RNA–Protein interactions for RNA: ENST00000584374.1

ITGB4-211, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 950 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-211ENST00000584374 LINC00694P0DN24 101 aa11.73□□□□□ -0.53
ITGB4-211ENST00000584374 TMEM70Q9BUB7 260 aa11.73□□□□□ -0.53
ITGB4-211ENST00000584374 SMIM2Q9BVW6 85 aa11.73□□□□□ -0.53
ITGB4-211ENST00000584374 TRAV8-6A0A0B4J262 113 aa11.72□□□□□ -0.53
ITGB4-211ENST00000584374 RTL8CO15255 209 aa11.72□□□□□ -0.53
ITGB4-211ENST00000584374 RPL32P62910 135 aaKnown RBP11.72□□□□□ -0.53
ITGB4-211ENST00000584374 PRSS3P2Q8NHM4 247 aa11.72□□□□□ -0.53
ITGB4-211ENST00000584374 NXT2Q9NPJ8 142 aaKnown RBP11.72□□□□□ -0.53
ITGB4-211ENST00000584374 LINC00588Q9Y4M8 146 aa11.72□□□□□ -0.53
ITGB4-211ENST00000584374 TRBV25-1A0A075B6N4 114 aa11.71□□□□□ -0.53
ITGB4-211ENST00000584374 TRBV27A0A0K0K1C4 114 aa11.71□□□□□ -0.53
ITGB4-211ENST00000584374 AMTP48728 403 aa11.71□□□□□ -0.53
ITGB4-211ENST00000584374 TIRAPP58753 221 aa11.71□□□□□ -0.53
ITGB4-211ENST00000584374 LYPD5Q6UWN5 251 aa11.71□□□□□ -0.53
ITGB4-211ENST00000584374 DYNC1H1Q14204 4646 aaKnown RBP11.7□□□□□ -0.54
ITGB4-211ENST00000584374 IGHV1-24A0A0C4DH33 117 aa11.7□□□□□ -0.54
ITGB4-211ENST00000584374 UBE2L6O14933 153 aa11.7□□□□□ -0.54
ITGB4-211ENST00000584374 POLR2KP53803 58 aaKnown RBP11.7□□□□□ -0.54
ITGB4-211ENST00000584374 RAB5BP61020 215 aa11.7□□□□□ -0.54
ITGB4-211ENST00000584374 LELP1Q5T871 98 aa11.7□□□□□ -0.54
ITGB4-211ENST00000584374 FA2HQ7L5A8 372 aa11.7□□□□□ -0.54
ITGB4-211ENST00000584374 PKD1P98161 4303 aa11.7□□□□□ -0.54
ITGB4-211ENST00000584374 PKHD1P08F94 4074 aa11.69□□□□□ -0.54
ITGB4-211ENST00000584374 C1orf196B1AJZ1 125 aa11.69□□□□□ -0.54
ITGB4-211ENST00000584374 PKIAP61925 76 aa11.69□□□□□ -0.54
ITGB4-211ENST00000584374 Q8N8P6 123 aa11.69□□□□□ -0.54
ITGB4-211ENST00000584374 TRBV6-8A0A0A6YYG3 113 aa11.68□□□□□ -0.54
ITGB4-211ENST00000584374 A0A1B0GVY2 172 aa11.68□□□□□ -0.54
ITGB4-211ENST00000584374 PRSS47A8MTI9 375 aa11.68□□□□□ -0.54
ITGB4-211ENST00000584374 K7EMI3 77 aa11.68□□□□□ -0.54
ITGB4-211ENST00000584374 ESRGQ1W209 222 aa11.68□□□□□ -0.54
ITGB4-211ENST00000584374 TMEM18Q96B42 140 aa11.68□□□□□ -0.54
ITGB4-211ENST00000584374 DNAH11Q96DT5 4516 aa11.67□□□□□ -0.54
ITGB4-211ENST00000584374 G0S2P27469 103 aa11.67□□□□□ -0.54
ITGB4-211ENST00000584374 SMAGPQ0VAQ4 97 aa11.67□□□□□ -0.54
ITGB4-211ENST00000584374 ORMDL2Q53FV1 153 aa11.67□□□□□ -0.54
ITGB4-211ENST00000584374 LINC00336Q6ZUF6 198 aa11.67□□□□□ -0.54
ITGB4-211ENST00000584374 BAGE3Q86Y29 109 aa11.67□□□□□ -0.54
ITGB4-211ENST00000584374 C18orf32Q8TCD1 76 aa11.67□□□□□ -0.54
ITGB4-211ENST00000584374 CHCHD5Q9BSY4 110 aa11.67□□□□□ -0.54
ITGB4-211ENST00000584374 TMEM243Q9BU79 118 aa11.67□□□□□ -0.54
ITGB4-211ENST00000584374 MRPS16Q9Y3D3 137 aaKnown RBP11.67□□□□□ -0.54
ITGB4-211ENST00000584374 IFI27P40305 119 aaPredicted RBP11.66□□□□□ -0.54
ITGB4-211ENST00000584374 TSHBP01222 138 aa11.65□□□□□ -0.54
ITGB4-211ENST00000584374 IQCJQ1A5X6 159 aa11.65□□□□□ -0.54
ITGB4-211ENST00000584374 DEFB104AQ8WTQ1 72 aa11.65□□□□□ -0.54
ITGB4-211ENST00000584374 UPK3BQ9BT76 320 aa11.65□□□□□ -0.54
ITGB4-211ENST00000584374 NBDYA0A0U1RRE5 68 aa11.64□□□□□ -0.55
ITGB4-211ENST00000584374 TMEM262E9PQX1 116 aa11.64□□□□□ -0.55
ITGB4-211ENST00000584374 LAGE3Q14657 143 aa11.64□□□□□ -0.55
ITGB4-211ENST00000584374 RNASEKQ6P5S7 137 aaKnown RBP11.64□□□□□ -0.55
ITGB4-211ENST00000584374 AP5S1Q9NUS5 200 aa11.64□□□□□ -0.55
ITGB4-211ENST00000584374 A0A087WX48 190 aa11.63□□□□□ -0.55
ITGB4-211ENST00000584374 AMMECR1LQ6DCA0 310 aa11.63□□□□□ -0.55
ITGB4-211ENST00000584374 KRTAP1-5Q9BYS1 174 aa11.63□□□□□ -0.55
ITGB4-211ENST00000584374 HERC2O95714 4834 aa11.63□□□□□ -0.55
ITGB4-211ENST00000584374 PRSS29PA6NIE9 313 aa11.62□□□□□ -0.55
ITGB4-211ENST00000584374 H7C423 109 aa11.62□□□□□ -0.55
ITGB4-211ENST00000584374 LINC00614P0C842 121 aa11.62□□□□□ -0.55
ITGB4-211ENST00000584374 Q0VG73 95 aa11.62□□□□□ -0.55
ITGB4-211ENST00000584374 NTM-AS1Q6ZSK4 140 aa11.62□□□□□ -0.55
ITGB4-211ENST00000584374 SIVA1O15304 175 aa11.61□□□□□ -0.55
ITGB4-211ENST00000584374 NIT1Q86X76 327 aa11.61□□□□□ -0.55
ITGB4-211ENST00000584374 CHCHD1Q96BP2 118 aaKnown RBP11.61□□□□□ -0.55
ITGB4-211ENST00000584374 TMEM101Q96IK0 257 aa11.61□□□□□ -0.55
ITGB4-211ENST00000584374 Q9H8V8 135 aa11.61□□□□□ -0.55
ITGB4-211ENST00000584374 TRAV9-2A0A087WT02 112 aa11.6□□□□□ -0.55
ITGB4-211ENST00000584374 LINC01549A6NIU2 74 aa11.6□□□□□ -0.55
ITGB4-211ENST00000584374 HIST1H2BKO60814 126 aa11.6□□□□□ -0.55
ITGB4-211ENST00000584374 HIST1H2BJP06899 126 aa11.6□□□□□ -0.55
ITGB4-211ENST00000584374 BTF3P20290 206 aaKnown RBP11.6□□□□□ -0.55
ITGB4-211ENST00000584374 HIST1H2BOP23527 126 aa11.6□□□□□ -0.55
ITGB4-211ENST00000584374 HIST1H2BBP33778 126 aa11.6□□□□□ -0.55
ITGB4-211ENST00000584374 HIST1H2BDP58876 126 aa11.6□□□□□ -0.55
ITGB4-211ENST00000584374 HIST1H2BCP62807 126 aa11.6□□□□□ -0.55
ITGB4-211ENST00000584374 GAGE6Q13070 117 aa11.6□□□□□ -0.55
ITGB4-211ENST00000584374 HIST2H2BEQ16778 126 aa11.6□□□□□ -0.55
ITGB4-211ENST00000584374 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.6□□□□□ -0.55
ITGB4-211ENST00000584374 C1orf134Q5TEV5 83 aa11.6□□□□□ -0.55
ITGB4-211ENST00000584374 DGAT2L7PQ6IED9 249 aa11.6□□□□□ -0.55
ITGB4-211ENST00000584374 HIST1H2BHQ93079 126 aa11.6□□□□□ -0.55
ITGB4-211ENST00000584374 HIST1H2BNQ99877 126 aa11.6□□□□□ -0.55
ITGB4-211ENST00000584374 HIST1H2BMQ99879 126 aa11.6□□□□□ -0.55
ITGB4-211ENST00000584374 CHCHD7Q9BUK0 85 aa11.6□□□□□ -0.55
ITGB4-211ENST00000584374 KIAA1109Q2LD37 5005 aa11.6□□□□□ -0.55
ITGB4-211ENST00000584374 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.59□□□□□ -0.55
ITGB4-211ENST00000584374 IGKV2-29A2NJV5 120 aaPredicted RBP11.59□□□□□ -0.55
ITGB4-211ENST00000584374 HSBP1O75506 76 aa11.59□□□□□ -0.55
ITGB4-211ENST00000584374 WFDC10BQ8IUB3 73 aa11.59□□□□□ -0.55
ITGB4-211ENST00000584374 CYSLTR1Q9Y271 337 aa11.59□□□□□ -0.55
ITGB4-211ENST00000584374 ESDP10768 282 aa11.58□□□□□ -0.56
ITGB4-211ENST00000584374 C20orf203Q8NBC4 194 aa11.58□□□□□ -0.56
ITGB4-211ENST00000584374 ZNF25P17030 456 aaPredicted RBP11.57□□□□□ -0.56
ITGB4-211ENST00000584374 C10orf126Q8N4M7 172 aa11.57□□□□□ -0.56
ITGB4-211ENST00000584374 LINC01546A6NGU7 62 aa11.56□□□□□ -0.56
ITGB4-211ENST00000584374 IGHV3-30P01768 117 aa11.56□□□□□ -0.56
ITGB4-211ENST00000584374 IGHV3-33P01772 117 aa11.56□□□□□ -0.56
ITGB4-211ENST00000584374 S100A6P06703 90 aa11.56□□□□□ -0.56
ITGB4-211ENST00000584374 IGHV3-30-3P0DP02 117 aa11.56□□□□□ -0.56
ITGB4-211ENST00000584374 IGHV3-30-5P0DP03 117 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms