RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 KIF25-AS1Q9Y6Z4 181 aa3.42□□□□□ -1.86
CDC27-215ENST00000573550 ARHGAP32A7KAX9 2087 aa3.42□□□□□ -1.86
CDC27-215ENST00000573550 DOPEY1Q5JWR5 2465 aa3.42□□□□□ -1.86
CDC27-215ENST00000573550 DMXL2Q8TDJ6 3036 aa3.41□□□□□ -1.86
CDC27-215ENST00000573550 IGHV3-35A0A0C4DH35 117 aa3.41□□□□□ -1.86
CDC27-215ENST00000573550 A0A0J9YX75 114 aa3.41□□□□□ -1.86
CDC27-215ENST00000573550 IGIPA6NJ69 53 aa3.41□□□□□ -1.86
CDC27-215ENST00000573550 RNASE3P12724 160 aaKnown RBP3.41□□□□□ -1.86
CDC27-215ENST00000573550 S100A4P26447 101 aaKnown RBP3.41□□□□□ -1.86
CDC27-215ENST00000573550 POLR2KP53803 58 aaKnown RBP3.41□□□□□ -1.86
CDC27-215ENST00000573550 LINC00315P59091 139 aa3.41□□□□□ -1.86
CDC27-215ENST00000573550 PMVKQ15126 192 aa3.41□□□□□ -1.86
CDC27-215ENST00000573550 C12orf74Q32Q52 190 aa3.41□□□□□ -1.86
CDC27-215ENST00000573550 CLEC2AQ6UVW9 174 aa3.41□□□□□ -1.86
CDC27-215ENST00000573550 UNQ9165/PRO28630Q6UXU0 137 aa3.41□□□□□ -1.86
CDC27-215ENST00000573550 C10orf105Q8TEF2 133 aa3.41□□□□□ -1.86
CDC27-215ENST00000573550 C9orf85Q96MD7 179 aa3.41□□□□□ -1.86
CDC27-215ENST00000573550 HIST1H4GQ99525 98 aa3.41□□□□□ -1.86
CDC27-215ENST00000573550 KIR2DL4Q99706 377 aa3.41□□□□□ -1.86
CDC27-215ENST00000573550 VCX2Q9H322 139 aa3.41□□□□□ -1.86
CDC27-215ENST00000573550 NHP2Q9NX24 153 aaKnown RBP3.41□□□□□ -1.86
CDC27-215ENST00000573550 DHRS4-AS1Q9P1J3 65 aa3.41□□□□□ -1.86
CDC27-215ENST00000573550 ZNF256Q9Y2P7 627 aaPredicted RBP3.41□□□□□ -1.86
CDC27-215ENST00000573550 SPTBN1Q01082 2364 aaKnown RBP3.41□□□□□ -1.86
CDC27-215ENST00000573550 TACC2O95359 2948 aa3.41□□□□□ -1.86
CDC27-215ENST00000573550 DCHS2Q6V1P9 2916 aa3.41□□□□□ -1.86
CDC27-215ENST00000573550 ATRXP46100 2492 aa3.41□□□□□ -1.86
CDC27-215ENST00000573550 IGLV4-69A0A075B6H9 119 aa3.4□□□□□ -1.87
CDC27-215ENST00000573550 TRBV20-1A0A075B6N2 111 aa3.4□□□□□ -1.87
CDC27-215ENST00000573550 IGHV3OR16-8A0A075B7F1 116 aa3.4□□□□□ -1.87
CDC27-215ENST00000573550 TRAV2A0A0B4J234 112 aa3.4□□□□□ -1.87
CDC27-215ENST00000573550 TRAV26-2A0A0B4J265 109 aa3.4□□□□□ -1.87
CDC27-215ENST00000573550 J3QLI3 93 aa3.4□□□□□ -1.87
CDC27-215ENST00000573550 LGALS1P09382 135 aaKnown RBP3.4□□□□□ -1.87
CDC27-215ENST00000573550 RNASE4P34096 147 aaKnown RBP3.4□□□□□ -1.87
CDC27-215ENST00000573550 FXYD7P58549 80 aa3.4□□□□□ -1.87
CDC27-215ENST00000573550 DCANP1Q8TF63 244 aa3.4□□□□□ -1.87
CDC27-215ENST00000573550 PTH2Q96A98 100 aa3.4□□□□□ -1.87
CDC27-215ENST00000573550 RAB37Q96AX2 223 aa3.4□□□□□ -1.87
CDC27-215ENST00000573550 LINC01600Q96MT4 127 aa3.4□□□□□ -1.87
CDC27-215ENST00000573550 PRADC1Q9BSG0 188 aa3.4□□□□□ -1.87
CDC27-215ENST00000573550 RHPN1-AS1Q9BWJ2 59 aa3.4□□□□□ -1.87
CDC27-215ENST00000573550 PRORYQ9H606 182 aa3.4□□□□□ -1.87
CDC27-215ENST00000573550 PRO0461Q9UI25 63 aa3.4□□□□□ -1.87
CDC27-215ENST00000573550 SMG1Q96Q15 3661 aaKnown RBP3.4□□□□□ -1.87
CDC27-215ENST00000573550 ITPR1Q14643 2758 aa3.4□□□□□ -1.87
CDC27-215ENST00000573550 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.39□□□□□ -1.875e-8■■■□□ 15.2
CDC27-215ENST00000573550 LAMA5O15230 3695 aa3.39□□□□□ -1.87
CDC27-215ENST00000573550 NBASA2RRP1 2371 aa3.39□□□□□ -1.87
CDC27-215ENST00000573550 IGHV3-66A0A0C4DH42 116 aa3.39□□□□□ -1.87
CDC27-215ENST00000573550 SDHAF1A6NFY7 115 aa3.39□□□□□ -1.87
CDC27-215ENST00000573550 ZNF815PA8K554 130 aa3.39□□□□□ -1.87
CDC27-215ENST00000573550 A8MTW9 85 aa3.39□□□□□ -1.87
CDC27-215ENST00000573550 B4DSR2 109 aa3.39□□□□□ -1.87
CDC27-215ENST00000573550 H3BMG7 143 aa3.39□□□□□ -1.87
CDC27-215ENST00000573550 K7ERJ3 54 aa3.39□□□□□ -1.87
CDC27-215ENST00000573550 DUSP14O95147 198 aaKnown RBP3.39□□□□□ -1.87
CDC27-215ENST00000573550 MSMBP08118 114 aa3.39□□□□□ -1.87
CDC27-215ENST00000573550 MGPP08493 103 aa3.39□□□□□ -1.87
CDC27-215ENST00000573550 CD7P09564 240 aa3.39□□□□□ -1.87
CDC27-215ENST00000573550 PSMB8P28062 276 aa3.39□□□□□ -1.87
CDC27-215ENST00000573550 UBE2D3P61077 147 aa3.39□□□□□ -1.87
CDC27-215ENST00000573550 SNRPD3P62318 126 aaKnown RBP3.39□□□□□ -1.87
CDC27-215ENST00000573550 UBE2D2P62837 147 aa3.39□□□□□ -1.87
CDC27-215ENST00000573550 MORN3Q6PF18 240 aaPredicted RBP3.39□□□□□ -1.87
CDC27-215ENST00000573550 FAM159AQ6UWV7 190 aa3.39□□□□□ -1.87
CDC27-215ENST00000573550 ZFP2Q6ZN57 461 aa3.39□□□□□ -1.87
CDC27-215ENST00000573550 C14orf178Q8N769 122 aaPredicted RBP3.39□□□□□ -1.87
CDC27-215ENST00000573550 DLX4Q92988 240 aaPredicted RBP3.39□□□□□ -1.87
CDC27-215ENST00000573550 LRBAP50851 2863 aa3.39□□□□□ -1.87
CDC27-215ENST00000573550 CACNA1AO00555 2505 aa3.38□□□□□ -1.87
CDC27-215ENST00000573550 IGHV3OR16-13A0A075B7E8 117 aa3.38□□□□□ -1.87
CDC27-215ENST00000573550 IGHV3-49A0A0A0MS15 119 aa3.38□□□□□ -1.87
CDC27-215ENST00000573550 IGHV3-74A0A0B4J1X5 117 aa3.38□□□□□ -1.87
CDC27-215ENST00000573550 A0A0B4J2C4 111 aa3.38□□□□□ -1.87
CDC27-215ENST00000573550 A0A0J9YY99 117 aa3.38□□□□□ -1.87
CDC27-215ENST00000573550 TMEM238C9JI98 176 aa3.38□□□□□ -1.87
CDC27-215ENST00000573550 H3BUX3 64 aa3.38□□□□□ -1.87
CDC27-215ENST00000573550 TRBV12-3P01733 135 aa3.38□□□□□ -1.87
CDC27-215ENST00000573550 CRYGDP07320 174 aa3.38□□□□□ -1.87
CDC27-215ENST00000573550 TCTAP57738 103 aa3.38□□□□□ -1.87
CDC27-215ENST00000573550 SCGB2A2Q13296 93 aa3.38□□□□□ -1.87
CDC27-215ENST00000573550 CFAP126Q5VTH2 177 aa3.38□□□□□ -1.87
CDC27-215ENST00000573550 SCGB1D4Q6XE38 83 aa3.38□□□□□ -1.87
CDC27-215ENST00000573550 SBSPONQ8IVN8 264 aa3.38□□□□□ -1.87
CDC27-215ENST00000573550 SLC25A29Q8N8R3 303 aa3.38□□□□□ -1.87
CDC27-215ENST00000573550 PLEKHB2Q96CS7 222 aa3.38□□□□□ -1.87
CDC27-215ENST00000573550 RPL39LQ96EH5 51 aaKnown RBP3.38□□□□□ -1.87
CDC27-215ENST00000573550 CCL19Q99731 98 aa3.38□□□□□ -1.87
CDC27-215ENST00000573550 SPAG8Q99932 426 aaPredicted RBP3.38□□□□□ -1.87
CDC27-215ENST00000573550 LINC00467Q9BRT7 94 aa3.38□□□□□ -1.87
CDC27-215ENST00000573550 TTTY13Q9BZ97 58 aa3.38□□□□□ -1.87
CDC27-215ENST00000573550 MRPL16Q9NX20 251 aaKnown RBP3.38□□□□□ -1.87
CDC27-215ENST00000573550 TP53TG1Q9Y2A0 90 aa3.38□□□□□ -1.87
CDC27-215ENST00000573550 MUC4Q99102 2169 aa3.37□□□□□ -1.87
CDC27-215ENST00000573550 IGHV1OR15-1A0A075B7D0 117 aa3.37□□□□□ -1.87
CDC27-215ENST00000573550 FAM168BA1KXE4 195 aa3.37□□□□□ -1.87
CDC27-215ENST00000573550 A4D1N5 150 aa3.37□□□□□ -1.87
CDC27-215ENST00000573550 M0QY20 66 aa3.37□□□□□ -1.87
CDC27-215ENST00000573550 LEPROTO15243 131 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms