RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 LGALS9BQ3B8N2 356 aa4.42□□□□□ -1.7
PTPRM-213ENST00000580949 C16orf74Q96GX8 76 aa4.42□□□□□ -1.7
PTPRM-213ENST00000580949 ZNF479Q96JC4 524 aa4.42□□□□□ -1.7
PTPRM-213ENST00000580949 EDA2RQ9HAV5 297 aa4.42□□□□□ -1.7
PTPRM-213ENST00000580949 NOTCH1P46531 2555 aa4.41□□□□□ -1.7
PTPRM-213ENST00000580949 TRBV27A0A0K0K1C4 114 aa4.41□□□□□ -1.7
PTPRM-213ENST00000580949 SDHAF1A6NFY7 115 aa4.41□□□□□ -1.7
PTPRM-213ENST00000580949 SMIM9A6NGZ8 99 aa4.41□□□□□ -1.7
PTPRM-213ENST00000580949 SYS1-DBNDD2H3BUS1 97 aa4.41□□□□□ -1.7
PTPRM-213ENST00000580949 RHODO00212 210 aa4.41□□□□□ -1.7
PTPRM-213ENST00000580949 VCYO14598 125 aa4.41□□□□□ -1.7
PTPRM-213ENST00000580949 DEFB4AO15263 64 aa4.41□□□□□ -1.7
PTPRM-213ENST00000580949 GAGE7O76087 117 aa4.41□□□□□ -1.7
PTPRM-213ENST00000580949 TSHBP01222 138 aa4.41□□□□□ -1.7
PTPRM-213ENST00000580949 GAGE12FP0CL80 117 aa4.41□□□□□ -1.7
PTPRM-213ENST00000580949 GAGE12GP0CL81 117 aa4.41□□□□□ -1.7
PTPRM-213ENST00000580949 GAGE12IP0CL82 117 aa4.41□□□□□ -1.7
PTPRM-213ENST00000580949 ZFP2Q6ZN57 461 aa4.41□□□□□ -1.7
PTPRM-213ENST00000580949 LINC00612Q8N6U2 182 aa4.41□□□□□ -1.7
PTPRM-213ENST00000580949 OR4C5Q8NGB2 326 aa4.41□□□□□ -1.7
PTPRM-213ENST00000580949 OR11H2Q8NH07 326 aa4.41□□□□□ -1.7
PTPRM-213ENST00000580949 RNF183Q96D59 192 aa4.41□□□□□ -1.7
PTPRM-213ENST00000580949 NDUFAF3Q9BU61 184 aa4.41□□□□□ -1.7
PTPRM-213ENST00000580949 TM2D2Q9BX73 214 aa4.41□□□□□ -1.7
PTPRM-213ENST00000580949 HSPB8Q9UJY1 196 aa4.41□□□□□ -1.7
PTPRM-213ENST00000580949 CMYA5Q8N3K9 4069 aa4.4□□□□□ -1.7
PTPRM-213ENST00000580949 TRAV4A0A0B4J268 109 aa4.4□□□□□ -1.71
PTPRM-213ENST00000580949 IGHV4-28A0A0C4DH34 117 aa4.4□□□□□ -1.71
PTPRM-213ENST00000580949 PET117Q6UWS5 81 aa4.4□□□□□ -1.71
PTPRM-213ENST00000580949 TEX43Q6ZNM6 134 aa4.4□□□□□ -1.71
PTPRM-213ENST00000580949 NEXN-AS1Q8NBZ9 246 aa4.4□□□□□ -1.71
PTPRM-213ENST00000580949 C18orf15Q96N68 181 aa4.4□□□□□ -1.71
PTPRM-213ENST00000580949 TNFRSF18Q9Y5U5 241 aa4.4□□□□□ -1.71
PTPRM-213ENST00000580949 MGAM2Q2M2H8 2515 aa4.4□□□□□ -1.71
PTPRM-213ENST00000580949 TRGV2A0A075B6R0 118 aa4.39□□□□□ -1.71
PTPRM-213ENST00000580949 H7C1H1 209 aa4.39□□□□□ -1.71
PTPRM-213ENST00000580949 K7EMI3 77 aa4.39□□□□□ -1.71
PTPRM-213ENST00000580949 PRB2P02812 416 aaPredicted RBP4.39□□□□□ -1.71
PTPRM-213ENST00000580949 DEFB130BP0DP73 79 aa4.39□□□□□ -1.71
PTPRM-213ENST00000580949 DEFB130AP0DP74 79 aa4.39□□□□□ -1.71
PTPRM-213ENST00000580949 MAJINQ3KP22 176 aa4.39□□□□□ -1.71
PTPRM-213ENST00000580949 ORMDL2Q53FV1 153 aa4.39□□□□□ -1.71
PTPRM-213ENST00000580949 LINC01545Q5VT33 79 aa4.39□□□□□ -1.71
PTPRM-213ENST00000580949 KRTAP5-3Q6L8H2 238 aa4.39□□□□□ -1.71
PTPRM-213ENST00000580949 ATOH7Q8N100 152 aa4.39□□□□□ -1.71
PTPRM-213ENST00000580949 ZNF664Q8N3J9 261 aa4.39□□□□□ -1.71
PTPRM-213ENST00000580949 SLC25A29Q8N8R3 303 aa4.39□□□□□ -1.71
PTPRM-213ENST00000580949 Q8NAQ8 132 aa4.39□□□□□ -1.71
PTPRM-213ENST00000580949 TOMM6Q96B49 74 aa4.39□□□□□ -1.71
PTPRM-213ENST00000580949 IFI27L1Q96BM0 104 aa4.39□□□□□ -1.71
PTPRM-213ENST00000580949 PMCHL2Q9BQD1 86 aa4.39□□□□□ -1.71
PTPRM-213ENST00000580949 MAP1LC3CQ9BXW4 147 aa4.39□□□□□ -1.71
PTPRM-213ENST00000580949 PRO1933Q9H354 126 aa4.39□□□□□ -1.71
PTPRM-213ENST00000580949 RETNQ9HD89 108 aa4.39□□□□□ -1.71
PTPRM-213ENST00000580949 NBEAL1Q6ZS30 2694 aa4.39□□□□□ -1.71
PTPRM-213ENST00000580949 NACAE9PAV3 2078 aa4.39□□□□□ -1.71
PTPRM-213ENST00000580949 LOC100131303A0A0U1RQF7 123 aa4.38□□□□□ -1.71
PTPRM-213ENST00000580949 IGIPA6NJ69 53 aa4.38□□□□□ -1.71
PTPRM-213ENST00000580949 PCP4L1A6NKN8 68 aa4.38□□□□□ -1.71
PTPRM-213ENST00000580949 H0Y8G0 127 aa4.38□□□□□ -1.71
PTPRM-213ENST00000580949 I3L3M4 83 aa4.38□□□□□ -1.71
PTPRM-213ENST00000580949 RIPPLY3P57055 190 aa4.38□□□□□ -1.71
PTPRM-213ENST00000580949 RPL39P62891 51 aaKnown RBP4.38□□□□□ -1.71
PTPRM-213ENST00000580949 C10orf25Q5T742 122 aa4.38□□□□□ -1.71
PTPRM-213ENST00000580949 FAM222AQ5U5X8 452 aa4.38□□□□□ -1.71
PTPRM-213ENST00000580949 C2orf66Q6UXQ4 117 aa4.38□□□□□ -1.71
PTPRM-213ENST00000580949 LURAP1LQ8IV03 231 aa4.38□□□□□ -1.71
PTPRM-213ENST00000580949 FAM104AQ969W3 186 aa4.38□□□□□ -1.71
PTPRM-213ENST00000580949 DNAJC30Q96LL9 226 aa4.38□□□□□ -1.71
PTPRM-213ENST00000580949 ANK2Q01484 3957 aa4.38□□□□□ -1.71
PTPRM-213ENST00000580949 A0A0A0MQY5 61 aa4.37□□□□□ -1.71
PTPRM-213ENST00000580949 IGHV3-38A0A0C4DH36 116 aa4.37□□□□□ -1.71
PTPRM-213ENST00000580949 K7EIL1 84 aa4.37□□□□□ -1.71
PTPRM-213ENST00000580949 K7EQD1 137 aa4.37□□□□□ -1.71
PTPRM-213ENST00000580949 ATP5LO75964 103 aa4.37□□□□□ -1.71
PTPRM-213ENST00000580949 MIFP14174 115 aa4.37□□□□□ -1.71
PTPRM-213ENST00000580949 UBE2D3P61077 147 aa4.37□□□□□ -1.71
PTPRM-213ENST00000580949 UBE2D2P62837 147 aa4.37□□□□□ -1.71
PTPRM-213ENST00000580949 KPRPQ5T749 579 aaPredicted RBP4.37□□□□□ -1.71
PTPRM-213ENST00000580949 ZC2HC1BQ5TFG8 222 aa4.37□□□□□ -1.71
PTPRM-213ENST00000580949 C20orf203Q8NBC4 194 aa4.37□□□□□ -1.71
PTPRM-213ENST00000580949 ZNRF2Q8NHG8 242 aa4.37□□□□□ -1.71
PTPRM-213ENST00000580949 PHLDA1Q8WV24 401 aaPredicted RBP4.37□□□□□ -1.71
PTPRM-213ENST00000580949 SCGB3A1Q96QR1 104 aa4.37□□□□□ -1.71
PTPRM-213ENST00000580949 KIR2DL4Q99706 377 aa4.37□□□□□ -1.71
PTPRM-213ENST00000580949 ZMAT5Q9UDW3 170 aaKnown RBP4.37□□□□□ -1.71
PTPRM-213ENST00000580949 CELA1Q9UNI1 258 aa4.37□□□□□ -1.71
PTPRM-213ENST00000580949 TP53TG1Q9Y2A0 90 aa4.37□□□□□ -1.71
PTPRM-213ENST00000580949 DNAH3Q8TD57 4116 aa4.37□□□□□ -1.71
PTPRM-213ENST00000580949 TRBV7-3A0A075B6L6 115 aa4.36□□□□□ -1.71
PTPRM-213ENST00000580949 TRAV9-2A0A087WT02 112 aa4.36□□□□□ -1.71
PTPRM-213ENST00000580949 TRGV4A0A0C4DH28 118 aa4.36□□□□□ -1.71
PTPRM-213ENST00000580949 TRBV10-1A0A0K0K1A3 114 aa4.36□□□□□ -1.71
PTPRM-213ENST00000580949 TRBV6-4A0A1B0GX49 114 aa4.36□□□□□ -1.71
PTPRM-213ENST00000580949 GAGE12JA6NER3 117 aa4.36□□□□□ -1.71
PTPRM-213ENST00000580949 LYRM9A8MSI8 78 aa4.36□□□□□ -1.71
PTPRM-213ENST00000580949 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.36□□□□□ -1.71
PTPRM-213ENST00000580949 CIDEAO60543 219 aa4.36□□□□□ -1.71
PTPRM-213ENST00000580949 PRSS1P07477 247 aa4.36□□□□□ -1.71
PTPRM-213ENST00000580949 PKIAP61925 76 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms