RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 LINC01587Q99440 93 aa10.04□□□□□ -0.8
SRSF1-205ENST00000582730 TMEM238LA0A1B0GVL6 79 aa10.03□□□□□ -0.8
SRSF1-205ENST00000582730 A6NJY4 79 aa10.03□□□□□ -0.8
SRSF1-205ENST00000582730 HELZ2Q9BYK8 2649 aaKnown RBP10.03□□□□□ -0.8
SRSF1-205ENST00000582730 IGHV3OR16-12A0A075B7B8 117 aa10.03□□□□□ -0.8
SRSF1-205ENST00000582730 J3QKU1 62 aa10.03□□□□□ -0.8
SRSF1-205ENST00000582730 TRPT1Q86TN4 253 aaKnown RBP10.03□□□□□ -0.8
SRSF1-205ENST00000582730 ITPR2Q14571 2701 aa10.02□□□□□ -0.8
SRSF1-205ENST00000582730 PLA2G2AP14555 144 aa10.02□□□□□ -0.81
SRSF1-205ENST00000582730 PROK1P58294 105 aa10.02□□□□□ -0.81
SRSF1-205ENST00000582730 UBE2D3P61077 147 aa10.02□□□□□ -0.81
SRSF1-205ENST00000582730 UBE2D2P62837 147 aa10.02□□□□□ -0.81
SRSF1-205ENST00000582730 CCL24O00175 119 aa10.02□□□□□ -0.81
SRSF1-205ENST00000582730 P0DMU3 169 aa10.02□□□□□ -0.81
SRSF1-205ENST00000582730 FAM231AP0DMU4 169 aa10.02□□□□□ -0.81
SRSF1-205ENST00000582730 FAM231CP0DMU5 169 aa10.02□□□□□ -0.81
SRSF1-205ENST00000582730 CITED2Q99967 270 aaPredicted RBP10.02□□□□□ -0.81
SRSF1-205ENST00000582730 TRBV27A0A0K0K1C4 114 aa10.01□□□□□ -0.81
SRSF1-205ENST00000582730 PPDPFLQ8WWR9 84 aa10.01□□□□□ -0.81
SRSF1-205ENST00000582730 XCL2Q9UBD3 114 aa10.01□□□□□ -0.81
SRSF1-205ENST00000582730 TSHBP01222 138 aa10.01□□□□□ -0.81
SRSF1-205ENST00000582730 RPL32P62910 135 aaKnown RBP10.01□□□□□ -0.81
SRSF1-205ENST00000582730 TEN1Q86WV5 123 aa10.01□□□□□ -0.81
SRSF1-205ENST00000582730 CUBNO60494 3623 aa10□□□□□ -0.81
SRSF1-205ENST00000582730 TRBV6-5A0A0K0K1A5 114 aa10□□□□□ -0.81
SRSF1-205ENST00000582730 TCL1BO95988 128 aa10□□□□□ -0.81
SRSF1-205ENST00000582730 OPRPNQ99935 248 aaPredicted RBP10□□□□□ -0.81
SRSF1-205ENST00000582730 IGIPA6NJ69 53 aa10□□□□□ -0.81
SRSF1-205ENST00000582730 ZNF415Q09FC8 603 aa10□□□□□ -0.81
SRSF1-205ENST00000582730 PMVKQ15126 192 aa10□□□□□ -0.81
SRSF1-205ENST00000582730 RNF183Q96D59 192 aa10□□□□□ -0.81
SRSF1-205ENST00000582730 TRAV2A0A0B4J234 112 aa9.99□□□□□ -0.81
SRSF1-205ENST00000582730 C11orf86A6NJI1 115 aa9.99□□□□□ -0.81
SRSF1-205ENST00000582730 INSP01308 110 aa9.99□□□□□ -0.81
SRSF1-205ENST00000582730 NDUFA11Q86Y39 141 aa9.99□□□□□ -0.81
SRSF1-205ENST00000582730 STHQ8IWL8 128 aa9.99□□□□□ -0.81
SRSF1-205ENST00000582730 TMEM170BQ5T4T1 132 aa9.99□□□□□ -0.81
SRSF1-205ENST00000582730 M0R2P5 195 aa9.98□□□□□ -0.81
SRSF1-205ENST00000582730 I3L3M4 83 aa9.98□□□□□ -0.81
SRSF1-205ENST00000582730 KRTAP1-1Q07627 177 aa9.98□□□□□ -0.81
SRSF1-205ENST00000582730 ODF3L2Q3SX64 289 aa9.98□□□□□ -0.81
SRSF1-205ENST00000582730 ERG28Q9UKR5 140 aa9.98□□□□□ -0.81
SRSF1-205ENST00000582730 LINC01006Q8NI28 216 aa9.98□□□□□ -0.81
SRSF1-205ENST00000582730 TMEM141Q96I45 108 aa9.98□□□□□ -0.81
SRSF1-205ENST00000582730 FASNP49327 2511 aaKnown RBP9.97□□□□□ -0.81
SRSF1-205ENST00000582730 LYRM7Q5U5X0 104 aa9.97□□□□□ -0.81
SRSF1-205ENST00000582730 TNFRSF18Q9Y5U5 241 aa9.97□□□□□ -0.81
SRSF1-205ENST00000582730 PDZD2O15018 2839 aa9.97□□□□□ -0.81
SRSF1-205ENST00000582730 A0A0J9YY99 117 aa9.97□□□□□ -0.81
SRSF1-205ENST00000582730 TIMM17AQ99595 171 aa9.97□□□□□ -0.81
SRSF1-205ENST00000582730 NOTCH2Q04721 2471 aa9.97□□□□□ -0.81
SRSF1-205ENST00000582730 IGLV4-69A0A075B6H9 119 aa9.96□□□□□ -0.81
SRSF1-205ENST00000582730 A8MWV9 139 aa9.96□□□□□ -0.81
SRSF1-205ENST00000582730 JMJD1CQ15652 2540 aa9.96□□□□□ -0.81
SRSF1-205ENST00000582730 HERVK_113P61574 105 aa9.96□□□□□ -0.82
SRSF1-205ENST00000582730 UNC79Q9P2D8 2635 aa9.96□□□□□ -0.82
SRSF1-205ENST00000582730 A8MTW9 85 aa9.96□□□□□ -0.82
SRSF1-205ENST00000582730 CFC1BP0CG36 223 aa9.96□□□□□ -0.82
SRSF1-205ENST00000582730 CFC1P0CG37 223 aa9.96□□□□□ -0.82
SRSF1-205ENST00000582730 RHOHQ15669 191 aa9.96□□□□□ -0.82
SRSF1-205ENST00000582730 SBSPONQ8IVN8 264 aa9.96□□□□□ -0.82
SRSF1-205ENST00000582730 SMR3AQ99954 134 aa9.96□□□□□ -0.82
SRSF1-205ENST00000582730 Q9UF83 564 aa9.96□□□□□ -0.82
SRSF1-205ENST00000582730 TRBV20-1A0A075B6N2 111 aa9.95□□□□□ -0.82
SRSF1-205ENST00000582730 NSUN5P1Q3KNT7 163 aa9.95□□□□□ -0.82
SRSF1-205ENST00000582730 ANKRD29Q8N6D5 301 aa9.95□□□□□ -0.82
SRSF1-205ENST00000582730 C20orf203Q8NBC4 194 aa9.95□□□□□ -0.82
SRSF1-205ENST00000582730 ANAPC13Q9BS18 74 aa9.95□□□□□ -0.82
SRSF1-205ENST00000582730 SCGB1C2P0DMR2 95 aa9.94□□□□□ -0.82
SRSF1-205ENST00000582730 VCX2Q9H322 139 aa9.94□□□□□ -0.82
SRSF1-205ENST00000582730 NACAE9PAV3 2078 aa9.94□□□□□ -0.82
SRSF1-205ENST00000582730 PAPPA-AS1Q5QFB9 102 aa9.94□□□□□ -0.82
SRSF1-205ENST00000582730 Q6ZSN1 163 aa9.94□□□□□ -0.82
SRSF1-205ENST00000582730 HIVEP2P31629 2446 aa9.94□□□□□ -0.82
SRSF1-205ENST00000582730 AKAP9Q99996 3911 aa9.93□□□□□ -0.82
SRSF1-205ENST00000582730 IGHV3-38A0A0C4DH36 116 aa9.93□□□□□ -0.82
SRSF1-205ENST00000582730 IGHV3-30P01768 117 aa9.93□□□□□ -0.82
SRSF1-205ENST00000582730 IGHV3-30-5P0DP03 117 aa9.93□□□□□ -0.82
SRSF1-205ENST00000582730 C10orf126Q8N4M7 172 aa9.93□□□□□ -0.82
SRSF1-205ENST00000582730 ZNRF2Q8NHG8 242 aa9.93□□□□□ -0.82
SRSF1-205ENST00000582730 NIPBLQ6KC79 2804 aaeCLIP9.93□□□□□ -0.82
SRSF1-205ENST00000582730 IGHV3-64A0A075B6Q5 118 aa9.93□□□□□ -0.82
SRSF1-205ENST00000582730 RNASE1P07998 156 aaKnown RBP9.93□□□□□ -0.82
SRSF1-205ENST00000582730 TSPEAR-AS2P59090 65 aa9.93□□□□□ -0.82
SRSF1-205ENST00000582730 HECTD1Q9ULT8 2610 aa9.93□□□□□ -0.82
SRSF1-205ENST00000582730 RNASE13Q5GAN3 156 aaKnown RBP9.93□□□□□ -0.82
SRSF1-205ENST00000582730 ZFAND6Q6FIF0 208 aa9.93□□□□□ -0.82
SRSF1-205ENST00000582730 CEMP1Q6PRD7 247 aaPredicted RBP9.93□□□□□ -0.82
SRSF1-205ENST00000582730 TRAV25A0A0B4J276 109 aa9.92□□□□□ -0.82
SRSF1-205ENST00000582730 C11orf72Q8NBR9 251 aa9.92□□□□□ -0.82
SRSF1-205ENST00000582730 WFDC10AQ9H1F0 79 aa9.92□□□□□ -0.82
SRSF1-205ENST00000582730 SS18L2Q9UHA2 77 aa9.92□□□□□ -0.82
SRSF1-205ENST00000582730 TRGV1A0A0A0MS02 117 aa9.92□□□□□ -0.82
SRSF1-205ENST00000582730 SLC25A29Q8N8R3 303 aa9.92□□□□□ -0.82
SRSF1-205ENST00000582730 PRO1854Q9UHT4 67 aa9.92□□□□□ -0.82
SRSF1-205ENST00000582730 IGHV3-53P01767 116 aa9.91□□□□□ -0.82
SRSF1-205ENST00000582730 CFAP161Q6P656 301 aa9.91□□□□□ -0.82
SRSF1-205ENST00000582730 TMEM262E9PQX1 116 aa9.91□□□□□ -0.82
SRSF1-205ENST00000582730 SLC25A20O43772 301 aa9.9□□□□□ -0.82
SRSF1-205ENST00000582730 RPL35AP18077 110 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms