RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 RPL23P62829 140 aaKnown RBP7.99□□□□□ -1.13
CCDC40-210ENST00000573903 GTSF1Q8WW33 167 aa7.99□□□□□ -1.13
CCDC40-210ENST00000573903 HIGD1CA8MV81 97 aa7.98□□□□□ -1.13
CCDC40-210ENST00000573903 PKIAP61925 76 aa7.98□□□□□ -1.13
CCDC40-210ENST00000573903 TMEM97Q5BJF2 176 aa7.98□□□□□ -1.13
CCDC40-210ENST00000573903 CLLU1Q5K131 121 aa7.98□□□□□ -1.13
CCDC40-210ENST00000573903 SUMO4Q6EEV6 95 aa7.98□□□□□ -1.13
CCDC40-210ENST00000573903 PGLYRP4Q96LB8 373 aa7.98□□□□□ -1.13
CCDC40-210ENST00000573903 DNAJC30Q96LL9 226 aa7.98□□□□□ -1.13
CCDC40-210ENST00000573903 FOXA3P55318 350 aaPredicted RBP7.97□□□□□ -1.13
CCDC40-210ENST00000573903 RASL11AQ6T310 242 aa7.97□□□□□ -1.13
CCDC40-210ENST00000573903 ATRAIDQ6UW56 229 aa7.97□□□□□ -1.13
CCDC40-210ENST00000573903 CIRBP-AS1Q8TBR5 109 aa7.97□□□□□ -1.13
CCDC40-210ENST00000573903 V9GYV3 84 aa7.97□□□□□ -1.13
CCDC40-210ENST00000573903 TRBV6-8A0A0A6YYG3 113 aa7.96□□□□□ -1.14
CCDC40-210ENST00000573903 A0A1B0GUT8 65 aa7.96□□□□□ -1.14
CCDC40-210ENST00000573903 M0QY20 66 aa7.96□□□□□ -1.14
CCDC40-210ENST00000573903 ANGP03950 147 aaKnown RBP7.96□□□□□ -1.14
CCDC40-210ENST00000573903 SERTAD4-AS1Q5TG53 156 aa7.96□□□□□ -1.14
CCDC40-210ENST00000573903 HLA-DQA1P01909 254 aa7.95□□□□□ -1.14
CCDC40-210ENST00000573903 CHCHD5Q9BSY4 110 aa7.95□□□□□ -1.14
CCDC40-210ENST00000573903 NAT8BQ9UHF3 227 aa7.95□□□□□ -1.14
CCDC40-210ENST00000573903 OXTP01178 125 aa7.94□□□□□ -1.14
CCDC40-210ENST00000573903 PNRC1Q12796 327 aaPredicted RBP7.94□□□□□ -1.14
CCDC40-210ENST00000573903 RIGQ13278 110 aa7.94□□□□□ -1.14
CCDC40-210ENST00000573903 MIAQ16674 131 aa7.94□□□□□ -1.14
CCDC40-210ENST00000573903 MPV17L2Q567V2 206 aa7.94□□□□□ -1.14
CCDC40-210ENST00000573903 NIT2Q9NQR4 276 aa7.94□□□□□ -1.14
CCDC40-210ENST00000573903 TRBV25-1A0A075B6N4 114 aa7.93□□□□□ -1.14
CCDC40-210ENST00000573903 USP17L23D6RBM5 183 aa7.93□□□□□ -1.14
CCDC40-210ENST00000573903 RPL37AP61513 92 aaKnown RBP7.93□□□□□ -1.14
CCDC40-210ENST00000573903 IFITM2Q01629 132 aa7.93□□□□□ -1.14
CCDC40-210ENST00000573903 ENHOQ6UWT2 76 aa7.93□□□□□ -1.14
CCDC40-210ENST00000573903 DNAH8Q96JB1 4490 aa7.93□□□□□ -1.14
CCDC40-210ENST00000573903 IGHV1-24A0A0C4DH33 117 aa7.92□□□□□ -1.14
CCDC40-210ENST00000573903 PPP1R2P9O14990 202 aa7.92□□□□□ -1.14
CCDC40-210ENST00000573903 UQCC3Q6UW78 93 aa7.92□□□□□ -1.14
CCDC40-210ENST00000573903 GATD1Q8NB37 220 aa7.92□□□□□ -1.14
CCDC40-210ENST00000573903 NUP35Q8NFH5 326 aa7.92□□□□□ -1.14
CCDC40-210ENST00000573903 TMEM191AQ9H0A3 160 aa7.92□□□□□ -1.14
CCDC40-210ENST00000573903 TRAV26-2A0A0B4J265 109 aa7.91□□□□□ -1.14
CCDC40-210ENST00000573903 A0A1B0GW15 77 aa7.91□□□□□ -1.14
CCDC40-210ENST00000573903 SMIM27A0A1W2PRY6 76 aa7.91□□□□□ -1.14
CCDC40-210ENST00000573903 DGAT2L7PQ6IED9 249 aa7.91□□□□□ -1.14
CCDC40-210ENST00000573903 S100A8P05109 93 aa7.9□□□□□ -1.14
CCDC40-210ENST00000573903 KRTAP10-4P60372 401 aaPredicted RBP7.9□□□□□ -1.14
CCDC40-210ENST00000573903 COTL1Q14019 142 aa7.9□□□□□ -1.14
CCDC40-210ENST00000573903 IQCJQ1A5X6 159 aa7.9□□□□□ -1.14
CCDC40-210ENST00000573903 CLPSL2Q6UWE3 100 aa7.9□□□□□ -1.14
CCDC40-210ENST00000573903 MRAP2Q96G30 205 aa7.9□□□□□ -1.14
CCDC40-210ENST00000573903 MT-ND4LP03901 98 aa7.89□□□□□ -1.15
CCDC40-210ENST00000573903 NTM-AS1Q6ZSK4 140 aa7.89□□□□□ -1.15
CCDC40-210ENST00000573903 RPL39LQ96EH5 51 aaKnown RBP7.89□□□□□ -1.15
CCDC40-210ENST00000573903 TMEM243Q9BU79 118 aa7.89□□□□□ -1.15
CCDC40-210ENST00000573903 UBE2L6O14933 153 aa7.88□□□□□ -1.15
CCDC40-210ENST00000573903 PRSS1P07477 247 aa7.88□□□□□ -1.15
CCDC40-210ENST00000573903 AMTP48728 403 aa7.88□□□□□ -1.15
CCDC40-210ENST00000573903 RBX1P62877 108 aa7.88□□□□□ -1.15
CCDC40-210ENST00000573903 HBBP68871 147 aa7.88□□□□□ -1.15
CCDC40-210ENST00000573903 GAGE6Q13070 117 aa7.88□□□□□ -1.15
CCDC40-210ENST00000573903 AMN1Q8IY45 258 aa7.88□□□□□ -1.15
CCDC40-210ENST00000573903 LINC00269Q8N2A0 174 aa7.88□□□□□ -1.15
CCDC40-210ENST00000573903 C9orf163Q8N9P6 203 aa7.88□□□□□ -1.15
CCDC40-210ENST00000573903 ANAPC16Q96DE5 110 aa7.88□□□□□ -1.15
CCDC40-210ENST00000573903 PLA2G2DQ9UNK4 145 aa7.88□□□□□ -1.15
CCDC40-210ENST00000573903 TRBV6-5A0A0K0K1A5 114 aa7.87□□□□□ -1.15
CCDC40-210ENST00000573903 SDHAF1A6NFY7 115 aa7.87□□□□□ -1.15
CCDC40-210ENST00000573903 F8W036 122 aa7.87□□□□□ -1.15
CCDC40-210ENST00000573903 NCR2O95944 276 aa7.87□□□□□ -1.15
CCDC40-210ENST00000573903 PPP1R17O96001 155 aa7.87□□□□□ -1.15
CCDC40-210ENST00000573903 RAB4AP20338 218 aa7.87□□□□□ -1.15
CCDC40-210ENST00000573903 CAMPP49913 170 aa7.87□□□□□ -1.15
CCDC40-210ENST00000573903 MRPL54Q6P161 138 aaKnown RBP7.87□□□□□ -1.15
CCDC40-210ENST00000573903 ATP5L2Q7Z4Y8 100 aa7.87□□□□□ -1.15
CCDC40-210ENST00000573903 COMMD7Q86VX2 200 aa7.87□□□□□ -1.15
CCDC40-210ENST00000573903 CLRN3Q8NCR9 226 aa7.87□□□□□ -1.15
CCDC40-210ENST00000573903 RNF185Q96GF1 192 aa7.87□□□□□ -1.15
CCDC40-210ENST00000573903 ST20Q9HBF5 79 aa7.87□□□□□ -1.15
CCDC40-210ENST00000573903 PRR34Q9NV39 138 aa7.87□□□□□ -1.15
CCDC40-210ENST00000573903 TMEM218A2RU14 115 aa7.86□□□□□ -1.15
CCDC40-210ENST00000573903 APCSP02743 223 aa7.86□□□□□ -1.15
CCDC40-210ENST00000573903 REG3AQ06141 175 aa7.86□□□□□ -1.15
CCDC40-210ENST00000573903 ADCYAP1P18509 176 aa7.85□□□□□ -1.15
CCDC40-210ENST00000573903 FAM104BQ5XKR9 115 aa7.85□□□□□ -1.15
CCDC40-210ENST00000573903 AP5S1Q9NUS5 200 aa7.85□□□□□ -1.15
CCDC40-210ENST00000573903 IGLV10-54A0A075B6I4 117 aa7.84□□□□□ -1.15
CCDC40-210ENST00000573903 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.84□□□□□ -1.15
CCDC40-210ENST00000573903 TRAV8-4A0A0B4J246 113 aa7.84□□□□□ -1.15
CCDC40-210ENST00000573903 A0A1B0GXF2 115 aa7.84□□□□□ -1.15
CCDC40-210ENST00000573903 hDV102S1A0JD36 115 aa7.84□□□□□ -1.15
CCDC40-210ENST00000573903 I3L3M4 83 aa7.84□□□□□ -1.15
CCDC40-210ENST00000573903 PMCHP20382 165 aa7.84□□□□□ -1.15
CCDC40-210ENST00000573903 DPH3Q96FX2 82 aa7.84□□□□□ -1.15
CCDC40-210ENST00000573903 SEC11CQ9BY50 192 aa7.84□□□□□ -1.15
CCDC40-210ENST00000573903 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.84□□□□□ -1.15
CCDC40-210ENST00000573903 A0A1B0GUV1 79 aa7.83□□□□□ -1.16
CCDC40-210ENST00000573903 LINC00862A6NCI5 91 aa7.83□□□□□ -1.16
CCDC40-210ENST00000573903 SMKR1H3BMG3 65 aa7.83□□□□□ -1.16
CCDC40-210ENST00000573903 CKS2P33552 79 aa7.83□□□□□ -1.16
CCDC40-210ENST00000573903 RPS10P46783 165 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms