RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 TWIST1Q15672 202 aa7.99□□□□□ -1.13
TOP3A-215ENST00000583328 ANAPC16Q96DE5 110 aa7.99□□□□□ -1.13
TOP3A-215ENST00000583328 NAT8BQ9UHF3 227 aa7.99□□□□□ -1.13
TOP3A-215ENST00000583328 CARHSP1Q9Y2V2 147 aaKnown RBP7.99□□□□□ -1.13
TOP3A-215ENST00000583328 URGCP-MRPS24S4R325 110 aa7.99□□□□□ -1.13
TOP3A-215ENST00000583328 A0A087WWC5 75 aa7.98□□□□□ -1.13
TOP3A-215ENST00000583328 A0A1B0GUT8 65 aa7.98□□□□□ -1.13
TOP3A-215ENST00000583328 C14orf178Q8N769 122 aaPredicted RBP7.98□□□□□ -1.13
TOP3A-215ENST00000583328 NUP35Q8NFH5 326 aa7.98□□□□□ -1.13
TOP3A-215ENST00000583328 DNAJC30Q96LL9 226 aa7.98□□□□□ -1.13
TOP3A-215ENST00000583328 KLK12Q9UKR0 248 aa7.98□□□□□ -1.13
TOP3A-215ENST00000583328 KIF25-AS1Q9Y6Z4 181 aa7.98□□□□□ -1.13
TOP3A-215ENST00000583328 RAB4BP61018 213 aa7.97□□□□□ -1.13
TOP3A-215ENST00000583328 ZNF56Q15929 161 aa7.97□□□□□ -1.13
TOP3A-215ENST00000583328 C14orf177Q52M58 125 aa7.97□□□□□ -1.13
TOP3A-215ENST00000583328 UBE2WQ96B02 151 aa7.97□□□□□ -1.13
TOP3A-215ENST00000583328 DPH3P1Q9H4G8 78 aa7.97□□□□□ -1.13
TOP3A-215ENST00000583328 RIGQ13278 110 aa7.96□□□□□ -1.14
TOP3A-215ENST00000583328 Q6ZRU5 148 aa7.96□□□□□ -1.14
TOP3A-215ENST00000583328 SMIM15Q7Z3B0 74 aa7.96□□□□□ -1.14
TOP3A-215ENST00000583328 NIT1Q86X76 327 aa7.96□□□□□ -1.14
TOP3A-215ENST00000583328 F5H697 171 aa7.95□□□□□ -1.14
TOP3A-215ENST00000583328 MGPP08493 103 aa7.95□□□□□ -1.14
TOP3A-215ENST00000583328 LINC00694P0DN24 101 aa7.95□□□□□ -1.14
TOP3A-215ENST00000583328 ELOBQ15370 118 aa7.95□□□□□ -1.14
TOP3A-215ENST00000583328 NDUFA5Q16718 116 aa7.95□□□□□ -1.14
TOP3A-215ENST00000583328 KCNIP4Q6PIL6 250 aa7.95□□□□□ -1.14
TOP3A-215ENST00000583328 CTDSP1Q9GZU7 261 aa7.95□□□□□ -1.14
TOP3A-215ENST00000583328 A0A087WX48 190 aa7.94□□□□□ -1.14
TOP3A-215ENST00000583328 TRBV10-1A0A0K0K1A3 114 aa7.94□□□□□ -1.14
TOP3A-215ENST00000583328 A0A1B0GW15 77 aa7.94□□□□□ -1.14
TOP3A-215ENST00000583328 RHEBQ15382 184 aa7.94□□□□□ -1.14
TOP3A-215ENST00000583328 CLRN3Q8NCR9 226 aa7.94□□□□□ -1.14
TOP3A-215ENST00000583328 Q9UF83 564 aa7.94□□□□□ -1.14
TOP3A-215ENST00000583328 C7orf77A4D0Y5 90 aa7.93□□□□□ -1.14
TOP3A-215ENST00000583328 H7C1H1 209 aa7.93□□□□□ -1.14
TOP3A-215ENST00000583328 APOC3P02656 99 aa7.93□□□□□ -1.14
TOP3A-215ENST00000583328 Q0VG73 95 aa7.93□□□□□ -1.14
TOP3A-215ENST00000583328 SUMO4Q6EEV6 95 aa7.93□□□□□ -1.14
TOP3A-215ENST00000583328 ATP5L2Q7Z4Y8 100 aa7.93□□□□□ -1.14
TOP3A-215ENST00000583328 IMMP2LQ96T52 175 aa7.93□□□□□ -1.14
TOP3A-215ENST00000583328 TMEM191AQ9H0A3 160 aa7.93□□□□□ -1.14
TOP3A-215ENST00000583328 TMEM242Q9NWH2 141 aa7.93□□□□□ -1.14
TOP3A-215ENST00000583328 SNAPINO95295 136 aa7.92□□□□□ -1.14
TOP3A-215ENST00000583328 S100A8P05109 93 aa7.92□□□□□ -1.14
TOP3A-215ENST00000583328 RPL36AP83881 106 aaKnown RBP7.92□□□□□ -1.14
TOP3A-215ENST00000583328 MRPL54Q6P161 138 aaKnown RBP7.92□□□□□ -1.14
TOP3A-215ENST00000583328 SLC7A5P1Q8MH63 180 aa7.92□□□□□ -1.14
TOP3A-215ENST00000583328 SVBPQ8N300 66 aa7.92□□□□□ -1.14
TOP3A-215ENST00000583328 RPL36ALQ969Q0 106 aaKnown RBP7.92□□□□□ -1.14
TOP3A-215ENST00000583328 C1orf43Q9BWL3 253 aa7.92□□□□□ -1.14
TOP3A-215ENST00000583328 RNF213Q63HN8 5207 aa7.92□□□□□ -1.14
TOP3A-215ENST00000583328 LRP2P98164 4655 aa7.91□□□□□ -1.14
TOP3A-215ENST00000583328 TRBV7-3A0A075B6L6 115 aa7.91□□□□□ -1.14
TOP3A-215ENST00000583328 A0A1B0GXF2 115 aa7.91□□□□□ -1.14
TOP3A-215ENST00000583328 M0QY20 66 aa7.91□□□□□ -1.14
TOP3A-215ENST00000583328 HBBP68871 147 aa7.91□□□□□ -1.14
TOP3A-215ENST00000583328 ATRAIDQ6UW56 229 aa7.91□□□□□ -1.14
TOP3A-215ENST00000583328 NEXN-AS1Q8NBZ9 246 aa7.91□□□□□ -1.14
TOP3A-215ENST00000583328 CHCHD7Q9BUK0 85 aa7.91□□□□□ -1.14
TOP3A-215ENST00000583328 TRAV9-1A0A075B6T8 112 aa7.9□□□□□ -1.14
TOP3A-215ENST00000583328 USP17L23D6RBM5 183 aa7.9□□□□□ -1.14
TOP3A-215ENST00000583328 TMEM262E9PQX1 116 aa7.9□□□□□ -1.14
TOP3A-215ENST00000583328 CAMPP49913 170 aa7.9□□□□□ -1.14
TOP3A-215ENST00000583328 UBE2D3P61077 147 aa7.9□□□□□ -1.14
TOP3A-215ENST00000583328 UBE2D2P62837 147 aa7.9□□□□□ -1.14
TOP3A-215ENST00000583328 RASL11AQ6T310 242 aa7.9□□□□□ -1.14
TOP3A-215ENST00000583328 BTF3L4Q96K17 158 aa7.9□□□□□ -1.14
TOP3A-215ENST00000583328 RPS10P5Q9NQ39 176 aa7.9□□□□□ -1.14
TOP3A-215ENST00000583328 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.9□□□□□ -1.14
TOP3A-215ENST00000583328 TNXBP22105 4242 aa7.9□□□□□ -1.15
TOP3A-215ENST00000583328 CRPP02741 224 aa7.89□□□□□ -1.15
TOP3A-215ENST00000583328 S100PP25815 95 aa7.89□□□□□ -1.15
TOP3A-215ENST00000583328 DGAT2L7PQ6IED9 249 aa7.89□□□□□ -1.15
TOP3A-215ENST00000583328 AMN1Q8IY45 258 aa7.89□□□□□ -1.15
TOP3A-215ENST00000583328 C9orf163Q8N9P6 203 aa7.89□□□□□ -1.15
TOP3A-215ENST00000583328 GATD1Q8NB37 220 aa7.89□□□□□ -1.15
TOP3A-215ENST00000583328 TRAV26-2A0A0B4J265 109 aa7.88□□□□□ -1.15
TOP3A-215ENST00000583328 PRSS1P07477 247 aa7.88□□□□□ -1.15
TOP3A-215ENST00000583328 RAB4AP20338 218 aa7.88□□□□□ -1.15
TOP3A-215ENST00000583328 FAM104BQ5XKR9 115 aa7.88□□□□□ -1.15
TOP3A-215ENST00000583328 ENHOQ6UWT2 76 aa7.88□□□□□ -1.15
TOP3A-215ENST00000583328 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.88□□□□□ -1.15
TOP3A-215ENST00000583328 MRAP2Q96G30 205 aa7.88□□□□□ -1.15
TOP3A-215ENST00000583328 RNF185Q96GF1 192 aa7.88□□□□□ -1.15
TOP3A-215ENST00000583328 NIT2Q9NQR4 276 aa7.88□□□□□ -1.15
TOP3A-215ENST00000583328 PANO1I0J062 215 aa7.87□□□□□ -1.15
TOP3A-215ENST00000583328 HLA-DQA1P01909 254 aa7.87□□□□□ -1.15
TOP3A-215ENST00000583328 DPH3Q96FX2 82 aa7.87□□□□□ -1.15
TOP3A-215ENST00000583328 SDIM1Q6ZPB5 146 aa7.86□□□□□ -1.15
TOP3A-215ENST00000583328 RPL39LQ96EH5 51 aaKnown RBP7.86□□□□□ -1.15
TOP3A-215ENST00000583328 PPP1R17O96001 155 aa7.85□□□□□ -1.15
TOP3A-215ENST00000583328 ANGP03950 147 aaKnown RBP7.85□□□□□ -1.15
TOP3A-215ENST00000583328 MRPL51Q4U2R6 128 aaKnown RBP7.85□□□□□ -1.15
TOP3A-215ENST00000583328 TMEM97Q5BJF2 176 aa7.85□□□□□ -1.15
TOP3A-215ENST00000583328 TRBV6-5A0A0K0K1A5 114 aa7.84□□□□□ -1.15
TOP3A-215ENST00000583328 NCR2O95944 276 aa7.84□□□□□ -1.15
TOP3A-215ENST00000583328 SMKR1H3BMG3 65 aa7.83□□□□□ -1.16
TOP3A-215ENST00000583328 GAS8-AS1O95177 125 aa7.83□□□□□ -1.16
TOP3A-215ENST00000583328 PPBPP02775 128 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms