RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 HIST1H2BJP06899 126 aa6.53□□□□□ -1.36
RFFL-210ENST00000582308 ESDP10768 282 aa6.53□□□□□ -1.36
RFFL-210ENST00000582308 HIST1H2BOP23527 126 aa6.53□□□□□ -1.36
RFFL-210ENST00000582308 HIST1H2BBP33778 126 aa6.53□□□□□ -1.36
RFFL-210ENST00000582308 CCL18P55774 89 aa6.53□□□□□ -1.36
RFFL-210ENST00000582308 HIST1H2BDP58876 126 aa6.53□□□□□ -1.36
RFFL-210ENST00000582308 HIST1H2BCP62807 126 aa6.53□□□□□ -1.36
RFFL-210ENST00000582308 Q0VG73 95 aa6.53□□□□□ -1.36
RFFL-210ENST00000582308 HIST2H2BEQ16778 126 aa6.53□□□□□ -1.36
RFFL-210ENST00000582308 TMEM97Q5BJF2 176 aa6.53□□□□□ -1.36
RFFL-210ENST00000582308 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.53□□□□□ -1.36
RFFL-210ENST00000582308 NIT1Q86X76 327 aa6.53□□□□□ -1.36
RFFL-210ENST00000582308 PRSS3P2Q8NHM4 247 aa6.53□□□□□ -1.36
RFFL-210ENST00000582308 HIST1H2BHQ93079 126 aa6.53□□□□□ -1.36
RFFL-210ENST00000582308 HIST1H2BNQ99877 126 aa6.53□□□□□ -1.36
RFFL-210ENST00000582308 HIST1H2BMQ99879 126 aa6.53□□□□□ -1.36
RFFL-210ENST00000582308 CHCHD7Q9BUK0 85 aa6.53□□□□□ -1.36
RFFL-210ENST00000582308 MRPS16Q9Y3D3 137 aaKnown RBP6.53□□□□□ -1.36
RFFL-210ENST00000582308 TRBV25-1A0A075B6N4 114 aa6.52□□□□□ -1.37
RFFL-210ENST00000582308 C1orf196B1AJZ1 125 aa6.52□□□□□ -1.37
RFFL-210ENST00000582308 FCER1GP30273 86 aa6.52□□□□□ -1.37
RFFL-210ENST00000582308 AMTP48728 403 aa6.52□□□□□ -1.37
RFFL-210ENST00000582308 TMEM243Q9BU79 118 aa6.52□□□□□ -1.37
RFFL-210ENST00000582308 DNAH6Q9C0G6 4158 aa6.51□□□□□ -1.37
RFFL-210ENST00000582308 TRAV8-6A0A0B4J262 113 aa6.51□□□□□ -1.37
RFFL-210ENST00000582308 LINC00614P0C842 121 aa6.51□□□□□ -1.37
RFFL-210ENST00000582308 LINC00310P59036 64 aa6.51□□□□□ -1.37
RFFL-210ENST00000582308 FA2HQ7L5A8 372 aa6.51□□□□□ -1.37
RFFL-210ENST00000582308 BAGE3Q86Y29 109 aa6.51□□□□□ -1.37
RFFL-210ENST00000582308 WFDC10BQ8IUB3 73 aa6.51□□□□□ -1.37
RFFL-210ENST00000582308 UBE2DNLQ8IWF7 75 aa6.51□□□□□ -1.37
RFFL-210ENST00000582308 UPK3BQ9BT76 320 aa6.51□□□□□ -1.37
RFFL-210ENST00000582308 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.5□□□□□ -1.37
RFFL-210ENST00000582308 IGKV2-29A2NJV5 120 aaPredicted RBP6.5□□□□□ -1.37
RFFL-210ENST00000582308 K7EMI3 77 aa6.5□□□□□ -1.37
RFFL-210ENST00000582308 NUPR1O60356 82 aa6.5□□□□□ -1.37
RFFL-210ENST00000582308 RAB5BP61020 215 aa6.5□□□□□ -1.37
RFFL-210ENST00000582308 GAGE6Q13070 117 aa6.5□□□□□ -1.37
RFFL-210ENST00000582308 LAGE3Q14657 143 aa6.5□□□□□ -1.37
RFFL-210ENST00000582308 LGALS9CQ6DKI2 356 aa6.5□□□□□ -1.37
RFFL-210ENST00000582308 RNASEKQ6P5S7 137 aaKnown RBP6.5□□□□□ -1.37
RFFL-210ENST00000582308 Q8N3U1 123 aa6.5□□□□□ -1.37
RFFL-210ENST00000582308 C20orf203Q8NBC4 194 aa6.5□□□□□ -1.37
RFFL-210ENST00000582308 CHCHD5Q9BSY4 110 aa6.5□□□□□ -1.37
RFFL-210ENST00000582308 AP5S1Q9NUS5 200 aa6.5□□□□□ -1.37
RFFL-210ENST00000582308 SERF1AO75920 110 aa6.49□□□□□ -1.37
RFFL-210ENST00000582308 RPL39P62891 51 aaKnown RBP6.49□□□□□ -1.37
RFFL-210ENST00000582308 ORMDL2Q53FV1 153 aa6.49□□□□□ -1.37
RFFL-210ENST00000582308 LINC00476Q8WZB0 136 aa6.49□□□□□ -1.37
RFFL-210ENST00000582308 A0A096LNJ9 63 aa6.48□□□□□ -1.37
RFFL-210ENST00000582308 TMEM262E9PQX1 116 aa6.48□□□□□ -1.37
RFFL-210ENST00000582308 H7C423 109 aa6.48□□□□□ -1.37
RFFL-210ENST00000582308 SIVA1O15304 175 aa6.48□□□□□ -1.37
RFFL-210ENST00000582308 DNAH10OSP0CZ25 163 aa6.48□□□□□ -1.37
RFFL-210ENST00000582308 FGF6P10767 208 aa6.48□□□□□ -1.37
RFFL-210ENST00000582308 PMCHL1Q16048 86 aa6.48□□□□□ -1.37
RFFL-210ENST00000582308 MPV17L2Q567V2 206 aa6.48□□□□□ -1.37
RFFL-210ENST00000582308 CHCHD1Q96BP2 118 aaKnown RBP6.48□□□□□ -1.37
RFFL-210ENST00000582308 Q9H8V8 135 aa6.48□□□□□ -1.37
RFFL-210ENST00000582308 UBE2L6O14933 153 aa6.47□□□□□ -1.37
RFFL-210ENST00000582308 LY6G6CO95867 125 aa6.47□□□□□ -1.37
RFFL-210ENST00000582308 IGHV3-30P01768 117 aa6.47□□□□□ -1.37
RFFL-210ENST00000582308 IGHV3-33P01772 117 aa6.47□□□□□ -1.37
RFFL-210ENST00000582308 IGHV3-30-3P0DP02 117 aa6.47□□□□□ -1.37
RFFL-210ENST00000582308 IGHV3-30-5P0DP03 117 aa6.47□□□□□ -1.37
RFFL-210ENST00000582308 BTF3P20290 206 aaKnown RBP6.47□□□□□ -1.37
RFFL-210ENST00000582308 NDUFA6P56556 154 aa6.47□□□□□ -1.37
RFFL-210ENST00000582308 RBX1P62877 108 aa6.47□□□□□ -1.37
RFFL-210ENST00000582308 LINC01556Q5JQF7 62 aa6.47□□□□□ -1.37
RFFL-210ENST00000582308 COA6Q5JTJ3 125 aaKnown RBP6.47□□□□□ -1.37
RFFL-210ENST00000582308 C2orf66Q6UXQ4 117 aa6.47□□□□□ -1.37
RFFL-210ENST00000582308 MRPL52Q86TS9 123 aaKnown RBP6.47□□□□□ -1.37
RFFL-210ENST00000582308 Q8N976 141 aa6.47□□□□□ -1.37
RFFL-210ENST00000582308 TOMM6Q96B49 74 aa6.47□□□□□ -1.37
RFFL-210ENST00000582308 KMT2AQ03164 3969 aa6.47□□□□□ -1.37
RFFL-210ENST00000582308 SACSQ9NZJ4 4579 aa6.47□□□□□ -1.37
RFFL-210ENST00000582308 IGLV4-60A0A075B6I1 120 aa6.46□□□□□ -1.38
RFFL-210ENST00000582308 A0A087WX48 190 aa6.46□□□□□ -1.38
RFFL-210ENST00000582308 A0A1B0GUV1 79 aa6.46□□□□□ -1.38
RFFL-210ENST00000582308 PKIAP61925 76 aa6.46□□□□□ -1.38
RFFL-210ENST00000582308 FAM19A2Q8N3H0 131 aa6.46□□□□□ -1.38
RFFL-210ENST00000582308 FAM104AQ969W3 186 aa6.46□□□□□ -1.38
RFFL-210ENST00000582308 TMEM18Q96B42 140 aa6.46□□□□□ -1.38
RFFL-210ENST00000582308 TIMM21Q9BVV7 248 aa6.46□□□□□ -1.38
RFFL-210ENST00000582308 CYSLTR1Q9Y271 337 aa6.46□□□□□ -1.38
RFFL-210ENST00000582308 UBE2D4Q9Y2X8 147 aa6.46□□□□□ -1.38
RFFL-210ENST00000582308 IGIPA6NJ69 53 aa6.45□□□□□ -1.38
RFFL-210ENST00000582308 HSBP1O75506 76 aa6.45□□□□□ -1.38
RFFL-210ENST00000582308 HBDP02042 147 aa6.45□□□□□ -1.38
RFFL-210ENST00000582308 G0S2P27469 103 aa6.45□□□□□ -1.38
RFFL-210ENST00000582308 AMMECR1LQ6DCA0 310 aa6.45□□□□□ -1.38
RFFL-210ENST00000582308 OPRPNQ99935 248 aaPredicted RBP6.45□□□□□ -1.38
RFFL-210ENST00000582308 PYGO1Q9Y3Y4 419 aa6.45□□□□□ -1.38
RFFL-210ENST00000582308 CSDC2Q9Y534 153 aaKnown RBP6.45□□□□□ -1.38
RFFL-210ENST00000582308 ZNF25P17030 456 aaPredicted RBP6.44□□□□□ -1.38
RFFL-210ENST00000582308 PDZD11Q5EBL8 140 aa6.44□□□□□ -1.38
RFFL-210ENST00000582308 OR5A1Q8NGJ0 315 aa6.44□□□□□ -1.38
RFFL-210ENST00000582308 SCGB3A1Q96QR1 104 aa6.44□□□□□ -1.38
RFFL-210ENST00000582308 KRTAP1-5Q9BYS1 174 aa6.44□□□□□ -1.38
RFFL-210ENST00000582308 CDC42SE2Q9NRR3 84 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms