RNA–Protein interactions for RNA: ENST00000573891.6

CACNA1A-203, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-203ENST00000573891 PRELID3AQ96N28 172 aa4.3□□□□□ -1.72
CACNA1A-203ENST00000573891 METTL26Q96S19 204 aa4.3□□□□□ -1.72
CACNA1A-203ENST00000573891 KRTAP3-1Q9BYR8 98 aa4.3□□□□□ -1.72
CACNA1A-203ENST00000573891 Q9H8V8 135 aa4.3□□□□□ -1.72
CACNA1A-203ENST00000573891 MRPL36Q9P0J6 103 aaKnown RBP4.3□□□□□ -1.72
CACNA1A-203ENST00000573891 DMBT1Q9UGM3 2413 aaPredicted RBP4.3□□□□□ -1.72
CACNA1A-203ENST00000573891 TRAV26-2A0A0B4J265 109 aa4.29□□□□□ -1.72
CACNA1A-203ENST00000573891 E9PLD3 99 aa4.29□□□□□ -1.72
CACNA1A-203ENST00000573891 NDUFC2-KCTD14E9PQ53 114 aa4.29□□□□□ -1.72
CACNA1A-203ENST00000573891 MRPS12O15235 138 aaKnown RBP4.29□□□□□ -1.72
CACNA1A-203ENST00000573891 RNASE2P10153 161 aaKnown RBP4.29□□□□□ -1.72
CACNA1A-203ENST00000573891 PFN2P35080 140 aa4.29□□□□□ -1.72
CACNA1A-203ENST00000573891 RPL18AQ02543 176 aaKnown RBP4.29□□□□□ -1.72
CACNA1A-203ENST00000573891 SPINK9Q5DT21 86 aa4.29□□□□□ -1.72
CACNA1A-203ENST00000573891 PSMG4Q5JS54 123 aa4.29□□□□□ -1.72
CACNA1A-203ENST00000573891 PIK3CD-AS1Q5SR53 167 aa4.29□□□□□ -1.72
CACNA1A-203ENST00000573891 PPDPFLQ8WWR9 84 aa4.29□□□□□ -1.72
CACNA1A-203ENST00000573891 RAB37Q96AX2 223 aa4.29□□□□□ -1.72
CACNA1A-203ENST00000573891 EIF5A2Q9GZV4 153 aaKnown RBP4.29□□□□□ -1.72
CACNA1A-203ENST00000573891 MANBALQ9NQG1 85 aa4.29□□□□□ -1.72
CACNA1A-203ENST00000573891 DNAH5Q8TE73 4624 aa4.29□□□□□ -1.72
CACNA1A-203ENST00000573891 APOBP04114 4563 aaKnown RBP4.29□□□□□ -1.72
CACNA1A-203ENST00000573891 IGLV2-18A0A075B6J9 118 aa4.28□□□□□ -1.72
CACNA1A-203ENST00000573891 C3orf85A0A1B0GTC6 90 aa4.28□□□□□ -1.72
CACNA1A-203ENST00000573891 H3BMM0 161 aa4.28□□□□□ -1.72
CACNA1A-203ENST00000573891 H3BUT2 72 aa4.28□□□□□ -1.72
CACNA1A-203ENST00000573891 IGKV1-5P01602 117 aa4.28□□□□□ -1.72
CACNA1A-203ENST00000573891 IL15RAQ13261 267 aa4.28□□□□□ -1.72
CACNA1A-203ENST00000573891 WFDC2Q14508 124 aa4.28□□□□□ -1.72
CACNA1A-203ENST00000573891 CYB561D1Q8N8Q1 229 aa4.28□□□□□ -1.72
CACNA1A-203ENST00000573891 PRR26Q8N8Z3 221 aa4.28□□□□□ -1.72
CACNA1A-203ENST00000573891 FMC1Q96HJ9 113 aa4.28□□□□□ -1.72
CACNA1A-203ENST00000573891 NAA60Q9H7X0 242 aa4.28□□□□□ -1.72
CACNA1A-203ENST00000573891 NRN1Q9NPD7 142 aa4.28□□□□□ -1.72
CACNA1A-203ENST00000573891 SCRT2Q9NQ03 307 aa4.28□□□□□ -1.72
CACNA1A-203ENST00000573891 XCL2Q9UBD3 114 aa4.28□□□□□ -1.72
CACNA1A-203ENST00000573891 FAM236AA0A1B0GUQ0 79 aa4.27□□□□□ -1.73
CACNA1A-203ENST00000573891 FAM236BA0A1B0GV22 79 aa4.27□□□□□ -1.73
CACNA1A-203ENST00000573891 CDK2AP2O75956 126 aa4.27□□□□□ -1.73
CACNA1A-203ENST00000573891 C3orf79P0CE67 100 aa4.27□□□□□ -1.73
CACNA1A-203ENST00000573891 SPART-AS1P0CW21 52 aa4.27□□□□□ -1.73
CACNA1A-203ENST00000573891 HLA-DRB4P13762 266 aa4.27□□□□□ -1.73
CACNA1A-203ENST00000573891 SUB1P53999 127 aaKnown RBP eCLIP4.27□□□□□ -1.73
CACNA1A-203ENST00000573891 SNRPD3P62318 126 aaKnown RBP4.27□□□□□ -1.73
CACNA1A-203ENST00000573891 NMSQ5H8A3 153 aa4.27□□□□□ -1.73
CACNA1A-203ENST00000573891 C1orf134Q5TEV5 83 aa4.27□□□□□ -1.73
CACNA1A-203ENST00000573891 CYP2G1PQ6ZSU1 146 aa4.27□□□□□ -1.73
CACNA1A-203ENST00000573891 C2orf91Q6ZV80 131 aa4.27□□□□□ -1.73
CACNA1A-203ENST00000573891 UBE2DNLQ8IWF7 75 aa4.27□□□□□ -1.73
CACNA1A-203ENST00000573891 OR10G8Q8NGN5 311 aa4.27□□□□□ -1.73
CACNA1A-203ENST00000573891 TMEM230Q96A57 120 aa4.27□□□□□ -1.73
CACNA1A-203ENST00000573891 HLA-DRB4X5D2U9 266 aa4.27□□□□□ -1.73
CACNA1A-203ENST00000573891 HERC1Q15751 4861 aa4.27□□□□□ -1.73
CACNA1A-203ENST00000573891 TRBV20-1A0A075B6N2 111 aa4.26□□□□□ -1.73
CACNA1A-203ENST00000573891 BUB3O43684 328 aa4.26□□□□□ -1.73
CACNA1A-203ENST00000573891 SNCGO76070 127 aa4.26□□□□□ -1.73
CACNA1A-203ENST00000573891 APOMO95445 188 aa4.26□□□□□ -1.73
CACNA1A-203ENST00000573891 MT-ND6P03923 174 aa4.26□□□□□ -1.73
CACNA1A-203ENST00000573891 GATA2P23769 480 aaPredicted RBP4.26□□□□□ -1.73
CACNA1A-203ENST00000573891 GALR1P47211 349 aa4.26□□□□□ -1.73
CACNA1A-203ENST00000573891 PSMB3P49720 205 aa4.26□□□□□ -1.73
CACNA1A-203ENST00000573891 ETDBQ3ZM63 59 aa4.26□□□□□ -1.73
CACNA1A-203ENST00000573891 C9orf153Q5TBE3 101 aa4.26□□□□□ -1.73
CACNA1A-203ENST00000573891 FAM222AQ5U5X8 452 aa4.26□□□□□ -1.73
CACNA1A-203ENST00000573891 SUMO4Q6EEV6 95 aa4.26□□□□□ -1.73
CACNA1A-203ENST00000573891 GAGE2AQ6NT46 116 aa4.26□□□□□ -1.73
CACNA1A-203ENST00000573891 PRR15Q8IV56 129 aa4.26□□□□□ -1.73
CACNA1A-203ENST00000573891 LINC00479Q96M42 142 aa4.26□□□□□ -1.73
CACNA1A-203ENST00000573891 SCGB3A2Q96PL1 93 aa4.26□□□□□ -1.73
CACNA1A-203ENST00000573891 AGPAT4-IT1Q9H0P7 198 aa4.26□□□□□ -1.73
CACNA1A-203ENST00000573891 TRBV19A0A075B6N1 114 aa4.25□□□□□ -1.73
CACNA1A-203ENST00000573891 TRAV4A0A0B4J268 109 aa4.25□□□□□ -1.73
CACNA1A-203ENST00000573891 A0A0G2JRQ6 117 aa4.25□□□□□ -1.73
CACNA1A-203ENST00000573891 TRBV7-6A0A0J9YX20 115 aa4.25□□□□□ -1.73
CACNA1A-203ENST00000573891 C16orf90A8MZG2 172 aa4.25□□□□□ -1.73
CACNA1A-203ENST00000573891 SERF1AO75920 110 aa4.25□□□□□ -1.73
CACNA1A-203ENST00000573891 IL4P05112 153 aa4.25□□□□□ -1.73
CACNA1A-203ENST00000573891 COX8AP10176 69 aa4.25□□□□□ -1.73
CACNA1A-203ENST00000573891 FGF6P10767 208 aa4.25□□□□□ -1.73
CACNA1A-203ENST00000573891 C2orf83Q53S99 150 aa4.25□□□□□ -1.73
CACNA1A-203ENST00000573891 GDF5OSQ5U4N7 250 aa4.25□□□□□ -1.73
CACNA1A-203ENST00000573891 TEN1Q86WV5 123 aa4.25□□□□□ -1.73
CACNA1A-203ENST00000573891 C10orf126Q8N4M7 172 aa4.25□□□□□ -1.73
CACNA1A-203ENST00000573891 MAPKAPK5-AS1Q8N8E1 139 aa4.25□□□□□ -1.73
CACNA1A-203ENST00000573891 KCNS1Q96KK3 526 aa4.25□□□□□ -1.73
CACNA1A-203ENST00000573891 KCNIP2Q9NS61 270 aa4.25□□□□□ -1.73
CACNA1A-203ENST00000573891 NACAE9PAV3 2078 aa4.25□□□□□ -1.73
CACNA1A-203ENST00000573891 TRAV12-2A0A075B6T6 113 aa4.24□□□□□ -1.73
CACNA1A-203ENST00000573891 IGHV3OR16-12A0A075B7B8 117 aa4.24□□□□□ -1.73
CACNA1A-203ENST00000573891 H7C1H1 209 aa4.24□□□□□ -1.73
CACNA1A-203ENST00000573891 SOCS3O14543 225 aa4.24□□□□□ -1.73
CACNA1A-203ENST00000573891 ZNF324O75467 553 aaPredicted RBP4.24□□□□□ -1.73
CACNA1A-203ENST00000573891 IGKV3-20P01619 116 aa4.24□□□□□ -1.73
CACNA1A-203ENST00000573891 COX7CP15954 63 aa4.24□□□□□ -1.73
CACNA1A-203ENST00000573891 DEFB1P60022 68 aa4.24□□□□□ -1.73
CACNA1A-203ENST00000573891 SP6Q3SY56 376 aa4.24□□□□□ -1.73
CACNA1A-203ENST00000573891 CFAP126Q5VTH2 177 aa4.24□□□□□ -1.73
CACNA1A-203ENST00000573891 MRPL55Q7Z7F7 128 aaKnown RBP4.24□□□□□ -1.73
CACNA1A-203ENST00000573891 Q8N1X5 172 aa4.24□□□□□ -1.73
CACNA1A-203ENST00000573891 ANKRD29Q8N6D5 301 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms