RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 ATP5G1P05496 136 aa12.29□□□□□ -0.44
LITAF-209ENST00000571688 LINC00526Q96FQ7 95 aa12.29□□□□□ -0.44
LITAF-209ENST00000571688 K7EMT4 169 aa12.28□□□□□ -0.44
LITAF-209ENST00000571688 NDUFA1O15239 70 aa12.28□□□□□ -0.44
LITAF-209ENST00000571688 IGKV3-20P01619 116 aa12.28□□□□□ -0.44
LITAF-209ENST00000571688 PF4V1P10720 104 aa12.28□□□□□ -0.44
LITAF-209ENST00000571688 LMO4P61968 165 aa12.28□□□□□ -0.44
LITAF-209ENST00000571688 UBE2D4Q9Y2X8 147 aa12.28□□□□□ -0.44
LITAF-209ENST00000571688 IGHG2P01859 326 aa12.27□□□□□ -0.44
LITAF-209ENST00000571688 GVINP1Q7Z2Y8 2422 aa12.27□□□□□ -0.45
LITAF-209ENST00000571688 CHCHD7Q9BUK0 85 aa12.27□□□□□ -0.45
LITAF-209ENST00000571688 CCL21O00585 134 aa12.26□□□□□ -0.45
LITAF-209ENST00000571688 SPINK13Q1W4C9 94 aa12.26□□□□□ -0.45
LITAF-209ENST00000571688 C5orf38Q86SI9 138 aa12.26□□□□□ -0.45
LITAF-209ENST00000571688 LINC00308Q8TCZ7 52 aa12.26□□□□□ -0.45
LITAF-209ENST00000571688 CXCL5P42830 114 aa12.26□□□□□ -0.45
LITAF-209ENST00000571688 DAZ2Q13117 558 aaKnown RBP12.26□□□□□ -0.45
LITAF-209ENST00000571688 BEAN1Q3B7T3 259 aa12.26□□□□□ -0.45
LITAF-209ENST00000571688 DAZ4Q86SG3 579 aaKnown RBP12.26□□□□□ -0.45
LITAF-209ENST00000571688 DAZ3Q9NR90 486 aaKnown RBP12.26□□□□□ -0.45
LITAF-209ENST00000571688 IGHV3OR16-10A0A075B7F0 116 aa12.25□□□□□ -0.45
LITAF-209ENST00000571688 HERVK_113P63121 156 aa12.25□□□□□ -0.45
LITAF-209ENST00000571688 PEMTQ9UBM1 199 aa12.25□□□□□ -0.45
LITAF-209ENST00000571688 PROK1P58294 105 aa12.25□□□□□ -0.45
LITAF-209ENST00000571688 CDKN2A-AS1Q9UH64 79 aa12.24□□□□□ -0.45
LITAF-209ENST00000571688 IGHV3-73A0A0B4J1V6 119 aa12.24□□□□□ -0.45
LITAF-209ENST00000571688 TRACP01848 142 aa12.24□□□□□ -0.45
LITAF-209ENST00000571688 CIRBPQ14011 172 aaKnown RBP12.24□□□□□ -0.45
LITAF-209ENST00000571688 C22orf24Q9Y442 160 aa12.24□□□□□ -0.45
LITAF-209ENST00000571688 CSDC2Q9Y534 153 aaKnown RBP12.24□□□□□ -0.45
LITAF-209ENST00000571688 IGLV5-45A0A087WSX0 123 aa12.24□□□□□ -0.45
LITAF-209ENST00000571688 SPTBN1Q01082 2364 aaKnown RBP12.23□□□□□ -0.45
LITAF-209ENST00000571688 IGLV1-40P01703 118 aa12.23□□□□□ -0.45
LITAF-209ENST00000571688 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.23□□□□□ -0.45
LITAF-209ENST00000571688 A0A1W2PPR1 153 aa12.23□□□□□ -0.45
LITAF-209ENST00000571688 IGKV2-29A2NJV5 120 aaPredicted RBP12.23□□□□□ -0.45
LITAF-209ENST00000571688 BPESC1Q9GZL8 116 aa12.23□□□□□ -0.45
LITAF-209ENST00000571688 UBTD1Q9HAC8 227 aa12.23□□□□□ -0.45
LITAF-209ENST00000571688 COX7CP15954 63 aa12.22□□□□□ -0.45
LITAF-209ENST00000571688 TIRAPP58753 221 aa12.22□□□□□ -0.45
LITAF-209ENST00000571688 ADORA2A-AS1P86434 159 aa12.22□□□□□ -0.45
LITAF-209ENST00000571688 Q8N2B8 174 aa12.22□□□□□ -0.45
LITAF-209ENST00000571688 SNRPD3P62318 126 aaKnown RBP12.22□□□□□ -0.45
LITAF-209ENST00000571688 LRRC75A-AS1Q8N1F1 130 aa12.22□□□□□ -0.45
LITAF-209ENST00000571688 RNF152Q8N8N0 203 aa12.22□□□□□ -0.45
LITAF-209ENST00000571688 NACAE9PAV3 2078 aa12.22□□□□□ -0.45
LITAF-209ENST00000571688 LOC107984640A0A0U1RRK4 108 aa12.21□□□□□ -0.45
LITAF-209ENST00000571688 A0A1B0GX51 115 aa12.21□□□□□ -0.45
LITAF-209ENST00000571688 BAALC-AS2P0C853 105 aa12.21□□□□□ -0.45
LITAF-209ENST00000571688 LY6EQ16553 131 aa12.21□□□□□ -0.45
LITAF-209ENST00000571688 BRD3OSQ6XYD6 125 aa12.21□□□□□ -0.45
LITAF-209ENST00000571688 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.21□□□□□ -0.45
LITAF-209ENST00000571688 C2orf48Q96LS8 159 aa12.21□□□□□ -0.45
LITAF-209ENST00000571688 LINC00467Q9BRT7 94 aa12.21□□□□□ -0.45
LITAF-209ENST00000571688 Q9UF83 564 aa12.21□□□□□ -0.45
LITAF-209ENST00000571688 KLK5Q9Y337 293 aaPredicted RBP12.21□□□□□ -0.45
LITAF-209ENST00000571688 K7EQG2 157 aa12.21□□□□□ -0.46
LITAF-209ENST00000571688 FAM222AQ5U5X8 452 aa12.21□□□□□ -0.46
LITAF-209ENST00000571688 SOSTDC1Q6X4U4 206 aa12.21□□□□□ -0.46
LITAF-209ENST00000571688 HIST1H4AP62805 103 aaKnown RBP12.2□□□□□ -0.46
LITAF-209ENST00000571688 Q9H8V8 135 aa12.2□□□□□ -0.46
LITAF-209ENST00000571688 DOPEY2Q9Y3R5 2298 aa12.2□□□□□ -0.46
LITAF-209ENST00000571688 IGLV5-39A0A0G2JS06 123 aa12.19□□□□□ -0.46
LITAF-209ENST00000571688 J3KT08 172 aa12.19□□□□□ -0.46
LITAF-209ENST00000571688 RBMY1A1P0DJD3 496 aaKnown RBP12.19□□□□□ -0.46
LITAF-209ENST00000571688 RBMY1CP0DJD4 496 aa12.19□□□□□ -0.46
LITAF-209ENST00000571688 CRYGAP11844 174 aa12.19□□□□□ -0.46
LITAF-209ENST00000571688 BLCAPP62952 87 aa12.19□□□□□ -0.46
LITAF-209ENST00000571688 RBMY1FQ15415 496 aaKnown RBP12.19□□□□□ -0.46
LITAF-209ENST00000571688 TLN1Q9Y490 2541 aaKnown RBP12.18□□□□□ -0.46
LITAF-209ENST00000571688 CFHR3Q02985 330 aa12.18□□□□□ -0.46
LITAF-209ENST00000571688 COPS9Q8WXC6 57 aa12.18□□□□□ -0.46
LITAF-209ENST00000571688 A6NDX4 124 aa12.18□□□□□ -0.46
LITAF-209ENST00000571688 INAFM2P0DMQ5 153 aa12.18□□□□□ -0.46
LITAF-209ENST00000571688 Q6ZSN1 163 aa12.18□□□□□ -0.46
LITAF-209ENST00000571688 FAM218AQ96MZ4 157 aa12.18□□□□□ -0.46
LITAF-209ENST00000571688 PRORYQ9H606 182 aa12.17□□□□□ -0.46
LITAF-209ENST00000571688 COX6A2Q02221 97 aa12.17□□□□□ -0.46
LITAF-209ENST00000571688 ZNF625Q96I27 306 aaPredicted RBP12.16□□□□□ -0.46
LITAF-209ENST00000571688 A0A0U1RRA0 63 aa12.16□□□□□ -0.46
LITAF-209ENST00000571688 KNCNA6PVL3 124 aa12.16□□□□□ -0.46
LITAF-209ENST00000571688 H3BUX3 64 aa12.16□□□□□ -0.46
LITAF-209ENST00000571688 ATOX1O00244 68 aa12.15□□□□□ -0.46
LITAF-209ENST00000571688 C5orf47Q569G3 176 aa12.15□□□□□ -0.46
LITAF-209ENST00000571688 ABCA2Q9BZC7 2435 aa12.15□□□□□ -0.46
LITAF-209ENST00000571688 GAGE2AQ6NT46 116 aa12.15□□□□□ -0.46
LITAF-209ENST00000571688 PTPRZ1P23471 2315 aaPredicted RBP12.14□□□□□ -0.47
LITAF-209ENST00000571688 FAM19A5Q7Z5A7 132 aaPredicted RBP12.14□□□□□ -0.47
LITAF-209ENST00000571688 ZNF292O60281 2723 aa12.14□□□□□ -0.47
LITAF-209ENST00000571688 CELSR1Q9NYQ6 3014 aa12.14□□□□□ -0.47
LITAF-209ENST00000571688 IGHV3OR16-12A0A075B7B8 117 aa12.14□□□□□ -0.47
LITAF-209ENST00000571688 COL6A6A6NMZ7 2263 aa12.14□□□□□ -0.47
LITAF-209ENST00000571688 IGHV3-38A0A0C4DH36 116 aa12.13□□□□□ -0.47
LITAF-209ENST00000571688 RPS28P62857 69 aaKnown RBP12.13□□□□□ -0.47
LITAF-209ENST00000571688 SMIM9A6NGZ8 99 aa12.13□□□□□ -0.47
LITAF-209ENST00000571688 HTN1P15515 57 aa12.13□□□□□ -0.47
LITAF-209ENST00000571688 PIK3CD-AS1Q5SR53 167 aa12.13□□□□□ -0.47
LITAF-209ENST00000571688 LINC00242Q5T6M2 205 aa12.13□□□□□ -0.47
LITAF-209ENST00000571688 SMIM1B2RUZ4 78 aa12.12□□□□□ -0.47
LITAF-209ENST00000571688 IGHV4-38-2P0DP08 117 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms