RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 LINC00299Q6ZSB3 139 aa5□□□□□ -1.61
SMCHD1-210ENST00000583800 Q6ZVQ6 151 aa5□□□□□ -1.61
SMCHD1-210ENST00000583800 ACTR3CQ9C0K3 210 aaPredicted RBP5□□□□□ -1.61
SMCHD1-210ENST00000583800 GEMIN7Q9H840 131 aaKnown RBP5□□□□□ -1.61
SMCHD1-210ENST00000583800 PHLDA3Q9Y5J5 127 aa5□□□□□ -1.61
SMCHD1-210ENST00000583800 TNXBP22105 4242 aa4.99□□□□□ -1.61
SMCHD1-210ENST00000583800 TRBV6-8A0A0A6YYG3 113 aa4.99□□□□□ -1.61
SMCHD1-210ENST00000583800 PTTG1O95997 202 aa4.99□□□□□ -1.61
SMCHD1-210ENST00000583800 SERF2P84101 59 aa4.99□□□□□ -1.61
SMCHD1-210ENST00000583800 ZNF56Q15929 161 aa4.99□□□□□ -1.61
SMCHD1-210ENST00000583800 RNASEKQ6P5S7 137 aaKnown RBP4.99□□□□□ -1.61
SMCHD1-210ENST00000583800 CLPSL2Q6UWE3 100 aa4.99□□□□□ -1.61
SMCHD1-210ENST00000583800 ZFP82Q8N141 532 aa4.99□□□□□ -1.61
SMCHD1-210ENST00000583800 C9orf163Q8N9P6 203 aa4.99□□□□□ -1.61
SMCHD1-210ENST00000583800 OR10G8Q8NGN5 311 aa4.99□□□□□ -1.61
SMCHD1-210ENST00000583800 TNFSF18Q9UNG2 199 aa4.99□□□□□ -1.61
SMCHD1-210ENST00000583800 CTXND1A0A1B0GTU2 59 aa4.98□□□□□ -1.61
SMCHD1-210ENST00000583800 FAM74A7A6NL05 159 aa4.98□□□□□ -1.61
SMCHD1-210ENST00000583800 FAM162BQ5T6X4 162 aa4.98□□□□□ -1.61
SMCHD1-210ENST00000583800 AQP10Q96PS8 301 aa4.98□□□□□ -1.61
SMCHD1-210ENST00000583800 CHCHD5Q9BSY4 110 aa4.98□□□□□ -1.61
SMCHD1-210ENST00000583800 DEFA3P59666 94 aa4.97□□□□□ -1.61
SMCHD1-210ENST00000583800 UBE2G1P62253 170 aa4.97□□□□□ -1.61
SMCHD1-210ENST00000583800 MIAQ16674 131 aa4.97□□□□□ -1.61
SMCHD1-210ENST00000583800 RPL7L1Q6DKI1 246 aaKnown RBP4.97□□□□□ -1.61
SMCHD1-210ENST00000583800 KRTAP26-1Q6PEX3 210 aa4.97□□□□□ -1.61
SMCHD1-210ENST00000583800 NTM-AS1Q6ZSK4 140 aa4.97□□□□□ -1.61
SMCHD1-210ENST00000583800 OR10AG1Q8NH19 301 aa4.97□□□□□ -1.61
SMCHD1-210ENST00000583800 HIST1H2BAQ96A08 127 aa4.97□□□□□ -1.61
SMCHD1-210ENST00000583800 FMC1Q96HJ9 113 aa4.97□□□□□ -1.61
SMCHD1-210ENST00000583800 ZFP30Q9Y2G7 519 aa4.97□□□□□ -1.61
SMCHD1-210ENST00000583800 CSDC2Q9Y534 153 aaKnown RBP4.97□□□□□ -1.61
SMCHD1-210ENST00000583800 ALG5Q9Y673 324 aa4.97□□□□□ -1.61
SMCHD1-210ENST00000583800 LTAP01374 205 aa4.96□□□□□ -1.62
SMCHD1-210ENST00000583800 DEFA1P59665 94 aa4.96□□□□□ -1.62
SMCHD1-210ENST00000583800 RAB4BP61018 213 aa4.96□□□□□ -1.62
SMCHD1-210ENST00000583800 RBX1P62877 108 aa4.96□□□□□ -1.62
SMCHD1-210ENST00000583800 RPL19P84098 196 aaKnown RBP4.96□□□□□ -1.62
SMCHD1-210ENST00000583800 Q5BKY6 102 aa4.96□□□□□ -1.62
SMCHD1-210ENST00000583800 SDIM1Q6ZPB5 146 aa4.96□□□□□ -1.62
SMCHD1-210ENST00000583800 Q6ZRU5 148 aa4.96□□□□□ -1.62
SMCHD1-210ENST00000583800 LINC00269Q8N2A0 174 aa4.96□□□□□ -1.62
SMCHD1-210ENST00000583800 PRR34Q9NV39 138 aa4.96□□□□□ -1.62
SMCHD1-210ENST00000583800 IGLV10-54A0A075B6I4 117 aa4.95□□□□□ -1.62
SMCHD1-210ENST00000583800 A0A0D9SG52 128 aa4.95□□□□□ -1.62
SMCHD1-210ENST00000583800 MUC21A0A0G2JKD1 596 aa4.95□□□□□ -1.62
SMCHD1-210ENST00000583800 MUC21A0A140T8X8 626 aa4.95□□□□□ -1.62
SMCHD1-210ENST00000583800 CHTF8P0CG12 524 aa4.95□□□□□ -1.62
SMCHD1-210ENST00000583800 AKR1C3P42330 323 aa4.95□□□□□ -1.62
SMCHD1-210ENST00000583800 PKIAP61925 76 aa4.95□□□□□ -1.62
SMCHD1-210ENST00000583800 CIRBPQ14011 172 aaKnown RBP4.95□□□□□ -1.62
SMCHD1-210ENST00000583800 FAM74A3Q4VXF1 159 aa4.95□□□□□ -1.62
SMCHD1-210ENST00000583800 NKX6-2Q9C056 277 aaPredicted RBP4.95□□□□□ -1.62
SMCHD1-210ENST00000583800 TRBV25-1A0A075B6N4 114 aa4.94□□□□□ -1.62
SMCHD1-210ENST00000583800 BORCS7-ASMTA0A0B4J1R7 106 aa4.94□□□□□ -1.62
SMCHD1-210ENST00000583800 TRBV6-1A0A0K0K1D8 114 aa4.94□□□□□ -1.62
SMCHD1-210ENST00000583800 MAP1LC3B2A6NCE7 125 aa4.94□□□□□ -1.62
SMCHD1-210ENST00000583800 PRSS2P07478 247 aa4.94□□□□□ -1.62
SMCHD1-210ENST00000583800 REG3AQ06141 175 aa4.94□□□□□ -1.62
SMCHD1-210ENST00000583800 AKR1C8PQ5T2L2 129 aa4.94□□□□□ -1.62
SMCHD1-210ENST00000583800 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.94□□□□□ -1.62
SMCHD1-210ENST00000583800 DERL1Q9BUN8 251 aa4.94□□□□□ -1.62
SMCHD1-210ENST00000583800 ZNF471Q9BX82 626 aaPredicted RBP4.94□□□□□ -1.62
SMCHD1-210ENST00000583800 MAP1LC3BQ9GZQ8 125 aa4.94□□□□□ -1.62
SMCHD1-210ENST00000583800 VAX2Q9UIW0 290 aa4.94□□□□□ -1.62
SMCHD1-210ENST00000583800 IGHV3-64A0A075B6Q5 118 aa4.93□□□□□ -1.62
SMCHD1-210ENST00000583800 A0A087WYN8 130 aa4.93□□□□□ -1.62
SMCHD1-210ENST00000583800 FXYD6-FXYD2A0A087WZ82 144 aa4.93□□□□□ -1.62
SMCHD1-210ENST00000583800 SNAI2O43623 268 aa4.93□□□□□ -1.62
SMCHD1-210ENST00000583800 TSHBP01222 138 aa4.93□□□□□ -1.62
SMCHD1-210ENST00000583800 CXCL1P09341 107 aa4.93□□□□□ -1.62
SMCHD1-210ENST00000583800 CNBPP62633 177 aaKnown RBP4.93□□□□□ -1.62
SMCHD1-210ENST00000583800 TMEM97Q5BJF2 176 aa4.93□□□□□ -1.62
SMCHD1-210ENST00000583800 SPANXN1Q5VSR9 72 aa4.93□□□□□ -1.62
SMCHD1-210ENST00000583800 C20orf203Q8NBC4 194 aa4.93□□□□□ -1.62
SMCHD1-210ENST00000583800 INO80EQ8NBZ0 244 aaPredicted RBP4.93□□□□□ -1.62
SMCHD1-210ENST00000583800 STOML3Q8TAV4 291 aa4.93□□□□□ -1.62
SMCHD1-210ENST00000583800 SPACA4Q8TDM5 124 aa4.93□□□□□ -1.62
SMCHD1-210ENST00000583800 C2orf48Q96LS8 159 aa4.93□□□□□ -1.62
SMCHD1-210ENST00000583800 MED28Q9H204 178 aa4.93□□□□□ -1.62
SMCHD1-210ENST00000583800 IGHV1-24A0A0C4DH33 117 aa4.92□□□□□ -1.62
SMCHD1-210ENST00000583800 PHOX2AO14813 284 aa4.92□□□□□ -1.62
SMCHD1-210ENST00000583800 OR5AL1P0C617 328 aa4.92□□□□□ -1.62
SMCHD1-210ENST00000583800 RAB5CP51148 216 aa4.92□□□□□ -1.62
SMCHD1-210ENST00000583800 IQCJQ1A5X6 159 aa4.92□□□□□ -1.62
SMCHD1-210ENST00000583800 UQCC3Q6UW78 93 aa4.92□□□□□ -1.62
SMCHD1-210ENST00000583800 DPH3Q96FX2 82 aa4.92□□□□□ -1.62
SMCHD1-210ENST00000583800 TCEAL7Q9BRU2 100 aa4.92□□□□□ -1.62
SMCHD1-210ENST00000583800 GFRA4Q9GZZ7 299 aa4.92□□□□□ -1.62
SMCHD1-210ENST00000583800 KIF25-AS1Q9Y6Z4 181 aa4.92□□□□□ -1.62
SMCHD1-210ENST00000583800 IGLV4-60A0A075B6I1 120 aa4.91□□□□□ -1.62
SMCHD1-210ENST00000583800 A0A1B0GV50 99 aa4.91□□□□□ -1.62
SMCHD1-210ENST00000583800 HSBP1L1C9JCN9 74 aa4.91□□□□□ -1.62
SMCHD1-210ENST00000583800 MGPP08493 103 aa4.91□□□□□ -1.62
SMCHD1-210ENST00000583800 GIPP09681 153 aaPredicted RBP4.91□□□□□ -1.62
SMCHD1-210ENST00000583800 SMIM17P0DL12 118 aa4.91□□□□□ -1.62
SMCHD1-210ENST00000583800 AP1S3Q96PC3 154 aa4.91□□□□□ -1.62
SMCHD1-210ENST00000583800 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.9□□□□□ -1.63
SMCHD1-210ENST00000583800 TRAV8-4A0A0B4J246 113 aa4.9□□□□□ -1.63
SMCHD1-210ENST00000583800 P01737 135 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms