RNA–Protein interactions for RNA: ENST00000572665.1

CIITA-208, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-208ENST00000572665 TRBV6-1A0A0K0K1D8 114 aa6.08□□□□□ -1.44
CIITA-208ENST00000572665 M0R036 132 aa6.08□□□□□ -1.44
CIITA-208ENST00000572665 M0R381 172 aa6.08□□□□□ -1.44
CIITA-208ENST00000572665 LECT2O14960 151 aa6.08□□□□□ -1.44
CIITA-208ENST00000572665 SH2D1AO60880 128 aa6.08□□□□□ -1.44
CIITA-208ENST00000572665 CRPP02741 224 aa6.08□□□□□ -1.44
CIITA-208ENST00000572665 SULT1A2P50226 295 aa6.08□□□□□ -1.44
CIITA-208ENST00000572665 TMEM97Q5BJF2 176 aa6.08□□□□□ -1.44
CIITA-208ENST00000572665 C14orf178Q8N769 122 aaPredicted RBP6.08□□□□□ -1.44
CIITA-208ENST00000572665 FAM213BQ8TBF2 198 aa6.08□□□□□ -1.44
CIITA-208ENST00000572665 BAALCQ8WXS3 180 aa6.08□□□□□ -1.44
CIITA-208ENST00000572665 ZC2HC1AQ96GY0 325 aa6.08□□□□□ -1.44
CIITA-208ENST00000572665 SAMD10Q9BYL1 202 aa6.08□□□□□ -1.44
CIITA-208ENST00000572665 KLK12Q9UKR0 248 aa6.08□□□□□ -1.44
CIITA-208ENST00000572665 TRAV1-1A0A0B4J248 108 aa6.07□□□□□ -1.44
CIITA-208ENST00000572665 TMEM262E9PQX1 116 aa6.07□□□□□ -1.44
CIITA-208ENST00000572665 AKR1C3P42330 323 aa6.07□□□□□ -1.44
CIITA-208ENST00000572665 RAB4BP61018 213 aa6.07□□□□□ -1.44
CIITA-208ENST00000572665 ZNF674Q2M3X9 581 aa6.07□□□□□ -1.44
CIITA-208ENST00000572665 SFT2D1Q8WV19 159 aa6.07□□□□□ -1.44
CIITA-208ENST00000572665 UBE2WQ96B02 151 aa6.07□□□□□ -1.44
CIITA-208ENST00000572665 JPT2Q9H910 190 aa6.07□□□□□ -1.44
CIITA-208ENST00000572665 A4D1N5 150 aa6.06□□□□□ -1.44
CIITA-208ENST00000572665 GRIFINA4D1Z8 144 aa6.06□□□□□ -1.44
CIITA-208ENST00000572665 LTAP01374 205 aa6.06□□□□□ -1.44
CIITA-208ENST00000572665 ZNF56Q15929 161 aa6.06□□□□□ -1.44
CIITA-208ENST00000572665 TMSB15BA0A087X1C1 80 aa6.05□□□□□ -1.44
CIITA-208ENST00000572665 CXCL1P09341 107 aa6.05□□□□□ -1.44
CIITA-208ENST00000572665 SMIM17P0DL12 118 aa6.05□□□□□ -1.44
CIITA-208ENST00000572665 CRIP1P50238 77 aa6.05□□□□□ -1.44
CIITA-208ENST00000572665 UBE2D3P61077 147 aa6.05□□□□□ -1.44
CIITA-208ENST00000572665 UBE2D2P62837 147 aa6.05□□□□□ -1.44
CIITA-208ENST00000572665 WFDC2Q14508 124 aa6.05□□□□□ -1.44
CIITA-208ENST00000572665 ATRAIDQ6UW56 229 aa6.05□□□□□ -1.44
CIITA-208ENST00000572665 ALKAL2Q6UX46 152 aa6.05□□□□□ -1.44
CIITA-208ENST00000572665 OR10G8Q8NGN5 311 aa6.05□□□□□ -1.44
CIITA-208ENST00000572665 CHAC1Q9BUX1 264 aa6.05□□□□□ -1.44
CIITA-208ENST00000572665 TRBV6-8A0A0A6YYG3 113 aa6.04□□□□□ -1.44
CIITA-208ENST00000572665 CCL20P78556 96 aa6.04□□□□□ -1.44
CIITA-208ENST00000572665 MIAQ16674 131 aa6.04□□□□□ -1.44
CIITA-208ENST00000572665 SPANXN1Q5VSR9 72 aa6.04□□□□□ -1.44
CIITA-208ENST00000572665 SCXQ7RTU7 201 aa6.04□□□□□ -1.44
CIITA-208ENST00000572665 LYPD6BQ8NI32 183 aa6.04□□□□□ -1.44
CIITA-208ENST00000572665 VPS13BQ7Z7G8 4022 aa6.04□□□□□ -1.44
CIITA-208ENST00000572665 TEX46H3BTG2 121 aa6.03□□□□□ -1.44
CIITA-208ENST00000572665 IGLV2-8P01709 118 aa6.03□□□□□ -1.44
CIITA-208ENST00000572665 ANGP03950 147 aaKnown RBP6.03□□□□□ -1.44
CIITA-208ENST00000572665 PRAC1Q96KF2 57 aa6.03□□□□□ -1.44
CIITA-208ENST00000572665 CHCHD5Q9BSY4 110 aa6.03□□□□□ -1.44
CIITA-208ENST00000572665 MANBALQ9NQG1 85 aa6.03□□□□□ -1.44
CIITA-208ENST00000572665 Q9UF83 564 aa6.03□□□□□ -1.44
CIITA-208ENST00000572665 FLG2Q5D862 2391 aaPredicted RBP6.03□□□□□ -1.44
CIITA-208ENST00000572665 A0A1B0GV50 99 aa6.02□□□□□ -1.45
CIITA-208ENST00000572665 H7C1H1 209 aa6.02□□□□□ -1.45
CIITA-208ENST00000572665 OXTP01178 125 aa6.02□□□□□ -1.45
CIITA-208ENST00000572665 OR5AL1P0C617 328 aa6.02□□□□□ -1.45
CIITA-208ENST00000572665 TEX261Q6UWH6 196 aa6.02□□□□□ -1.45
CIITA-208ENST00000572665 BAGE2Q86Y30 109 aa6.02□□□□□ -1.45
CIITA-208ENST00000572665 C15orf54Q8N8G6 183 aa6.02□□□□□ -1.45
CIITA-208ENST00000572665 AP1S3Q96PC3 154 aa6.02□□□□□ -1.45
CIITA-208ENST00000572665 TRBV25-1A0A075B6N4 114 aa6.01□□□□□ -1.45
CIITA-208ENST00000572665 SNAI2O43623 268 aa6.01□□□□□ -1.45
CIITA-208ENST00000572665 HLA-DQA1P01909 254 aa6.01□□□□□ -1.45
CIITA-208ENST00000572665 CFC1BP0CG36 223 aa6.01□□□□□ -1.45
CIITA-208ENST00000572665 CFC1P0CG37 223 aa6.01□□□□□ -1.45
CIITA-208ENST00000572665 LINC01620Q4KN68 170 aa6.01□□□□□ -1.45
CIITA-208ENST00000572665 MPV17L2Q567V2 206 aa6.01□□□□□ -1.45
CIITA-208ENST00000572665 CIRBP-AS1Q8TBR5 109 aa6.01□□□□□ -1.45
CIITA-208ENST00000572665 DNAJC30Q96LL9 226 aa6.01□□□□□ -1.45
CIITA-208ENST00000572665 GNG13Q9P2W3 67 aa6.01□□□□□ -1.45
CIITA-208ENST00000572665 SRRM2Q9UQ35 2752 aaKnown RBP6.01□□□□□ -1.45
CIITA-208ENST00000572665 XKRY2A2RUG3 117 aa6□□□□□ -1.45
CIITA-208ENST00000572665 BCL2P10415 239 aa6□□□□□ -1.45
CIITA-208ENST00000572665 TAGLN2P37802 199 aaKnown RBP6□□□□□ -1.45
CIITA-208ENST00000572665 RPS20P60866 119 aaKnown RBP6□□□□□ -1.45
CIITA-208ENST00000572665 MEF2BQ02080 365 aaPredicted RBP6□□□□□ -1.45
CIITA-208ENST00000572665 ENHOQ6UWT2 76 aa6□□□□□ -1.45
CIITA-208ENST00000572665 OR10AG1Q8NH19 301 aa6□□□□□ -1.45
CIITA-208ENST00000572665 C11orf52Q96A22 123 aa6□□□□□ -1.45
CIITA-208ENST00000572665 DERL1Q9BUN8 251 aa6□□□□□ -1.45
CIITA-208ENST00000572665 VAX2Q9UIW0 290 aa6□□□□□ -1.45
CIITA-208ENST00000572665 IGHV1-24A0A0C4DH33 117 aa5.99□□□□□ -1.45
CIITA-208ENST00000572665 IFNA1P01562 189 aa5.99□□□□□ -1.45
CIITA-208ENST00000572665 RPL19P84098 196 aaKnown RBP5.99□□□□□ -1.45
CIITA-208ENST00000572665 LITAFQ99732 161 aa5.99□□□□□ -1.45
CIITA-208ENST00000572665 TRAV8-4A0A0B4J246 113 aa5.98□□□□□ -1.45
CIITA-208ENST00000572665 PDE6DO43924 150 aa5.98□□□□□ -1.45
CIITA-208ENST00000572665 P01737 135 aa5.98□□□□□ -1.45
CIITA-208ENST00000572665 GZMBP10144 247 aa5.98□□□□□ -1.45
CIITA-208ENST00000572665 RPL37AP61513 92 aaKnown RBP5.98□□□□□ -1.45
CIITA-208ENST00000572665 CACNG7P62955 275 aa5.98□□□□□ -1.45
CIITA-208ENST00000572665 SMIM12Q96EX1 92 aa5.98□□□□□ -1.45
CIITA-208ENST00000572665 BIN3Q9NQY0 253 aa5.98□□□□□ -1.45
CIITA-208ENST00000572665 PRR34Q9NV39 138 aa5.98□□□□□ -1.45
CIITA-208ENST00000572665 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.97□□□□□ -1.45
CIITA-208ENST00000572665 F2Z2F3 143 aa5.97□□□□□ -1.45
CIITA-208ENST00000572665 UBE2L6O14933 153 aa5.97□□□□□ -1.45
CIITA-208ENST00000572665 NDUFS6O75380 124 aaKnown RBP5.97□□□□□ -1.45
CIITA-208ENST00000572665 MGPP08493 103 aa5.97□□□□□ -1.45
CIITA-208ENST00000572665 TRGC1P0CF51 173 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms