RNA–Protein interactions for RNA: ENST00000575313.1

CLDN7-208, Transcript of claudin 7, humanhuman

TSL 3

Gene CLDN7, Length 605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-208ENST00000575313 IQCJQ1A5X6 159 aa12.25□□□□□ -0.45
CLDN7-208ENST00000575313 Q6ZR54 194 aa12.25□□□□□ -0.45
CLDN7-208ENST00000575313 C18orf32Q8TCD1 76 aa12.25□□□□□ -0.45
CLDN7-208ENST00000575313 NBDYA0A0U1RRE5 68 aa12.24□□□□□ -0.45
CLDN7-208ENST00000575313 M0R2N4 97 aa12.24□□□□□ -0.45
CLDN7-208ENST00000575313 COTL1Q14019 142 aa12.24□□□□□ -0.45
CLDN7-208ENST00000575313 TTC32Q5I0X7 151 aa12.24□□□□□ -0.45
CLDN7-208ENST00000575313 Q8N8P6 123 aa12.24□□□□□ -0.45
CLDN7-208ENST00000575313 PRSS3P2Q8NHM4 247 aa12.24□□□□□ -0.45
CLDN7-208ENST00000575313 C1orf196B1AJZ1 125 aa12.23□□□□□ -0.45
CLDN7-208ENST00000575313 SIVA1O15304 175 aa12.23□□□□□ -0.45
CLDN7-208ENST00000575313 IFI27P40305 119 aaPredicted RBP12.23□□□□□ -0.45
CLDN7-208ENST00000575313 TMEM97Q5BJF2 176 aa12.23□□□□□ -0.45
CLDN7-208ENST00000575313 NTM-AS1Q6ZSK4 140 aa12.23□□□□□ -0.45
CLDN7-208ENST00000575313 KIR2DL4Q99706 377 aa12.23□□□□□ -0.45
CLDN7-208ENST00000575313 NXT2Q9NPJ8 142 aaKnown RBP12.23□□□□□ -0.45
CLDN7-208ENST00000575313 TSHBP01222 138 aa12.22□□□□□ -0.45
CLDN7-208ENST00000575313 TRBV6-8A0A0A6YYG3 113 aa12.21□□□□□ -0.45
CLDN7-208ENST00000575313 HIST1H2BKO60814 126 aa12.21□□□□□ -0.45
CLDN7-208ENST00000575313 HIST1H2BJP06899 126 aa12.21□□□□□ -0.45
CLDN7-208ENST00000575313 HIST1H2BOP23527 126 aa12.21□□□□□ -0.45
CLDN7-208ENST00000575313 FCER1GP30273 86 aa12.21□□□□□ -0.45
CLDN7-208ENST00000575313 HIST1H2BBP33778 126 aa12.21□□□□□ -0.45
CLDN7-208ENST00000575313 HIST1H2BDP58876 126 aa12.21□□□□□ -0.45
CLDN7-208ENST00000575313 HIST1H2BCP62807 126 aa12.21□□□□□ -0.45
CLDN7-208ENST00000575313 Q0VG73 95 aa12.21□□□□□ -0.45
CLDN7-208ENST00000575313 HIST2H2BEQ16778 126 aa12.21□□□□□ -0.45
CLDN7-208ENST00000575313 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.21□□□□□ -0.45
CLDN7-208ENST00000575313 LELP1Q5T871 98 aa12.21□□□□□ -0.45
CLDN7-208ENST00000575313 HIST1H2BHQ93079 126 aa12.21□□□□□ -0.45
CLDN7-208ENST00000575313 HIST1H2BNQ99877 126 aa12.21□□□□□ -0.45
CLDN7-208ENST00000575313 HIST1H2BMQ99879 126 aa12.21□□□□□ -0.45
CLDN7-208ENST00000575313 TRAV8-6A0A0B4J262 113 aa12.2□□□□□ -0.46
CLDN7-208ENST00000575313 TCAPO15273 167 aa12.2□□□□□ -0.46
CLDN7-208ENST00000575313 NIT1Q86X76 327 aa12.2□□□□□ -0.46
CLDN7-208ENST00000575313 IGHV1-24A0A0C4DH33 117 aa12.19□□□□□ -0.46
CLDN7-208ENST00000575313 AMTP48728 403 aa12.19□□□□□ -0.46
CLDN7-208ENST00000575313 FA2HQ7L5A8 372 aa12.19□□□□□ -0.46
CLDN7-208ENST00000575313 BAGE3Q86Y29 109 aa12.19□□□□□ -0.46
CLDN7-208ENST00000575313 WFDC10BQ8IUB3 73 aa12.19□□□□□ -0.46
CLDN7-208ENST00000575313 TRBV25-1A0A075B6N4 114 aa12.18□□□□□ -0.46
CLDN7-208ENST00000575313 K7EP13 123 aa12.18□□□□□ -0.46
CLDN7-208ENST00000575313 RAB5BP61020 215 aa12.18□□□□□ -0.46
CLDN7-208ENST00000575313 URB1-AS1Q96HZ7 61 aa12.18□□□□□ -0.46
CLDN7-208ENST00000575313 TRAV9-2A0A087WT02 112 aa12.17□□□□□ -0.46
CLDN7-208ENST00000575313 LINC01546A6NGU7 62 aa12.17□□□□□ -0.46
CLDN7-208ENST00000575313 K7EMI3 77 aa12.17□□□□□ -0.46
CLDN7-208ENST00000575313 LINC00614P0C842 121 aa12.17□□□□□ -0.46
CLDN7-208ENST00000575313 DNAH10OSP0CZ25 163 aa12.17□□□□□ -0.46
CLDN7-208ENST00000575313 LAGE3Q14657 143 aa12.17□□□□□ -0.46
CLDN7-208ENST00000575313 C1orf134Q5TEV5 83 aa12.17□□□□□ -0.46
CLDN7-208ENST00000575313 CHCHD7Q9BUK0 85 aa12.17□□□□□ -0.46
CLDN7-208ENST00000575313 BTF3P20290 206 aaKnown RBP12.16□□□□□ -0.46
CLDN7-208ENST00000575313 TMEM243Q9BU79 118 aa12.16□□□□□ -0.46
CLDN7-208ENST00000575313 ESDP10768 282 aa12.15□□□□□ -0.46
CLDN7-208ENST00000575313 ORMDL2Q53FV1 153 aa12.15□□□□□ -0.46
CLDN7-208ENST00000575313 RNASEKQ6P5S7 137 aaKnown RBP12.15□□□□□ -0.46
CLDN7-208ENST00000575313 LINC00336Q6ZUF6 198 aa12.15□□□□□ -0.46
CLDN7-208ENST00000575313 CHCHD5Q9BSY4 110 aa12.15□□□□□ -0.46
CLDN7-208ENST00000575313 KRTAP1-5Q9BYS1 174 aa12.15□□□□□ -0.46
CLDN7-208ENST00000575313 AP5S1Q9NUS5 200 aa12.15□□□□□ -0.46
CLDN7-208ENST00000575313 LINC01556Q5JQF7 62 aa12.14□□□□□ -0.47
CLDN7-208ENST00000575313 C6orf223Q8N319 242 aa12.14□□□□□ -0.47
CLDN7-208ENST00000575313 CHCHD1Q96BP2 118 aaKnown RBP12.14□□□□□ -0.47
CLDN7-208ENST00000575313 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.13□□□□□ -0.47
CLDN7-208ENST00000575313 IGKV2-29A2NJV5 120 aaPredicted RBP12.13□□□□□ -0.47
CLDN7-208ENST00000575313 SERF1AO75920 110 aa12.13□□□□□ -0.47
CLDN7-208ENST00000575313 NDUFA6P56556 154 aa12.13□□□□□ -0.47
CLDN7-208ENST00000575313 C10orf126Q8N4M7 172 aa12.13□□□□□ -0.47
CLDN7-208ENST00000575313 C20orf203Q8NBC4 194 aa12.13□□□□□ -0.47
CLDN7-208ENST00000575313 UBE2L6O14933 153 aa12.12□□□□□ -0.47
CLDN7-208ENST00000575313 RTL8CO15255 209 aa12.12□□□□□ -0.47
CLDN7-208ENST00000575313 LINC00310P59036 64 aa12.12□□□□□ -0.47
CLDN7-208ENST00000575313 GAGE6Q13070 117 aa12.12□□□□□ -0.47
CLDN7-208ENST00000575313 TMEM262E9PQX1 116 aa12.11□□□□□ -0.47
CLDN7-208ENST00000575313 TMEM18Q96B42 140 aa12.11□□□□□ -0.47
CLDN7-208ENST00000575313 H7C423 109 aa12.1□□□□□ -0.47
CLDN7-208ENST00000575313 NUPR1O60356 82 aa12.1□□□□□ -0.47
CLDN7-208ENST00000575313 G0S2P27469 103 aa12.1□□□□□ -0.47
CLDN7-208ENST00000575313 RPL39P62891 51 aaKnown RBP12.1□□□□□ -0.47
CLDN7-208ENST00000575313 HSBP1O75506 76 aa12.09□□□□□ -0.47
CLDN7-208ENST00000575313 PMCHL1Q16048 86 aa12.09□□□□□ -0.47
CLDN7-208ENST00000575313 C2orf66Q6UXQ4 117 aa12.09□□□□□ -0.47
CLDN7-208ENST00000575313 CYSLTR1Q9Y271 337 aa12.09□□□□□ -0.47
CLDN7-208ENST00000575313 FGF6P10767 208 aa12.08□□□□□ -0.48
CLDN7-208ENST00000575313 PKIAP61925 76 aa12.08□□□□□ -0.48
CLDN7-208ENST00000575313 COA6Q5JTJ3 125 aaKnown RBP12.08□□□□□ -0.48
CLDN7-208ENST00000575313 AMMECR1LQ6DCA0 310 aa12.08□□□□□ -0.48
CLDN7-208ENST00000575313 NFE4Q86UQ8 179 aa12.08□□□□□ -0.48
CLDN7-208ENST00000575313 A0A087WX48 190 aa12.07□□□□□ -0.48
CLDN7-208ENST00000575313 A0A096LNJ9 63 aa12.07□□□□□ -0.48
CLDN7-208ENST00000575313 PRSS29PA6NIE9 313 aa12.07□□□□□ -0.48
CLDN7-208ENST00000575313 IGHV3-30P01768 117 aa12.07□□□□□ -0.48
CLDN7-208ENST00000575313 IGHV3-33P01772 117 aa12.07□□□□□ -0.48
CLDN7-208ENST00000575313 IGHV3-30-3P0DP02 117 aa12.07□□□□□ -0.48
CLDN7-208ENST00000575313 IGHV3-30-5P0DP03 117 aa12.07□□□□□ -0.48
CLDN7-208ENST00000575313 FAM19A2Q8N3H0 131 aa12.07□□□□□ -0.48
CLDN7-208ENST00000575313 TOMM6Q96B49 74 aa12.07□□□□□ -0.48
CLDN7-208ENST00000575313 DNAH10Q8IVF4 4471 aa12.07□□□□□ -0.48
CLDN7-208ENST00000575313 HBDP02042 147 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms