RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 SCN3BQ9NY72 215 aa-0.38□□□□□ -2.47
SMARCE1-219ENST00000583294 M0R3E3 92 aa-0.39□□□□□ -2.47
SMARCE1-219ENST00000583294 KMT2AQ03164 3969 aa-0.39□□□□□ -2.47
SMARCE1-219ENST00000583294 MYOM3Q5VTT5 1437 aa-0.39□□□□□ -2.47
SMARCE1-219ENST00000583294 MYCBP2O75592 4640 aa-0.4□□□□□ -2.47
SMARCE1-219ENST00000583294 PPP1R17O96001 155 aa-0.4□□□□□ -2.47
SMARCE1-219ENST00000583294 HIST1H1DP16402 221 aaKnown RBP-0.4□□□□□ -2.47
SMARCE1-219ENST00000583294 CCL18P55774 89 aa-0.4□□□□□ -2.47
SMARCE1-219ENST00000583294 DPH3Q96FX2 82 aa-0.4□□□□□ -2.47
SMARCE1-219ENST00000583294 CCDC167Q9P0B6 97 aa-0.4□□□□□ -2.47
SMARCE1-219ENST00000583294 ZNF609O15014 1411 aa-0.4□□□□□ -2.47
SMARCE1-219ENST00000583294 IFT140Q96RY7 1462 aa-0.41□□□□□ -2.47
SMARCE1-219ENST00000583294 NHSL1Q5SYE7 1610 aa-0.41□□□□□ -2.47
SMARCE1-219ENST00000583294 PDCD10Q9BUL8 212 aa-0.41□□□□□ -2.48
SMARCE1-219ENST00000583294 TENM4Q6N022 2769 aa-0.41□□□□□ -2.48
SMARCE1-219ENST00000583294 PRDM2Q13029 1718 aa-0.41□□□□□ -2.48
SMARCE1-219ENST00000583294 TRAV22A0A0B4J277 110 aa-0.42□□□□□ -2.48
SMARCE1-219ENST00000583294 HCG22E2RYF7 251 aa-0.42□□□□□ -2.48
SMARCE1-219ENST00000583294 RBM3P98179 157 aaKnown RBP-0.42□□□□□ -2.48
SMARCE1-219ENST00000583294 WNK3Q9BYP7 1800 aa-0.43□□□□□ -2.48
SMARCE1-219ENST00000583294 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.43□□□□□ -2.48
SMARCE1-219ENST00000583294 SIX6O95475 246 aa-0.43□□□□□ -2.48
SMARCE1-219ENST00000583294 WFDC2Q14508 124 aa-0.43□□□□□ -2.48
SMARCE1-219ENST00000583294 HSPG2P98160 4391 aa-0.44□□□□□ -2.48
SMARCE1-219ENST00000583294 PI4KAP42356 2102 aa-0.44□□□□□ -2.48
SMARCE1-219ENST00000583294 LRP2P98164 4655 aa-0.44□□□□□ -2.48
SMARCE1-219ENST00000583294 TRAV13-2A0A0B4J235 113 aa-0.44□□□□□ -2.48
SMARCE1-219ENST00000583294 ARPC4P59998 168 aa-0.44□□□□□ -2.48
SMARCE1-219ENST00000583294 R4GMQ9 66 aa-0.44□□□□□ -2.48
SMARCE1-219ENST00000583294 PLXNB2O15031 1838 aa-0.45□□□□□ -2.48
SMARCE1-219ENST00000583294 GRIN2AQ12879 1464 aa-0.45□□□□□ -2.48
SMARCE1-219ENST00000583294 DEFB109BQ30KR1 87 aa-0.45□□□□□ -2.48
SMARCE1-219ENST00000583294 C10orf128Q5T292 105 aa-0.45□□□□□ -2.48
SMARCE1-219ENST00000583294 AQP10Q96PS8 301 aa-0.45□□□□□ -2.48
SMARCE1-219ENST00000583294 LPAP08519 4548 aa-0.45□□□□□ -2.48
SMARCE1-219ENST00000583294 MRC1P22897 1456 aa-0.46□□□□□ -2.48
SMARCE1-219ENST00000583294 PXDNQ92626 1479 aa-0.47□□□□□ -2.48
SMARCE1-219ENST00000583294 DOCK1Q14185 1865 aa-0.47□□□□□ -2.48
SMARCE1-219ENST00000583294 CTXND1A0A1B0GTU2 59 aa-0.47□□□□□ -2.48
SMARCE1-219ENST00000583294 M0R135 149 aa-0.47□□□□□ -2.48
SMARCE1-219ENST00000583294 MUC12Q9UKN1 5478 aa-0.47□□□□□ -2.49
SMARCE1-219ENST00000583294 KDM3BQ7LBC6 1761 aa-0.47□□□□□ -2.49
SMARCE1-219ENST00000583294 SPTBN1Q01082 2364 aaKnown RBP-0.48□□□□□ -2.49
SMARCE1-219ENST00000583294 HAMPP81172 84 aa-0.48□□□□□ -2.49
SMARCE1-219ENST00000583294 SPCS1Q9Y6A9 102 aa-0.48□□□□□ -2.49
SMARCE1-219ENST00000583294 ARAP2Q8WZ64 1704 aa-0.48□□□□□ -2.49
SMARCE1-219ENST00000583294 CHD6Q8TD26 2715 aa-0.48□□□□□ -2.49
SMARCE1-219ENST00000583294 STAB1Q9NY15 2570 aa-0.49□□□□□ -2.49
SMARCE1-219ENST00000583294 PIGBOS1A0A0B4J2F0 54 aa-0.49□□□□□ -2.49
SMARCE1-219ENST00000583294 SPAARA0A1B0GVQ0 90 aa-0.49□□□□□ -2.49
SMARCE1-219ENST00000583294 BCE1O60756 84 aa-0.49□□□□□ -2.49
SMARCE1-219ENST00000583294 SPRR2DP22532 72 aa-0.49□□□□□ -2.49
SMARCE1-219ENST00000583294 TTC9CQ8N5M4 171 aa-0.49□□□□□ -2.49
SMARCE1-219ENST00000583294 COPS9Q8WXC6 57 aa-0.49□□□□□ -2.49
SMARCE1-219ENST00000583294 LSM10Q969L4 123 aaKnown RBP-0.49□□□□□ -2.49
SMARCE1-219ENST00000583294 PATJQ8NI35 1801 aa-0.5□□□□□ -2.49
SMARCE1-219ENST00000583294 SPAG11BQ08648 103 aa-0.5□□□□□ -2.49
SMARCE1-219ENST00000583294 Q5VSD8 79 aa-0.5□□□□□ -2.49
SMARCE1-219ENST00000583294 SPAG11AQ6PDA7 123 aa-0.5□□□□□ -2.49
SMARCE1-219ENST00000583294 Q8IZM0 81 aa-0.5□□□□□ -2.49
SMARCE1-219ENST00000583294 SMIM4Q8WVI0 70 aa-0.5□□□□□ -2.49
SMARCE1-219ENST00000583294 AGPAT4-IT1Q9H0P7 198 aa-0.5□□□□□ -2.49
SMARCE1-219ENST00000583294 PAIP2BQ9ULR5 123 aaKnown RBP-0.5□□□□□ -2.49
SMARCE1-219ENST00000583294 BICRAQ9NZM4 1560 aa-0.5□□□□□ -2.49
SMARCE1-219ENST00000583294 ZNF236Q9UL36 1845 aa-0.5□□□□□ -2.49
SMARCE1-219ENST00000583294 USF3Q68DE3 2245 aa-0.5□□□□□ -2.49
SMARCE1-219ENST00000583294 Q8N8P6 123 aa-0.51□□□□□ -2.49
SMARCE1-219ENST00000583294 PKD1L1Q8TDX9 2849 aa-0.51□□□□□ -2.49
SMARCE1-219ENST00000583294 DOCK2Q92608 1830 aa-0.52□□□□□ -2.49
SMARCE1-219ENST00000583294 PPRC1Q5VV67 1664 aaKnown RBP-0.52□□□□□ -2.49
SMARCE1-219ENST00000583294 LRP6O75581 1613 aa-0.52□□□□□ -2.49
SMARCE1-219ENST00000583294 ZANQ9Y493 2812 aa-0.52□□□□□ -2.49
SMARCE1-219ENST00000583294 V9GYH0 126 aa-0.52□□□□□ -2.49
SMARCE1-219ENST00000583294 CFTRP13569 1480 aa-0.53□□□□□ -2.49
SMARCE1-219ENST00000583294 FAM25AB3EWG3 89 aa-0.53□□□□□ -2.49
SMARCE1-219ENST00000583294 FAM25CB3EWG5 89 aa-0.53□□□□□ -2.49
SMARCE1-219ENST00000583294 FAM25GB3EWG6 89 aa-0.53□□□□□ -2.49
SMARCE1-219ENST00000583294 LENEPQ9Y5L5 61 aa-0.53□□□□□ -2.49
SMARCE1-219ENST00000583294 FLNAP21333 2647 aaKnown RBP-0.53□□□□□ -2.49
SMARCE1-219ENST00000583294 ERCC6L2Q5T890 1561 aa-0.53□□□□□ -2.49
SMARCE1-219ENST00000583294 C12orf73Q69YU5 71 aa-0.54□□□□□ -2.5
SMARCE1-219ENST00000583294 SERP1Q9Y6X1 66 aa-0.54□□□□□ -2.5
SMARCE1-219ENST00000583294 VWFP04275 2813 aa-0.55□□□□□ -2.5
SMARCE1-219ENST00000583294 LAMC1P11047 1609 aa-0.55□□□□□ -2.5
SMARCE1-219ENST00000583294 PRM1P04553 51 aa-0.55□□□□□ -2.5
SMARCE1-219ENST00000583294 SPRR1AP35321 89 aa-0.55□□□□□ -2.5
SMARCE1-219ENST00000583294 ARL11Q969Q4 196 aa-0.55□□□□□ -2.5
SMARCE1-219ENST00000583294 RERGLQ9H628 205 aa-0.55□□□□□ -2.5
SMARCE1-219ENST00000583294 MUC2Q02817 5179 aa-0.55□□□□□ -2.5
SMARCE1-219ENST00000583294 ALMS1Q8TCU4 4167 aa-0.55□□□□□ -2.5
SMARCE1-219ENST00000583294 PPIP5K1Q6PFW1 1433 aa-0.55□□□□□ -2.5
SMARCE1-219ENST00000583294 GNG7O60262 68 aa-0.56□□□□□ -2.5
SMARCE1-219ENST00000583294 S100A3P33764 101 aa-0.56□□□□□ -2.5
SMARCE1-219ENST00000583294 Q6AWC8 147 aa-0.56□□□□□ -2.5
SMARCE1-219ENST00000583294 MYH7P12883 1935 aa-0.57□□□□□ -2.5
SMARCE1-219ENST00000583294 LINC00470Q9BZP3 86 aa-0.57□□□□□ -2.5
SMARCE1-219ENST00000583294 MYO7BQ6PIF6 2116 aa-0.58□□□□□ -2.5
SMARCE1-219ENST00000583294 LRRC37A2A6NM11 1700 aa-0.58□□□□□ -2.5
SMARCE1-219ENST00000583294 PHLPP1O60346 1717 aa-0.58□□□□□ -2.5
SMARCE1-219ENST00000583294 SRRM2Q9UQ35 2752 aaKnown RBP-0.58□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms