RNA–Protein interactions for RNA: ENST00000585630.5

CIRBP-204, Transcript of cold inducible RNA binding protein, human

APPRIS P3 TSL 3 BASIC

Gene CIRBP, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-204	ENST00000585630	WDR73	Q6P4I2	378 aa		10.89	□□□□□ -0.67
CIRBP-204	ENST00000585630	CHCHD5	Q9BSY4	110 aa		10.89	□□□□□ -0.67
CIRBP-204	ENST00000585630	DPH3P1	Q9H4G8	78 aa		10.89	□□□□□ -0.67
CIRBP-204	ENST00000585630	TMEM262	E9PQX1	116 aa		10.88	□□□□□ -0.67
CIRBP-204	ENST00000585630	TWIST1	Q15672	202 aa		10.88	□□□□□ -0.67
CIRBP-204	ENST00000585630	TSKU	Q8WUA8	353 aa		10.88	□□□□□ -0.67
CIRBP-204	ENST00000585630	BAALC	Q8WXS3	180 aa		10.88	□□□□□ -0.67
CIRBP-204	ENST00000585630	TRBV25-1	A0A075B6N4	114 aa		10.87	□□□□□ -0.67
CIRBP-204	ENST00000585630	CRP	P02741	224 aa		10.87	□□□□□ -0.67
CIRBP-204	ENST00000585630	IQCJ	Q1A5X6	159 aa		10.87	□□□□□ -0.67
CIRBP-204	ENST00000585630	RASL11A	Q6T310	242 aa		10.87	□□□□□ -0.67
CIRBP-204	ENST00000585630	FRZB	Q92765	325 aa		10.87	□□□□□ -0.67
CIRBP-204	ENST00000585630	PGLYRP4	Q96LB8	373 aa		10.87	□□□□□ -0.67
CIRBP-204	ENST00000585630	TMEM242	Q9NWH2	141 aa		10.87	□□□□□ -0.67
CIRBP-204	ENST00000585630	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	10.86	□□□□□ -0.67
CIRBP-204	ENST00000585630	SMIM27	A0A1W2PRY6	76 aa		10.86	□□□□□ -0.67
CIRBP-204	ENST00000585630	ANG	P03950	147 aa	Known RBP	10.86	□□□□□ -0.67
CIRBP-204	ENST00000585630	ENHO	Q6UWT2	76 aa		10.86	□□□□□ -0.67
CIRBP-204	ENST00000585630		Q8N976	141 aa		10.86	□□□□□ -0.67
CIRBP-204	ENST00000585630	C1orf43	Q9BWL3	253 aa		10.86	□□□□□ -0.67
CIRBP-204	ENST00000585630	GFRA4	Q9GZZ7	299 aa		10.86	□□□□□ -0.67
CIRBP-204	ENST00000585630	IGHV1-24	A0A0C4DH33	117 aa		10.85	□□□□□ -0.67
CIRBP-204	ENST00000585630	FAM231B	A6NCW3	169 aa		10.85	□□□□□ -0.67
CIRBP-204	ENST00000585630	FOXA3	P55318	350 aa	Predicted RBP	10.85	□□□□□ -0.67
CIRBP-204	ENST00000585630		Q5VSD8	79 aa		10.85	□□□□□ -0.67
CIRBP-204	ENST00000585630	HIGD1C	A8MV81	97 aa		10.84	□□□□□ -0.67
CIRBP-204	ENST00000585630	HAMP	P81172	84 aa		10.84	□□□□□ -0.67
CIRBP-204	ENST00000585630		Q6ZSA8	131 aa		10.84	□□□□□ -0.67
CIRBP-204	ENST00000585630	IMMP2L	Q96T52	175 aa		10.84	□□□□□ -0.67
CIRBP-204	ENST00000585630	NIT2	Q9NQR4	276 aa		10.84	□□□□□ -0.67
CIRBP-204	ENST00000585630	PRR34	Q9NV39	138 aa		10.84	□□□□□ -0.67
CIRBP-204	ENST00000585630	NAT8B	Q9UHF3	227 aa		10.84	□□□□□ -0.67
CIRBP-204	ENST00000585630	SRRM2	Q9UQ35	2752 aa	Known RBP	10.84	□□□□□ -0.67
CIRBP-204	ENST00000585630	RBX1	P62877	108 aa		10.83	□□□□□ -0.68
CIRBP-204	ENST00000585630	GAGE6	Q13070	117 aa		10.83	□□□□□ -0.68
CIRBP-204	ENST00000585630	MIA	Q16674	131 aa		10.83	□□□□□ -0.68
CIRBP-204	ENST00000585630	NUP35	Q8NFH5	326 aa		10.83	□□□□□ -0.68
CIRBP-204	ENST00000585630	FAM30A	Q9NZY2	134 aa		10.83	□□□□□ -0.68
CIRBP-204	ENST00000585630	SCO1	O75880	301 aa		10.82	□□□□□ -0.68
CIRBP-204	ENST00000585630	FAT1	Q14517	4588 aa		10.81	□□□□□ -0.68
CIRBP-204	ENST00000585630	FAM229A	H3BQW9	127 aa		10.81	□□□□□ -0.68
CIRBP-204	ENST00000585630	SMR3B	P02814	79 aa	Predicted RBP	10.81	□□□□□ -0.68
CIRBP-204	ENST00000585630	INAFM2	P0DMQ5	153 aa		10.81	□□□□□ -0.68
CIRBP-204	ENST00000585630	S100P	P25815	95 aa		10.81	□□□□□ -0.68
CIRBP-204	ENST00000585630	CLPSL2	Q6UWE3	100 aa		10.81	□□□□□ -0.68
CIRBP-204	ENST00000585630	SMIM15	Q7Z3B0	74 aa		10.81	□□□□□ -0.68
CIRBP-204	ENST00000585630	CBLN2	Q8IUK8	224 aa		10.81	□□□□□ -0.68
CIRBP-204	ENST00000585630	BORCS7	Q96B45	105 aa		10.81	□□□□□ -0.68
CIRBP-204	ENST00000585630	TMEM243	Q9BU79	118 aa		10.81	□□□□□ -0.68
CIRBP-204	ENST00000585630	SMCO4	Q9NRQ5	59 aa		10.81	□□□□□ -0.68
CIRBP-204	ENST00000585630	VPS13B	Q7Z7G8	4022 aa		10.81	□□□□□ -0.68
CIRBP-204	ENST00000585630	HLA-DQA1	P01909	254 aa		10.8	□□□□□ -0.68
CIRBP-204	ENST00000585630	C14orf177	Q52M58	125 aa		10.8	□□□□□ -0.68
CIRBP-204	ENST00000585630	LINC00269	Q8N2A0	174 aa		10.8	□□□□□ -0.68
CIRBP-204	ENST00000585630	GATD1	Q8NB37	220 aa		10.8	□□□□□ -0.68
CIRBP-204	ENST00000585630	TRAV9-1	A0A075B6T8	112 aa		10.79	□□□□□ -0.68
CIRBP-204	ENST00000585630	TRAV26-2	A0A0B4J265	109 aa		10.79	□□□□□ -0.68
CIRBP-204	ENST00000585630		A0A1B0GUT8	65 aa		10.79	□□□□□ -0.68
CIRBP-204	ENST00000585630	COTL1	Q14019	142 aa		10.78	□□□□□ -0.68
CIRBP-204	ENST00000585630	LINC01620	Q4KN68	170 aa		10.78	□□□□□ -0.68
CIRBP-204	ENST00000585630	MRPL54	Q6P161	138 aa	Known RBP	10.78	□□□□□ -0.68
CIRBP-204	ENST00000585630	KRTAP26-1	Q6PEX3	210 aa		10.78	□□□□□ -0.68
CIRBP-204	ENST00000585630	C20orf203	Q8NBC4	194 aa		10.78	□□□□□ -0.68
CIRBP-204	ENST00000585630	DEFB104A	Q8WTQ1	72 aa		10.78	□□□□□ -0.68
CIRBP-204	ENST00000585630	BTF3L4	Q96K17	158 aa		10.78	□□□□□ -0.68
CIRBP-204	ENST00000585630	YPEL4	Q96NS1	127 aa		10.78	□□□□□ -0.68
CIRBP-204	ENST00000585630		A0A1B0GUV1	79 aa		10.77	□□□□□ -0.69
CIRBP-204	ENST00000585630	USP17L23	D6RBM5	183 aa		10.77	□□□□□ -0.69
CIRBP-204	ENST00000585630	AMT	P48728	403 aa		10.77	□□□□□ -0.69
CIRBP-204	ENST00000585630	RIG	Q13278	110 aa		10.77	□□□□□ -0.69
CIRBP-204	ENST00000585630	DNAH8	Q96JB1	4490 aa		10.77	□□□□□ -0.69
CIRBP-204	ENST00000585630		A0A1B0GXF2	115 aa		10.76	□□□□□ -0.69
CIRBP-204	ENST00000585630	REG3A	Q06141	175 aa		10.76	□□□□□ -0.69
CIRBP-204	ENST00000585630	ATP5L2	Q7Z4Y8	100 aa		10.76	□□□□□ -0.69
CIRBP-204	ENST00000585630	RPL39L	Q96EH5	51 aa	Known RBP	10.76	□□□□□ -0.69
CIRBP-204	ENST00000585630	IGLV4-60	A0A075B6I1	120 aa		10.75	□□□□□ -0.69
CIRBP-204	ENST00000585630	TGIF2-C20orf24	A0A0A6YYL0	155 aa		10.75	□□□□□ -0.69
CIRBP-204	ENST00000585630	UBE2L6	O14933	153 aa		10.75	□□□□□ -0.69
CIRBP-204	ENST00000585630	DMBT1	Q9UGM3	2413 aa	Predicted RBP	10.74	□□□□□ -0.69
CIRBP-204	ENST00000585630	TRBV24-1	A0A075B6N3	115 aa		10.74	□□□□□ -0.69
CIRBP-204	ENST00000585630		A0A1B0GW15	77 aa		10.74	□□□□□ -0.69
CIRBP-204	ENST00000585630	TMEM191A	Q9H0A3	160 aa		10.74	□□□□□ -0.69
CIRBP-204	ENST00000585630	IGLV10-54	A0A075B6I4	117 aa		10.73	□□□□□ -0.69
CIRBP-204	ENST00000585630	TRAV8-4	A0A0B4J246	113 aa		10.73	□□□□□ -0.69
CIRBP-204	ENST00000585630	GAS8-AS1	O95177	125 aa		10.73	□□□□□ -0.69
CIRBP-204	ENST00000585630	NCR2	O95944	276 aa		10.73	□□□□□ -0.69
CIRBP-204	ENST00000585630	CAMP	P49913	170 aa		10.73	□□□□□ -0.69
CIRBP-204	ENST00000585630	HBB	P68871	147 aa		10.73	□□□□□ -0.69
CIRBP-204	ENST00000585630	SCX	Q7RTU7	201 aa		10.73	□□□□□ -0.69
CIRBP-204	ENST00000585630	AMN1	Q8IY45	258 aa		10.73	□□□□□ -0.69
CIRBP-204	ENST00000585630	FLG2	Q5D862	2391 aa	Predicted RBP	10.73	□□□□□ -0.69
CIRBP-204	ENST00000585630	TRBV6-5	A0A0K0K1A5	114 aa		10.72	□□□□□ -0.69
CIRBP-204	ENST00000585630	SDHAF1	A6NFY7	115 aa		10.72	□□□□□ -0.69
CIRBP-204	ENST00000585630	S100A8	P05109	93 aa		10.72	□□□□□ -0.69
CIRBP-204	ENST00000585630	PRSS1	P07477	247 aa		10.72	□□□□□ -0.69
CIRBP-204	ENST00000585630	RAB4A	P20338	218 aa		10.72	□□□□□ -0.69
CIRBP-204	ENST00000585630	RNF185	Q96GF1	192 aa		10.72	□□□□□ -0.69
CIRBP-204	ENST00000585630	COLCA2	A8K830	154 aa		10.71	□□□□□ -0.69
CIRBP-204	ENST00000585630	APCS	P02743	223 aa		10.71	□□□□□ -0.69
CIRBP-204	ENST00000585630	CHAC1	Q9BUX1	264 aa		10.71	□□□□□ -0.69

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