RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 PRSS3P2Q8NHM4 247 aa11.32□□□□□ -0.6
CDK5RAP3-228ENST00000583363 NXT2Q9NPJ8 142 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-228ENST00000583363 NIT1Q86X76 327 aa11.31□□□□□ -0.6
CDK5RAP3-228ENST00000583363 GTSF1LQ9H1H1 148 aa11.31□□□□□ -0.6
CDK5RAP3-228ENST00000583363 APLNQ9ULZ1 77 aa11.31□□□□□ -0.6
CDK5RAP3-228ENST00000583363 LYPD5Q6UWN5 251 aa11.3□□□□□ -0.6
CDK5RAP3-228ENST00000583363 DEFB104AQ8WTQ1 72 aa11.3□□□□□ -0.6
CDK5RAP3-228ENST00000583363 URB1-AS1Q96HZ7 61 aa11.3□□□□□ -0.6
CDK5RAP3-228ENST00000583363 LINC01546A6NGU7 62 aa11.29□□□□□ -0.6
CDK5RAP3-228ENST00000583363 TSHBP01222 138 aa11.29□□□□□ -0.6
CDK5RAP3-228ENST00000583363 LINC00614P0C842 121 aa11.29□□□□□ -0.6
CDK5RAP3-228ENST00000583363 TCTAP57738 103 aa11.29□□□□□ -0.6
CDK5RAP3-228ENST00000583363 RAB5BP61020 215 aa11.29□□□□□ -0.6
CDK5RAP3-228ENST00000583363 COTL1Q14019 142 aa11.29□□□□□ -0.6
CDK5RAP3-228ENST00000583363 TMEM97Q5BJF2 176 aa11.29□□□□□ -0.6
CDK5RAP3-228ENST00000583363 NTM-AS1Q6ZSK4 140 aa11.29□□□□□ -0.6
CDK5RAP3-228ENST00000583363 BAGE3Q86Y29 109 aa11.29□□□□□ -0.6
CDK5RAP3-228ENST00000583363 KIR2DL4Q99706 377 aa11.29□□□□□ -0.6
CDK5RAP3-228ENST00000583363 TCAPO15273 167 aa11.28□□□□□ -0.6
CDK5RAP3-228ENST00000583363 TIRAPP58753 221 aa11.28□□□□□ -0.6
CDK5RAP3-228ENST00000583363 ESRGQ1W209 222 aa11.28□□□□□ -0.6
CDK5RAP3-228ENST00000583363 FA2HQ7L5A8 372 aa11.28□□□□□ -0.6
CDK5RAP3-228ENST00000583363 KRTAP17-1Q9BYP8 105 aa11.28□□□□□ -0.6
CDK5RAP3-228ENST00000583363 K7EMI3 77 aa11.27□□□□□ -0.61
CDK5RAP3-228ENST00000583363 TRBV6-8A0A0A6YYG3 113 aa11.26□□□□□ -0.61
CDK5RAP3-228ENST00000583363 FCER1GP30273 86 aa11.26□□□□□ -0.61
CDK5RAP3-228ENST00000583363 NDUFA6P56556 154 aa11.26□□□□□ -0.61
CDK5RAP3-228ENST00000583363 LAGE3Q14657 143 aa11.26□□□□□ -0.61
CDK5RAP3-228ENST00000583363 ESDP10768 282 aa11.25□□□□□ -0.61
CDK5RAP3-228ENST00000583363 LINC00310P59036 64 aa11.25□□□□□ -0.61
CDK5RAP3-228ENST00000583363 COA6Q5JTJ3 125 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-228ENST00000583363 LELP1Q5T871 98 aa11.25□□□□□ -0.61
CDK5RAP3-228ENST00000583363 CHCHD1Q96BP2 118 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-228ENST00000583363 CHCHD7Q9BUK0 85 aa11.25□□□□□ -0.61
CDK5RAP3-228ENST00000583363 IGHV1-24A0A0C4DH33 117 aa11.24□□□□□ -0.61
CDK5RAP3-228ENST00000583363 NUPR1O60356 82 aa11.24□□□□□ -0.61
CDK5RAP3-228ENST00000583363 ORMDL2Q53FV1 153 aa11.24□□□□□ -0.61
CDK5RAP3-228ENST00000583363 RNASEKQ6P5S7 137 aaKnown RBP11.24□□□□□ -0.61
CDK5RAP3-228ENST00000583363 AP5S1Q9NUS5 200 aa11.24□□□□□ -0.61
CDK5RAP3-228ENST00000583363 TRBV25-1A0A075B6N4 114 aa11.23□□□□□ -0.61
CDK5RAP3-228ENST00000583363 SERF1AO75920 110 aa11.23□□□□□ -0.61
CDK5RAP3-228ENST00000583363 AMTP48728 403 aa11.23□□□□□ -0.61
CDK5RAP3-228ENST00000583363 CCL18P55774 89 aa11.22□□□□□ -0.61
CDK5RAP3-228ENST00000583363 FRAS1Q86XX4 4008 aa11.22□□□□□ -0.61
CDK5RAP3-228ENST00000583363 TMEM243Q9BU79 118 aa11.22□□□□□ -0.61
CDK5RAP3-228ENST00000583363 LINC00588Q9Y4M8 146 aa11.22□□□□□ -0.61
CDK5RAP3-228ENST00000583363 C20orf203Q8NBC4 194 aa11.21□□□□□ -0.61
CDK5RAP3-228ENST00000583363 G0S2P27469 103 aa11.2□□□□□ -0.62
CDK5RAP3-228ENST00000583363 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.19□□□□□ -0.62
CDK5RAP3-228ENST00000583363 TRAV8-6A0A0B4J262 113 aa11.19□□□□□ -0.62
CDK5RAP3-228ENST00000583363 IGKV2-29A2NJV5 120 aaPredicted RBP11.19□□□□□ -0.62
CDK5RAP3-228ENST00000583363 H7C423 109 aa11.19□□□□□ -0.62
CDK5RAP3-228ENST00000583363 HSBP1O75506 76 aa11.19□□□□□ -0.62
CDK5RAP3-228ENST00000583363 CHCHD5Q9BSY4 110 aa11.19□□□□□ -0.62
CDK5RAP3-228ENST00000583363 MRPS16Q9Y3D3 137 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-228ENST00000583363 A0A096LNJ9 63 aa11.18□□□□□ -0.62
CDK5RAP3-228ENST00000583363 S100A6P06703 90 aa11.18□□□□□ -0.62
CDK5RAP3-228ENST00000583363 BTF3P20290 206 aaKnown RBP11.18□□□□□ -0.62
CDK5RAP3-228ENST00000583363 PMCHL1Q16048 86 aa11.18□□□□□ -0.62
CDK5RAP3-228ENST00000583363 C2orf66Q6UXQ4 117 aa11.18□□□□□ -0.62
CDK5RAP3-228ENST00000583363 TMEM18Q96B42 140 aa11.18□□□□□ -0.62
CDK5RAP3-228ENST00000583363 UBE2L6O14933 153 aa11.17□□□□□ -0.62
CDK5RAP3-228ENST00000583363 RPL39P62891 51 aaKnown RBP11.17□□□□□ -0.62
CDK5RAP3-228ENST00000583363 GAGE6Q13070 117 aa11.17□□□□□ -0.62
CDK5RAP3-228ENST00000583363 FAM19A2Q8N3H0 131 aa11.17□□□□□ -0.62
CDK5RAP3-228ENST00000583363 TOMM6Q96B49 74 aa11.17□□□□□ -0.62
CDK5RAP3-228ENST00000583363 UPK3BQ9BT76 320 aa11.17□□□□□ -0.62
CDK5RAP3-228ENST00000583363 CYSLTR1Q9Y271 337 aa11.17□□□□□ -0.62
CDK5RAP3-228ENST00000583363 TMA7Q9Y2S6 64 aaKnown RBP11.17□□□□□ -0.62
CDK5RAP3-228ENST00000583363 VPS13DQ5THJ4 4388 aa11.17□□□□□ -0.62
CDK5RAP3-228ENST00000583363 TMEM262E9PQX1 116 aa11.16□□□□□ -0.62
CDK5RAP3-228ENST00000583363 HBDP02042 147 aa11.16□□□□□ -0.62
CDK5RAP3-228ENST00000583363 LINC00476Q8WZB0 136 aa11.16□□□□□ -0.62
CDK5RAP3-228ENST00000583363 HERC2O95714 4834 aa11.15□□□□□ -0.62
CDK5RAP3-228ENST00000583363 LINC01549A6NIU2 74 aa11.15□□□□□ -0.62
CDK5RAP3-228ENST00000583363 FGF6P10767 208 aa11.15□□□□□ -0.62
CDK5RAP3-228ENST00000583363 SNRPEP62304 92 aaKnown RBP11.15□□□□□ -0.62
CDK5RAP3-228ENST00000583363 PDZD11Q5EBL8 140 aa11.15□□□□□ -0.62
CDK5RAP3-228ENST00000583363 MRPL52Q86TS9 123 aaKnown RBP11.15□□□□□ -0.62
CDK5RAP3-228ENST00000583363 WFDC10BQ8IUB3 73 aa11.15□□□□□ -0.62
CDK5RAP3-228ENST00000583363 TIMM21Q9BVV7 248 aa11.15□□□□□ -0.62
CDK5RAP3-228ENST00000583363 UBE2D4Q9Y2X8 147 aa11.15□□□□□ -0.62
CDK5RAP3-228ENST00000583363 A0A1B0GUV1 79 aa11.14□□□□□ -0.63
CDK5RAP3-228ENST00000583363 C5orf52A6NGY3 159 aa11.14□□□□□ -0.63
CDK5RAP3-228ENST00000583363 IGIPA6NJ69 53 aa11.14□□□□□ -0.63
CDK5RAP3-228ENST00000583363 PKIAP61925 76 aa11.14□□□□□ -0.63
CDK5RAP3-228ENST00000583363 UBE2DNLQ8IWF7 75 aa11.14□□□□□ -0.63
CDK5RAP3-228ENST00000583363 PYGO1Q9Y3Y4 419 aa11.14□□□□□ -0.63
CDK5RAP3-228ENST00000583363 KMT2AQ03164 3969 aa11.13□□□□□ -0.63
CDK5RAP3-228ENST00000583363 SMAGPQ0VAQ4 97 aa11.13□□□□□ -0.63
CDK5RAP3-228ENST00000583363 SCGB3A1Q96QR1 104 aa11.13□□□□□ -0.63
CDK5RAP3-228ENST00000583363 CSDC2Q9Y534 153 aaKnown RBP11.13□□□□□ -0.63
CDK5RAP3-228ENST00000583363 SIVA1O15304 175 aa11.12□□□□□ -0.63
CDK5RAP3-228ENST00000583363 DNAH10OSP0CZ25 163 aa11.12□□□□□ -0.63
CDK5RAP3-228ENST00000583363 ZNF25P17030 456 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP3-228ENST00000583363 RBX1P62877 108 aa11.12□□□□□ -0.63
CDK5RAP3-228ENST00000583363 MPV17L2Q567V2 206 aa11.12□□□□□ -0.63
CDK5RAP3-228ENST00000583363 AMMECR1LQ6DCA0 310 aa11.12□□□□□ -0.63
CDK5RAP3-228ENST00000583363 LGALS9CQ6DKI2 356 aa11.12□□□□□ -0.63
CDK5RAP3-228ENST00000583363 ERASQ7Z444 233 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms