RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 TIRAPP58753 221 aa6.08□□□□□ -1.44
PDLIM1P3-201ENST00000582370 SUMO2P61956 95 aaKnown RBP6.08□□□□□ -1.44
PDLIM1P3-201ENST00000582370 GTSF1LQ9H1H1 148 aa6.08□□□□□ -1.44
PDLIM1P3-201ENST00000582370 TRBV27A0A0K0K1C4 114 aa6.07□□□□□ -1.44
PDLIM1P3-201ENST00000582370 I3L3M4 83 aa6.07□□□□□ -1.44
PDLIM1P3-201ENST00000582370 SCO1O75880 301 aa6.07□□□□□ -1.44
PDLIM1P3-201ENST00000582370 TNFRSF6BO95407 300 aa6.07□□□□□ -1.44
PDLIM1P3-201ENST00000582370 HOXA5P20719 270 aa6.07□□□□□ -1.44
PDLIM1P3-201ENST00000582370 NEGR1Q7Z3B1 354 aa6.07□□□□□ -1.44
PDLIM1P3-201ENST00000582370 TMEM18Q96B42 140 aa6.07□□□□□ -1.44
PDLIM1P3-201ENST00000582370 ALKBH7Q9BT30 221 aaPredicted RBP6.07□□□□□ -1.44
PDLIM1P3-201ENST00000582370 JPT2Q9H910 190 aa6.07□□□□□ -1.44
PDLIM1P3-201ENST00000582370 SRRM2Q9UQ35 2752 aaKnown RBP6.07□□□□□ -1.44
PDLIM1P3-201ENST00000582370 IGHV3-73A0A0B4J1V6 119 aa6.06□□□□□ -1.44
PDLIM1P3-201ENST00000582370 H7C423 109 aa6.06□□□□□ -1.44
PDLIM1P3-201ENST00000582370 K7EP13 123 aa6.06□□□□□ -1.44
PDLIM1P3-201ENST00000582370 TRGC2P03986 189 aa6.06□□□□□ -1.44
PDLIM1P3-201ENST00000582370 HTN3P15516 51 aa6.06□□□□□ -1.44
PDLIM1P3-201ENST00000582370 Q0VG73 95 aa6.06□□□□□ -1.44
PDLIM1P3-201ENST00000582370 ORMDL2Q53FV1 153 aa6.06□□□□□ -1.44
PDLIM1P3-201ENST00000582370 NRACQ8N912 160 aa6.06□□□□□ -1.44
PDLIM1P3-201ENST00000582370 FLG2Q5D862 2391 aaPredicted RBP6.06□□□□□ -1.44
PDLIM1P3-201ENST00000582370 SDHAF1A6NFY7 115 aa6.05□□□□□ -1.44
PDLIM1P3-201ENST00000582370 GYPEP15421 78 aa6.05□□□□□ -1.44
PDLIM1P3-201ENST00000582370 POLR2KP53803 58 aaKnown RBP6.05□□□□□ -1.44
PDLIM1P3-201ENST00000582370 UBE2D3P61077 147 aa6.05□□□□□ -1.44
PDLIM1P3-201ENST00000582370 UBE2D2P62837 147 aa6.05□□□□□ -1.44
PDLIM1P3-201ENST00000582370 COTL1Q14019 142 aa6.05□□□□□ -1.44
PDLIM1P3-201ENST00000582370 NEXN-AS1Q8NBZ9 246 aa6.05□□□□□ -1.44
PDLIM1P3-201ENST00000582370 ATP6V0E2Q8NHE4 81 aa6.05□□□□□ -1.44
PDLIM1P3-201ENST00000582370 ZNRF2Q8NHG8 242 aa6.05□□□□□ -1.44
PDLIM1P3-201ENST00000582370 PRSS3P2Q8NHM4 247 aa6.05□□□□□ -1.44
PDLIM1P3-201ENST00000582370 CHCHD1Q96BP2 118 aaKnown RBP6.05□□□□□ -1.44
PDLIM1P3-201ENST00000582370 SMIM2Q9BVW6 85 aa6.05□□□□□ -1.44
PDLIM1P3-201ENST00000582370 TRBV25-1A0A075B6N4 114 aa6.04□□□□□ -1.44
PDLIM1P3-201ENST00000582370 NPSP0C0P6 89 aa6.04□□□□□ -1.44
PDLIM1P3-201ENST00000582370 LINC00694P0DN24 101 aa6.04□□□□□ -1.44
PDLIM1P3-201ENST00000582370 FCER1GP30273 86 aa6.04□□□□□ -1.44
PDLIM1P3-201ENST00000582370 CCL18P55774 89 aa6.04□□□□□ -1.44
PDLIM1P3-201ENST00000582370 SPATA12Q7Z6I5 190 aa6.04□□□□□ -1.44
PDLIM1P3-201ENST00000582370 Q8N8P6 123 aa6.04□□□□□ -1.44
PDLIM1P3-201ENST00000582370 VSIG2Q96IQ7 327 aa6.04□□□□□ -1.44
PDLIM1P3-201ENST00000582370 TMEM70Q9BUB7 260 aa6.04□□□□□ -1.44
PDLIM1P3-201ENST00000582370 AP5S1Q9NUS5 200 aa6.04□□□□□ -1.44
PDLIM1P3-201ENST00000582370 TRAV8-6A0A0B4J262 113 aa6.03□□□□□ -1.44
PDLIM1P3-201ENST00000582370 TRAV26-2A0A0B4J265 109 aa6.03□□□□□ -1.44
PDLIM1P3-201ENST00000582370 LINC01546A6NGU7 62 aa6.03□□□□□ -1.44
PDLIM1P3-201ENST00000582370 NPYP01303 97 aa6.03□□□□□ -1.44
PDLIM1P3-201ENST00000582370 LINC00614P0C842 121 aa6.03□□□□□ -1.44
PDLIM1P3-201ENST00000582370 FA2HQ7L5A8 372 aa6.03□□□□□ -1.44
PDLIM1P3-201ENST00000582370 BAGE3Q86Y29 109 aa6.03□□□□□ -1.44
PDLIM1P3-201ENST00000582370 C6orf223Q8N319 242 aa6.03□□□□□ -1.44
PDLIM1P3-201ENST00000582370 C18orf32Q8TCD1 76 aa6.03□□□□□ -1.44
PDLIM1P3-201ENST00000582370 CHCHD7Q9BUK0 85 aa6.03□□□□□ -1.44
PDLIM1P3-201ENST00000582370 IGHV1-24A0A0C4DH33 117 aa6.02□□□□□ -1.45
PDLIM1P3-201ENST00000582370 A0A0J9YY99 117 aa6.02□□□□□ -1.45
PDLIM1P3-201ENST00000582370 GAGE12JA6NER3 117 aa6.02□□□□□ -1.45
PDLIM1P3-201ENST00000582370 S100A6P06703 90 aa6.02□□□□□ -1.45
PDLIM1P3-201ENST00000582370 GAGE1Q13065 139 aa6.02□□□□□ -1.45
PDLIM1P3-201ENST00000582370 GAGE4Q13068 117 aa6.02□□□□□ -1.45
PDLIM1P3-201ENST00000582370 GAGE5Q13069 117 aa6.02□□□□□ -1.45
PDLIM1P3-201ENST00000582370 LAGE3Q14657 143 aa6.02□□□□□ -1.45
PDLIM1P3-201ENST00000582370 IQCJQ1A5X6 159 aa6.02□□□□□ -1.45
PDLIM1P3-201ENST00000582370 KIAA1644Q3SXP7 199 aa6.02□□□□□ -1.45
PDLIM1P3-201ENST00000582370 GAGE13Q4V321 117 aa6.02□□□□□ -1.45
PDLIM1P3-201ENST00000582370 PAPPA-AS1Q5QFB9 102 aa6.02□□□□□ -1.45
PDLIM1P3-201ENST00000582370 LELP1Q5T871 98 aa6.02□□□□□ -1.45
PDLIM1P3-201ENST00000582370 Q5VSD8 79 aa6.02□□□□□ -1.45
PDLIM1P3-201ENST00000582370 Q6ZSN1 163 aa6.02□□□□□ -1.45
PDLIM1P3-201ENST00000582370 RPL39LQ96EH5 51 aaKnown RBP6.02□□□□□ -1.45
PDLIM1P3-201ENST00000582370 A0A096LPF7 62 aa6.01□□□□□ -1.45
PDLIM1P3-201ENST00000582370 TRBV6-8A0A0A6YYG3 113 aa6.01□□□□□ -1.45
PDLIM1P3-201ENST00000582370 J3QL48 77 aa6.01□□□□□ -1.45
PDLIM1P3-201ENST00000582370 UBE2L6O14933 153 aa6.01□□□□□ -1.45
PDLIM1P3-201ENST00000582370 HIST1H2BKO60814 126 aa6.01□□□□□ -1.45
PDLIM1P3-201ENST00000582370 NUDT3O95989 172 aa6.01□□□□□ -1.45
PDLIM1P3-201ENST00000582370 HIST1H2BJP06899 126 aa6.01□□□□□ -1.45
PDLIM1P3-201ENST00000582370 ZNF25P17030 456 aaPredicted RBP6.01□□□□□ -1.45
PDLIM1P3-201ENST00000582370 HIST1H2BOP23527 126 aa6.01□□□□□ -1.45
PDLIM1P3-201ENST00000582370 HIST1H2BBP33778 126 aa6.01□□□□□ -1.45
PDLIM1P3-201ENST00000582370 HIST1H2BDP58876 126 aa6.01□□□□□ -1.45
PDLIM1P3-201ENST00000582370 HIST1H2BCP62807 126 aa6.01□□□□□ -1.45
PDLIM1P3-201ENST00000582370 HIST2H2BEQ16778 126 aa6.01□□□□□ -1.45
PDLIM1P3-201ENST00000582370 COA6Q5JTJ3 125 aaKnown RBP6.01□□□□□ -1.45
PDLIM1P3-201ENST00000582370 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.01□□□□□ -1.45
PDLIM1P3-201ENST00000582370 HIST1H2BHQ93079 126 aa6.01□□□□□ -1.45
PDLIM1P3-201ENST00000582370 PACRGQ96M98 296 aaPredicted RBP6.01□□□□□ -1.45
PDLIM1P3-201ENST00000582370 HIST1H2BNQ99877 126 aa6.01□□□□□ -1.45
PDLIM1P3-201ENST00000582370 HIST1H2BMQ99879 126 aa6.01□□□□□ -1.45
PDLIM1P3-201ENST00000582370 SMKR1H3BMG3 65 aa6□□□□□ -1.45
PDLIM1P3-201ENST00000582370 HSBP1O75506 76 aa6□□□□□ -1.45
PDLIM1P3-201ENST00000582370 ESDP10768 282 aa6□□□□□ -1.45
PDLIM1P3-201ENST00000582370 BTF3P20290 206 aaKnown RBP6□□□□□ -1.45
PDLIM1P3-201ENST00000582370 AMTP48728 403 aa6□□□□□ -1.45
PDLIM1P3-201ENST00000582370 AKR1D1P51857 326 aa6□□□□□ -1.45
PDLIM1P3-201ENST00000582370 LYPD5Q6UWN5 251 aa6□□□□□ -1.45
PDLIM1P3-201ENST00000582370 UPK3BQ9BT76 320 aa6□□□□□ -1.45
PDLIM1P3-201ENST00000582370 TMEM243Q9BU79 118 aa6□□□□□ -1.45
PDLIM1P3-201ENST00000582370 TIMM21Q9BVV7 248 aa6□□□□□ -1.45
PDLIM1P3-201ENST00000582370 CSDC2Q9Y534 153 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms