RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 J3QKU1 62 aa9.34□□□□□ -0.91
PCDHGA9-201ENST00000573521 IGLV4-3A0A075B6K6 122 aa9.34□□□□□ -0.91
PCDHGA9-201ENST00000573521 LYRM9A8MSI8 78 aa9.34□□□□□ -0.91
PCDHGA9-201ENST00000573521 CRIP1P50238 77 aa9.34□□□□□ -0.91
PCDHGA9-201ENST00000573521 DAND5Q8N907 189 aa9.34□□□□□ -0.91
PCDHGA9-201ENST00000573521 MUC6Q6W4X9 2439 aa9.34□□□□□ -0.91
PCDHGA9-201ENST00000573521 NDUFC1O43677 76 aa9.34□□□□□ -0.91
PCDHGA9-201ENST00000573521 C2orf91Q6ZV80 131 aa9.34□□□□□ -0.91
PCDHGA9-201ENST00000573521 M0QY20 66 aa9.33□□□□□ -0.92
PCDHGA9-201ENST00000573521 UNQ9165/PRO28630Q6UXU0 137 aa9.33□□□□□ -0.92
PCDHGA9-201ENST00000573521 HIGD2BQ4VC39 106 aa9.33□□□□□ -0.92
PCDHGA9-201ENST00000573521 MAP6D1Q9H9H5 199 aa9.33□□□□□ -0.92
PCDHGA9-201ENST00000573521 ZNF580Q9UK33 172 aa9.33□□□□□ -0.92
PCDHGA9-201ENST00000573521 COL6A6A6NMZ7 2263 aa9.33□□□□□ -0.92
PCDHGA9-201ENST00000573521 TRBV6-4A0A1B0GX49 114 aa9.33□□□□□ -0.92
PCDHGA9-201ENST00000573521 SPAG11BQ08648 103 aa9.33□□□□□ -0.92
PCDHGA9-201ENST00000573521 Q8NA96 180 aa9.33□□□□□ -0.92
PCDHGA9-201ENST00000573521 ZGRF1Q86YA3 2104 aa9.33□□□□□ -0.92
PCDHGA9-201ENST00000573521 NRACQ8N912 160 aa9.32□□□□□ -0.92
PCDHGA9-201ENST00000573521 NACAE9PAV3 2078 aa9.32□□□□□ -0.92
PCDHGA9-201ENST00000573521 DYSFO75923 2080 aa9.32□□□□□ -0.92
PCDHGA9-201ENST00000573521 A0A0C4DFX4 3053 aa9.32□□□□□ -0.92
PCDHGA9-201ENST00000573521 CLUHP3Q96NS8 147 aa9.32□□□□□ -0.92
PCDHGA9-201ENST00000573521 EYSQ5T1H1 3165 aa9.32□□□□□ -0.92
PCDHGA9-201ENST00000573521 POLR2KP53803 58 aaKnown RBP9.32□□□□□ -0.92
PCDHGA9-201ENST00000573521 C1orf229Q6ZS94 237 aaPredicted RBP9.32□□□□□ -0.92
PCDHGA9-201ENST00000573521 APRG1Q8IVJ8 170 aa9.32□□□□□ -0.92
PCDHGA9-201ENST00000573521 RS1O15537 224 aa9.31□□□□□ -0.92
PCDHGA9-201ENST00000573521 KLLNB2CW77 178 aa9.31□□□□□ -0.92
PCDHGA9-201ENST00000573521 CCL18P55774 89 aa9.31□□□□□ -0.92
PCDHGA9-201ENST00000573521 CFAP126Q5VTH2 177 aa9.31□□□□□ -0.92
PCDHGA9-201ENST00000573521 LINC00308Q8TCZ7 52 aa9.31□□□□□ -0.92
PCDHGA9-201ENST00000573521 IGKV2D-24A0A075B6R9 120 aa9.3□□□□□ -0.92
PCDHGA9-201ENST00000573521 WDR87Q6ZQQ6 2873 aa9.3□□□□□ -0.92
PCDHGA9-201ENST00000573521 M0QXV9 152 aa9.3□□□□□ -0.92
PCDHGA9-201ENST00000573521 COX7BP24311 80 aa9.3□□□□□ -0.92
PCDHGA9-201ENST00000573521 CLEC2BQ92478 149 aa9.3□□□□□ -0.92
PCDHGA9-201ENST00000573521 TRIOO75962 3097 aa9.3□□□□□ -0.92
PCDHGA9-201ENST00000573521 CACNA1GO43497 2377 aa9.3□□□□□ -0.92
PCDHGA9-201ENST00000573521 CLPSL1A2RUU4 121 aa9.3□□□□□ -0.92
PCDHGA9-201ENST00000573521 IGHV3-30P01768 117 aa9.3□□□□□ -0.92
PCDHGA9-201ENST00000573521 IGHV3-30-5P0DP03 117 aa9.3□□□□□ -0.92
PCDHGA9-201ENST00000573521 DOPEY2Q9Y3R5 2298 aa9.3□□□□□ -0.92
PCDHGA9-201ENST00000573521 PCNX1Q96RV3 2341 aa9.3□□□□□ -0.92
PCDHGA9-201ENST00000573521 CRIP2P52943 208 aaPredicted RBP9.3□□□□□ -0.92
PCDHGA9-201ENST00000573521 C11orf71Q6IPW1 123 aa9.3□□□□□ -0.92
PCDHGA9-201ENST00000573521 FREM1Q5H8C1 2179 aa9.3□□□□□ -0.92
PCDHGA9-201ENST00000573521 SMAD5-AS1Q9Y6J3 95 aa9.29□□□□□ -0.92
PCDHGA9-201ENST00000573521 C3orf22Q8N5N4 141 aa9.29□□□□□ -0.92
PCDHGA9-201ENST00000573521 RNF183Q96D59 192 aa9.29□□□□□ -0.92
PCDHGA9-201ENST00000573521 PCDH15Q96QU1 1955 aa9.29□□□□□ -0.92
PCDHGA9-201ENST00000573521 DEFB121Q5J5C9 76 aa9.28□□□□□ -0.92
PCDHGA9-201ENST00000573521 IGKV3D-7A0A0C4DH55 119 aa9.28□□□□□ -0.92
PCDHGA9-201ENST00000573521 LST1O00453 97 aa9.28□□□□□ -0.92
PCDHGA9-201ENST00000573521 C9orf85Q96MD7 179 aa9.28□□□□□ -0.92
PCDHGA9-201ENST00000573521 Q6YL49 198 aa9.28□□□□□ -0.92
PCDHGA9-201ENST00000573521 PLCE1Q9P212 2302 aa9.28□□□□□ -0.92
PCDHGA9-201ENST00000573521 C14orf177Q52M58 125 aa9.28□□□□□ -0.92
PCDHGA9-201ENST00000573521 IGKV2D-26A0A0A0MRZ7 120 aa9.27□□□□□ -0.92
PCDHGA9-201ENST00000573521 TRBV12-3P01733 135 aa9.27□□□□□ -0.93
PCDHGA9-201ENST00000573521 UBE2BP63146 152 aa9.27□□□□□ -0.93
PCDHGA9-201ENST00000573521 Q6ZQT7 251 aa9.27□□□□□ -0.93
PCDHGA9-201ENST00000573521 DEFB136Q30KP8 78 aa9.27□□□□□ -0.93
PCDHGA9-201ENST00000573521 Q8N976 141 aa9.27□□□□□ -0.93
PCDHGA9-201ENST00000573521 MAPKAPK5-AS1Q8N8E1 139 aa9.26□□□□□ -0.93
PCDHGA9-201ENST00000573521 ANKHD1Q8IWZ3 2542 aaKnown RBP9.26□□□□□ -0.93
PCDHGA9-201ENST00000573521 DEFB114Q30KQ6 69 aa9.26□□□□□ -0.93
PCDHGA9-201ENST00000573521 PTH2Q96A98 100 aa9.26□□□□□ -0.93
PCDHGA9-201ENST00000573521 PSMG3-AS1Q96PY0 264 aa9.26□□□□□ -0.93
PCDHGA9-201ENST00000573521 CDKN2A-AS1Q9UH64 79 aa9.26□□□□□ -0.93
PCDHGA9-201ENST00000573521 LINC00310P59036 64 aa9.25□□□□□ -0.93
PCDHGA9-201ENST00000573521 SPRY2O43597 315 aa9.25□□□□□ -0.93
PCDHGA9-201ENST00000573521 TRIAP1O43715 76 aa9.25□□□□□ -0.93
PCDHGA9-201ENST00000573521 MT-ATP8P03928 68 aa9.25□□□□□ -0.93
PCDHGA9-201ENST00000573521 COX17Q14061 63 aa9.25□□□□□ -0.93
PCDHGA9-201ENST00000573521 MRPS12O15235 138 aaKnown RBP9.24□□□□□ -0.93
PCDHGA9-201ENST00000573521 MED12LQ86YW9 2145 aa9.24□□□□□ -0.93
PCDHGA9-201ENST00000573521 SPTBN5Q9NRC6 3674 aaKnown RBP9.24□□□□□ -0.93
PCDHGA9-201ENST00000573521 CLPSL2Q6UWE3 100 aa9.24□□□□□ -0.93
PCDHGA9-201ENST00000573521 MAPK1IP1LQ8NDC0 245 aa9.24□□□□□ -0.93
PCDHGA9-201ENST00000573521 PRORYQ9H606 182 aa9.24□□□□□ -0.93
PCDHGA9-201ENST00000573521 ZFHX2Q9C0A1 2572 aaPredicted RBP9.24□□□□□ -0.93
PCDHGA9-201ENST00000573521 RNASE3P12724 160 aaKnown RBP9.24□□□□□ -0.93
PCDHGA9-201ENST00000573521 SERP2Q8N6R1 65 aa9.23□□□□□ -0.93
PCDHGA9-201ENST00000573521 LINC00467Q9BRT7 94 aa9.23□□□□□ -0.93
PCDHGA9-201ENST00000573521 V9GYY9 64 aa9.23□□□□□ -0.93
PCDHGA9-201ENST00000573521 ATG2AQ2TAZ0 1938 aa9.23□□□□□ -0.93
PCDHGA9-201ENST00000573521 C20orf173Q96LM9 149 aa9.23□□□□□ -0.93
PCDHGA9-201ENST00000573521 TSHBP01222 138 aa9.23□□□□□ -0.93
PCDHGA9-201ENST00000573521 UPK3BQ9BT76 320 aa9.22□□□□□ -0.93
PCDHGA9-201ENST00000573521 NBASA2RRP1 2371 aa9.22□□□□□ -0.93
PCDHGA9-201ENST00000573521 TRBV6-8A0A0A6YYG3 113 aa9.22□□□□□ -0.93
PCDHGA9-201ENST00000573521 VCANP13611 3396 aa9.22□□□□□ -0.93
PCDHGA9-201ENST00000573521 TEX49A0A1B0GTD5 131 aa9.22□□□□□ -0.93
PCDHGA9-201ENST00000573521 IGLV1-40P01703 118 aa9.22□□□□□ -0.93
PCDHGA9-201ENST00000573521 UBE2D1P51668 147 aa9.22□□□□□ -0.93
PCDHGA9-201ENST00000573521 MRAPQ8TCY5 172 aa9.22□□□□□ -0.93
PCDHGA9-201ENST00000573521 TNCP24821 2201 aa9.22□□□□□ -0.93
PCDHGA9-201ENST00000573521 BPY2O14599 106 aa9.22□□□□□ -0.93
PCDHGA9-201ENST00000573521 PLA2G5P39877 138 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms