMARCA4-209ENST00000586122 USP17L23D6RBM5 183 aa6.82□□□□□ -1.32
SMARCA4-209ENST00000586122 MT-ND4LP03901 98 aa6.82□□□□□ -1.32
SMARCA4-209ENST00000586122 FGF6P10767 208 aa6.82□□□□□ -1.32
SMARCA4-209ENST00000586122 ESDP10768 282 aa6.82□□□□□ -1.32
SMARCA4-209ENST00000586122 RPS10P46783 165 aaKnown RBP6.82□□□□□ -1.32
SMARCA4-209ENST00000586122 CAMPP49913 170 aa6.82□□□□□ -1.32
SMARCA4-209ENST00000586122 SUMO2P61956 95 aaKnown RBP6.82□□□□□ -1.32
SMARCA4-209ENST00000586122 DGAT2L7PQ6IED9 249 aa6.82□□□□□ -1.32
SMARCA4-209ENST00000586122 RNASEKQ6P5S7 137 aaKnown RBP6.82□□□□□ -1.32
SMARCA4-209ENST00000586122 KRTAP26-1Q6PEX3 210 aa6.82□□□□□ -1.32
SMARCA4-209ENST00000586122 UQCC3Q6UW78 93 aa6.82□□□□□ -1.32
SMARCA4-209ENST00000586122 TMEM101Q96IK0 257 aa6.82□□□□□ -1.32
SMARCA4-209ENST00000586122 KIR2DL4Q99706 377 aa6.82□□□□□ -1.32
SMARCA4-209ENST00000586122 C20orf78Q9BR46 151 aa6.82□□□□□ -1.32
SMARCA4-209ENST00000586122 PCLOQ9Y6V0 5065 aa6.81□□□□□ -1.32
SMARCA4-209ENST00000586122 TRBV24-1A0A075B6N3 115 aa6.81□□□□□ -1.32
SMARCA4-209ENST00000586122 A0A1B0GXF2 115 aa6.81□□□□□ -1.32
SMARCA4-209ENST00000586122 C7orf77A4D0Y5 90 aa6.81□□□□□ -1.32
SMARCA4-209ENST00000586122 PHOX2AO14813 284 aa6.81□□□□□ -1.32
SMARCA4-209ENST00000586122 TSHBP01222 138 aa6.81□□□□□ -1.32
SMARCA4-209ENST00000586122 PPBPP02775 128 aa6.81□□□□□ -1.32
SMARCA4-209ENST00000586122 RPL32P62910 135 aaKnown RBP6.81□□□□□ -1.32
SMARCA4-209ENST00000586122 Q6ZSA8 131 aa6.81□□□□□ -1.32
SMARCA4-209ENST00000586122 MRPL52Q86TS9 123 aaKnown RBP6.81□□□□□ -1.32
SMARCA4-209ENST00000586122 NRACQ8N912 160 aa6.81□□□□□ -1.32
SMARCA4-209ENST00000586122 TMEM242Q9NWH2 141 aa6.81□□□□□ -1.32
SMARCA4-209ENST00000586122 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.8□□□□□ -1.32
SMARCA4-209ENST00000586122 IGKV2-29A2NJV5 120 aaPredicted RBP6.8□□□□□ -1.32
SMARCA4-209ENST00000586122 EPM2AB3EWF7 344 aa6.8□□□□□ -1.32
SMARCA4-209ENST00000586122 GAS8-AS1O95177 125 aa6.8□□□□□ -1.32
SMARCA4-209ENST00000586122 FCER1GP30273 86 aa6.8□□□□□ -1.32
SMARCA4-209ENST00000586122 CKS2P33552 79 aa6.8□□□□□ -1.32
SMARCA4-209ENST00000586122 MRPL51Q4U2R6 128 aaKnown RBP6.8□□□□□ -1.32
SMARCA4-209ENST00000586122 MRPL54Q6P161 138 aaKnown RBP6.8□□□□□ -1.32
SMARCA4-209ENST00000586122 CFAP161Q6P656 301 aa6.8□□□□□ -1.32
SMARCA4-209ENST00000586122 OR5A1Q8NGJ0 315 aa6.8□□□□□ -1.32
SMARCA4-209ENST00000586122 DEFB104AQ8WTQ1 72 aa6.8□□□□□ -1.32
SMARCA4-209ENST00000586122 IGLV10-54A0A075B6I4 117 aa6.79□□□□□ -1.32
SMARCA4-209ENST00000586122 TMEM18Q96B42 140 aa6.79□□□□□ -1.32
SMARCA4-209ENST00000586122 CSDC2Q9Y534 153 aaKnown RBP6.79□□□□□ -1.32
SMARCA4-209ENST00000586122 SMKR1H3BMG3 65 aa6.78□□□□□ -1.32
SMARCA4-209ENST00000586122 PRSS1P07477 247 aa6.78□□□□□ -1.32
SMARCA4-209ENST00000586122 AP5S1Q9NUS5 200 aa6.78□□□□□ -1.32
SMARCA4-209ENST00000586122 LAMTOR2Q9Y2Q5 125 aa6.78□□□□□ -1.32
SMARCA4-209ENST00000586122 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.77□□□□□ -1.33
SMARCA4-209ENST00000586122 D6R8Y8 96 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms