RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 C15orf54Q8N8G6 183 aa5.68□□□□□ -1.5
SMG6-216ENST00000575176 FAM30AQ9NZY2 134 aa5.68□□□□□ -1.5
SMG6-216ENST00000575176 FAT3Q8TDW7 4589 aa5.67□□□□□ -1.5
SMG6-216ENST00000575176 TRBV25-1A0A075B6N4 114 aa5.67□□□□□ -1.5
SMG6-216ENST00000575176 IGHV1-24A0A0C4DH33 117 aa5.67□□□□□ -1.5
SMG6-216ENST00000575176 A0A1B0GUV1 79 aa5.67□□□□□ -1.5
SMG6-216ENST00000575176 SDHAF1A6NFY7 115 aa5.67□□□□□ -1.5
SMG6-216ENST00000575176 NCR2O95944 276 aa5.67□□□□□ -1.5
SMG6-216ENST00000575176 ESDP10768 282 aa5.67□□□□□ -1.5
SMG6-216ENST00000575176 POLR2KP53803 58 aaKnown RBP5.67□□□□□ -1.5
SMG6-216ENST00000575176 TMEM97Q5BJF2 176 aa5.67□□□□□ -1.5
SMG6-216ENST00000575176 UBE2WQ96B02 151 aa5.67□□□□□ -1.5
SMG6-216ENST00000575176 CHCHD5Q9BSY4 110 aa5.67□□□□□ -1.5
SMG6-216ENST00000575176 TMEM70Q9BUB7 260 aa5.67□□□□□ -1.5
SMG6-216ENST00000575176 PGPEP1Q9NXJ5 209 aa5.67□□□□□ -1.5
SMG6-216ENST00000575176 LRP1Q07954 4544 aaKnown RBP5.67□□□□□ -1.5
SMG6-216ENST00000575176 A0A087WX48 190 aa5.66□□□□□ -1.5
SMG6-216ENST00000575176 TRBV27A0A0K0K1C4 114 aa5.66□□□□□ -1.5
SMG6-216ENST00000575176 SMKR1H3BMG3 65 aa5.66□□□□□ -1.5
SMG6-216ENST00000575176 CLPSL2Q6UWE3 100 aa5.66□□□□□ -1.5
SMG6-216ENST00000575176 Q8N1X5 172 aa5.66□□□□□ -1.5
SMG6-216ENST00000575176 LINC00269Q8N2A0 174 aa5.66□□□□□ -1.5
SMG6-216ENST00000575176 BAALCQ8WXS3 180 aa5.66□□□□□ -1.5
SMG6-216ENST00000575176 FAM104AQ969W3 186 aa5.66□□□□□ -1.5
SMG6-216ENST00000575176 TMEM243Q9BU79 118 aa5.66□□□□□ -1.5
SMG6-216ENST00000575176 NAT8BQ9UHF3 227 aa5.66□□□□□ -1.5
SMG6-216ENST00000575176 IGKV2D-24A0A075B6R9 120 aa5.65□□□□□ -1.5
SMG6-216ENST00000575176 ANGP03950 147 aaKnown RBP5.65□□□□□ -1.5
SMG6-216ENST00000575176 HAMPP81172 84 aa5.65□□□□□ -1.5
SMG6-216ENST00000575176 MIAQ16674 131 aa5.65□□□□□ -1.5
SMG6-216ENST00000575176 MRPL51Q4U2R6 128 aaKnown RBP5.65□□□□□ -1.5
SMG6-216ENST00000575176 FAM104BQ5XKR9 115 aa5.65□□□□□ -1.5
SMG6-216ENST00000575176 MRAP2Q96G30 205 aa5.65□□□□□ -1.5
SMG6-216ENST00000575176 TM2D2Q9BX73 214 aa5.65□□□□□ -1.5
SMG6-216ENST00000575176 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.64□□□□□ -1.51
SMG6-216ENST00000575176 IGLV5-52A0A0A0MRZ9 124 aa5.64□□□□□ -1.51
SMG6-216ENST00000575176 IGKV2-29A2NJV5 120 aaPredicted RBP5.64□□□□□ -1.51
SMG6-216ENST00000575176 PSCAO43653 123 aa5.64□□□□□ -1.51
SMG6-216ENST00000575176 GCSHP23434 173 aa5.64□□□□□ -1.51
SMG6-216ENST00000575176 AMTP48728 403 aa5.64□□□□□ -1.51
SMG6-216ENST00000575176 Q0VG73 95 aa5.64□□□□□ -1.51
SMG6-216ENST00000575176 COTL1Q14019 142 aa5.64□□□□□ -1.51
SMG6-216ENST00000575176 LINC01620Q4KN68 170 aa5.64□□□□□ -1.51
SMG6-216ENST00000575176 TMEM242Q9NWH2 141 aa5.64□□□□□ -1.51
SMG6-216ENST00000575176 URGCP-MRPS24S4R325 110 aa5.64□□□□□ -1.51
SMG6-216ENST00000575176 TRBV24-1A0A075B6N3 115 aa5.63□□□□□ -1.51
SMG6-216ENST00000575176 KRTAP10-4P60372 401 aaPredicted RBP5.63□□□□□ -1.51
SMG6-216ENST00000575176 PKIAP61925 76 aa5.63□□□□□ -1.51
SMG6-216ENST00000575176 REG3AQ06141 175 aa5.63□□□□□ -1.51
SMG6-216ENST00000575176 ELOBQ15370 118 aa5.63□□□□□ -1.51
SMG6-216ENST00000575176 C15orf56Q8N910 161 aa5.63□□□□□ -1.51
SMG6-216ENST00000575176 COX11Q9Y6N1 276 aa5.63□□□□□ -1.51
SMG6-216ENST00000575176 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.62□□□□□ -1.51
SMG6-216ENST00000575176 USP17L23D6RBM5 183 aa5.62□□□□□ -1.51
SMG6-216ENST00000575176 TMEM262E9PQX1 116 aa5.62□□□□□ -1.51
SMG6-216ENST00000575176 I3L3M4 83 aa5.62□□□□□ -1.51
SMG6-216ENST00000575176 EREGO14944 169 aa5.62□□□□□ -1.51
SMG6-216ENST00000575176 SLPIP03973 132 aa5.62□□□□□ -1.51
SMG6-216ENST00000575176 PRSS1P07477 247 aa5.62□□□□□ -1.51
SMG6-216ENST00000575176 RPL32P62910 135 aaKnown RBP5.62□□□□□ -1.51
SMG6-216ENST00000575176 HBBP68871 147 aa5.62□□□□□ -1.51
SMG6-216ENST00000575176 PNRC1Q12796 327 aaPredicted RBP5.62□□□□□ -1.51
SMG6-216ENST00000575176 RIGQ13278 110 aa5.62□□□□□ -1.51
SMG6-216ENST00000575176 MRPL54Q6P161 138 aaKnown RBP5.62□□□□□ -1.51
SMG6-216ENST00000575176 KCNIP4Q6PIL6 250 aa5.62□□□□□ -1.51
SMG6-216ENST00000575176 MRPL52Q86TS9 123 aaKnown RBP5.62□□□□□ -1.51
SMG6-216ENST00000575176 RMI2Q96E14 147 aa5.62□□□□□ -1.51
SMG6-216ENST00000575176 C1orf43Q9BWL3 253 aa5.62□□□□□ -1.51
SMG6-216ENST00000575176 IGLV10-54A0A075B6I4 117 aa5.61□□□□□ -1.51
SMG6-216ENST00000575176 A0A1B0GW15 77 aa5.61□□□□□ -1.51
SMG6-216ENST00000575176 H7C423 109 aa5.61□□□□□ -1.51
SMG6-216ENST00000575176 PANO1I0J062 215 aa5.61□□□□□ -1.51
SMG6-216ENST00000575176 NPYP01303 97 aa5.61□□□□□ -1.51
SMG6-216ENST00000575176 HLA-DQA1P01909 254 aa5.61□□□□□ -1.51
SMG6-216ENST00000575176 CRPP02741 224 aa5.61□□□□□ -1.51
SMG6-216ENST00000575176 APCSP02743 223 aa5.61□□□□□ -1.51
SMG6-216ENST00000575176 FGF6P10767 208 aa5.61□□□□□ -1.51
SMG6-216ENST00000575176 CAMPP49913 170 aa5.61□□□□□ -1.51
SMG6-216ENST00000575176 SUMO2P61956 95 aaKnown RBP5.61□□□□□ -1.51
SMG6-216ENST00000575176 C10orf91Q5T1B1 145 aa5.61□□□□□ -1.51
SMG6-216ENST00000575176 SMIM15Q7Z3B0 74 aa5.61□□□□□ -1.51
SMG6-216ENST00000575176 ATP5L2Q7Z4Y8 100 aa5.61□□□□□ -1.51
SMG6-216ENST00000575176 ST20Q9HBF5 79 aa5.61□□□□□ -1.51
SMG6-216ENST00000575176 TMEM218A2RU14 115 aa5.6□□□□□ -1.51
SMG6-216ENST00000575176 D6R8Y8 96 aa5.6□□□□□ -1.51
SMG6-216ENST00000575176 FOXI1Q12951 378 aa5.6□□□□□ -1.51
SMG6-216ENST00000575176 UQCC3Q6UW78 93 aa5.6□□□□□ -1.51
SMG6-216ENST00000575176 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.6□□□□□ -1.51
SMG6-216ENST00000575176 BORCS7Q96B45 105 aa5.6□□□□□ -1.51
SMG6-216ENST00000575176 UBE2D4Q9Y2X8 147 aa5.6□□□□□ -1.51
SMG6-216ENST00000575176 FLG2Q5D862 2391 aaPredicted RBP5.6□□□□□ -1.51
SMG6-216ENST00000575176 TRAV8-4A0A0B4J246 113 aa5.59□□□□□ -1.51
SMG6-216ENST00000575176 LINC00862A6NCI5 91 aa5.59□□□□□ -1.51
SMG6-216ENST00000575176 TNFRSF6BO95407 300 aa5.59□□□□□ -1.51
SMG6-216ENST00000575176 ZNF25P17030 456 aaPredicted RBP5.59□□□□□ -1.51
SMG6-216ENST00000575176 CNBPP62633 177 aaKnown RBP5.59□□□□□ -1.51
SMG6-216ENST00000575176 SCXQ7RTU7 201 aa5.59□□□□□ -1.51
SMG6-216ENST00000575176 SMIM2Q9BVW6 85 aa5.59□□□□□ -1.51
SMG6-216ENST00000575176 CDC42SE2Q9NRR3 84 aa5.59□□□□□ -1.51
SMG6-216ENST00000575176 C7orf77A4D0Y5 90 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms