RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 C5orf47Q569G3 176 aa10.25□□□□□ -0.77
RNF43-202ENST00000577625 PEMTQ9UBM1 199 aa10.25□□□□□ -0.77
RNF43-202ENST00000577625 TRAV21A0A0B4J279 112 aa10.24□□□□□ -0.77
RNF43-202ENST00000577625 INAFM1C9JVW0 142 aa10.24□□□□□ -0.77
RNF43-202ENST00000577625 NDUFA7O95182 113 aa10.24□□□□□ -0.77
RNF43-202ENST00000577625 SCGB1D4Q6XE38 83 aa10.24□□□□□ -0.77
RNF43-202ENST00000577625 CITED2Q99967 270 aaPredicted RBP10.24□□□□□ -0.77
RNF43-202ENST00000577625 A0A1W2PRX2 142 aa10.24□□□□□ -0.77
RNF43-202ENST00000577625 ZNF815PA8K554 130 aa10.24□□□□□ -0.77
RNF43-202ENST00000577625 Q6ZQT7 251 aa10.24□□□□□ -0.77
RNF43-202ENST00000577625 MSRB1Q9NZV6 116 aa10.23□□□□□ -0.77
RNF43-202ENST00000577625 MRPL23Q16540 153 aaKnown RBP10.22□□□□□ -0.77
RNF43-202ENST00000577625 C10orf126Q8N4M7 172 aa10.22□□□□□ -0.77
RNF43-202ENST00000577625 C15orf53Q8NAA6 179 aa10.22□□□□□ -0.77
RNF43-202ENST00000577625 ODF3Q96PU9 254 aa10.22□□□□□ -0.77
RNF43-202ENST00000577625 CSDC2Q9Y534 153 aaKnown RBP10.22□□□□□ -0.77
RNF43-202ENST00000577625 TRAV8-4A0A0B4J246 113 aa10.22□□□□□ -0.77
RNF43-202ENST00000577625 KLLNB2CW77 178 aa10.22□□□□□ -0.77
RNF43-202ENST00000577625 C9JAW5 83 aa10.22□□□□□ -0.77
RNF43-202ENST00000577625 GATA1P15976 413 aaPredicted RBP10.22□□□□□ -0.77
RNF43-202ENST00000577625 PRADC1Q9BSG0 188 aa10.22□□□□□ -0.77
RNF43-202ENST00000577625 F8P00451 2351 aa10.22□□□□□ -0.77
RNF43-202ENST00000577625 Q8N1Y9 231 aa10.21□□□□□ -0.77
RNF43-202ENST00000577625 DNAJC30Q96LL9 226 aa10.21□□□□□ -0.77
RNF43-202ENST00000577625 A0A0J9YX75 114 aa10.21□□□□□ -0.78
RNF43-202ENST00000577625 CCL24O00175 119 aa10.21□□□□□ -0.78
RNF43-202ENST00000577625 PROK1P58294 105 aa10.21□□□□□ -0.78
RNF43-202ENST00000577625 PLEKHB2Q96CS7 222 aa10.21□□□□□ -0.78
RNF43-202ENST00000577625 LINC01600Q96MT4 127 aa10.21□□□□□ -0.78
RNF43-202ENST00000577625 LINC01587Q99440 93 aa10.21□□□□□ -0.78
RNF43-202ENST00000577625 TRAV2A0A0B4J234 112 aa10.2□□□□□ -0.78
RNF43-202ENST00000577625 CFC1BP0CG36 223 aa10.2□□□□□ -0.78
RNF43-202ENST00000577625 CFC1P0CG37 223 aa10.2□□□□□ -0.78
RNF43-202ENST00000577625 RNASE4P34096 147 aaKnown RBP10.2□□□□□ -0.78
RNF43-202ENST00000577625 RPL13AP40429 203 aaKnown RBP10.2□□□□□ -0.78
RNF43-202ENST00000577625 TMEM61Q8N0U2 210 aa10.19□□□□□ -0.78
RNF43-202ENST00000577625 PRO1854Q9UHT4 67 aa10.19□□□□□ -0.78
RNF43-202ENST00000577625 IGHV4-4A0A075B6R2 117 aa10.19□□□□□ -0.78
RNF43-202ENST00000577625 NTN5Q8WTR8 489 aaPredicted RBP10.19□□□□□ -0.78
RNF43-202ENST00000577625 NEXN-AS1Q8NBZ9 246 aa10.18□□□□□ -0.78
RNF43-202ENST00000577625 DYNLRB2Q8TF09 96 aa10.18□□□□□ -0.78
RNF43-202ENST00000577625 ADARB2-AS1A8MUL3 147 aa10.18□□□□□ -0.78
RNF43-202ENST00000577625 DUSP14O95147 198 aaKnown RBP10.18□□□□□ -0.78
RNF43-202ENST00000577625 DEFB114Q30KQ6 69 aa10.18□□□□□ -0.78
RNF43-202ENST00000577625 NRACQ8N912 160 aa10.18□□□□□ -0.78
RNF43-202ENST00000577625 MED14OSP0DP75 135 aa10.17□□□□□ -0.78
RNF43-202ENST00000577625 NIPBLQ6KC79 2804 aaeCLIP10.17□□□□□ -0.78
RNF43-202ENST00000577625 A0A0J9YY99 117 aa10.16□□□□□ -0.78
RNF43-202ENST00000577625 SCGB3A1Q96QR1 104 aa10.16□□□□□ -0.78
RNF43-202ENST00000577625 IGHV3-30P01768 117 aa10.16□□□□□ -0.78
RNF43-202ENST00000577625 P0DMU3 169 aa10.16□□□□□ -0.78
RNF43-202ENST00000577625 FAM231AP0DMU4 169 aa10.16□□□□□ -0.78
RNF43-202ENST00000577625 FAM231CP0DMU5 169 aa10.16□□□□□ -0.78
RNF43-202ENST00000577625 IGHV3-30-5P0DP03 117 aa10.16□□□□□ -0.78
RNF43-202ENST00000577625 SPANXN1Q5VSR9 72 aa10.16□□□□□ -0.78
RNF43-202ENST00000577625 S100A4P26447 101 aaKnown RBP10.15□□□□□ -0.78
RNF43-202ENST00000577625 TRPT1Q86TN4 253 aaKnown RBP10.15□□□□□ -0.78
RNF43-202ENST00000577625 TOMM6Q96B49 74 aa10.15□□□□□ -0.78
RNF43-202ENST00000577625 CHCHD5Q9BSY4 110 aa10.15□□□□□ -0.78
RNF43-202ENST00000577625 JMJD1CQ15652 2540 aa10.15□□□□□ -0.78
RNF43-202ENST00000577625 KRTAP10-3P60369 221 aa10.15□□□□□ -0.79
RNF43-202ENST00000577625 ATXN8Q156A1 80 aa10.15□□□□□ -0.79
RNF43-202ENST00000577625 ORMDL2Q53FV1 153 aa10.15□□□□□ -0.79
RNF43-202ENST00000577625 M0R2P5 195 aa10.14□□□□□ -0.79
RNF43-202ENST00000577625 WIPF1O43516 503 aa10.14□□□□□ -0.79
RNF43-202ENST00000577625 IGKV3-20P01619 116 aa10.14□□□□□ -0.79
RNF43-202ENST00000577625 LINC00694P0DN24 101 aa10.14□□□□□ -0.79
RNF43-202ENST00000577625 DEFB131AP59861 70 aa10.14□□□□□ -0.79
RNF43-202ENST00000577625 BAHCC1Q9P281 2608 aa10.14□□□□□ -0.79
RNF43-202ENST00000577625 MUC4Q99102 2169 aa10.14□□□□□ -0.79
RNF43-202ENST00000577625 TRAV12-3A0A0B4J271 114 aa10.14□□□□□ -0.79
RNF43-202ENST00000577625 TRAV25A0A0B4J276 109 aa10.14□□□□□ -0.79
RNF43-202ENST00000577625 TRBV7-7A0A0K0K1E9 115 aa10.14□□□□□ -0.79
RNF43-202ENST00000577625 TEX49A0A1B0GTD5 131 aa10.14□□□□□ -0.79
RNF43-202ENST00000577625 A8MTW9 85 aa10.14□□□□□ -0.79
RNF43-202ENST00000577625 H3BMM0 161 aa10.14□□□□□ -0.79
RNF43-202ENST00000577625 GNRH2O43555 120 aa10.14□□□□□ -0.79
RNF43-202ENST00000577625 UBE2WQ96B02 151 aa10.14□□□□□ -0.79
RNF43-202ENST00000577625 SMIM9A6NGZ8 99 aa10.13□□□□□ -0.79
RNF43-202ENST00000577625 RNASE3P12724 160 aaKnown RBP10.13□□□□□ -0.79
RNF43-202ENST00000577625 NSUN5P1Q3KNT7 163 aa10.13□□□□□ -0.79
RNF43-202ENST00000577625 LINC01620Q4KN68 170 aa10.13□□□□□ -0.79
RNF43-202ENST00000577625 SLC25A29Q8N8R3 303 aa10.13□□□□□ -0.79
RNF43-202ENST00000577625 SMIM2Q9BVW6 85 aa10.13□□□□□ -0.79
RNF43-202ENST00000577625 SPANXDQ9BXN6 97 aa10.13□□□□□ -0.79
RNF43-202ENST00000577625 ZNF256Q9Y2P7 627 aaPredicted RBP10.13□□□□□ -0.79
RNF43-202ENST00000577625 PHLDA3Q9Y5J5 127 aa10.13□□□□□ -0.79
RNF43-202ENST00000577625 TRBV10-2A0A0K0K1G8 114 aa10.12□□□□□ -0.79
RNF43-202ENST00000577625 FAM240AA0A1B0GVK7 77 aa10.12□□□□□ -0.79
RNF43-202ENST00000577625 KNCNA6PVL3 124 aa10.12□□□□□ -0.79
RNF43-202ENST00000577625 HERVK_113P61574 105 aa10.12□□□□□ -0.79
RNF43-202ENST00000577625 SPINK13Q1W4C9 94 aa10.12□□□□□ -0.79
RNF43-202ENST00000577625 BAALCQ8WXS3 180 aa10.12□□□□□ -0.79
RNF43-202ENST00000577625 MAP6D1Q9H9H5 199 aa10.12□□□□□ -0.79
RNF43-202ENST00000577625 TENM1Q9UKZ4 2725 aa10.12□□□□□ -0.79
RNF43-202ENST00000577625 TRAV12-2A0A075B6T6 113 aa10.12□□□□□ -0.79
RNF43-202ENST00000577625 IGHV3-33P01772 117 aa10.12□□□□□ -0.79
RNF43-202ENST00000577625 C3orf56Q8N813 242 aa10.12□□□□□ -0.79
RNF43-202ENST00000577625 M0R381 172 aa10.11□□□□□ -0.79
RNF43-202ENST00000577625 TRAV26-2A0A0B4J265 109 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms