RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 RPS10P46783 165 aaKnown RBP9.03□□□□□ -0.96
CCDC40-205ENST00000571028 DAZ4Q86SG3 579 aaKnown RBP9.03□□□□□ -0.96
CCDC40-205ENST00000571028 DAZ3Q9NR90 486 aaKnown RBP9.03□□□□□ -0.96
CCDC40-205ENST00000571028 EREGO14944 169 aa9.02□□□□□ -0.97
CCDC40-205ENST00000571028 ATRAIDQ6UW56 229 aa9.02□□□□□ -0.97
CCDC40-205ENST00000571028 CHCHD5Q9BSY4 110 aa9.02□□□□□ -0.97
CCDC40-205ENST00000571028 ST20Q9HBF5 79 aa9.02□□□□□ -0.97
CCDC40-205ENST00000571028 TRBV6-8A0A0A6YYG3 113 aa9.01□□□□□ -0.97
CCDC40-205ENST00000571028 SDHAF1A6NFY7 115 aa9.01□□□□□ -0.97
CCDC40-205ENST00000571028 D6R8Y8 96 aa9.01□□□□□ -0.97
CCDC40-205ENST00000571028 TMEM262E9PQX1 116 aa9.01□□□□□ -0.97
CCDC40-205ENST00000571028 PMCHP20382 165 aa9.01□□□□□ -0.97
CCDC40-205ENST00000571028 NTM-AS1Q6ZSK4 140 aa9.01□□□□□ -0.97
CCDC40-205ENST00000571028 Q8N3U1 123 aa9.01□□□□□ -0.97
CCDC40-205ENST00000571028 TMEM242Q9NWH2 141 aa9.01□□□□□ -0.97
CCDC40-205ENST00000571028 COTL1Q14019 142 aa9□□□□□ -0.97
CCDC40-205ENST00000571028 KRTAP1-5Q9BYS1 174 aa9□□□□□ -0.97
CCDC40-205ENST00000571028 PGPEP1Q9NXJ5 209 aa9□□□□□ -0.97
CCDC40-205ENST00000571028 TRBV25-1A0A075B6N4 114 aa8.99□□□□□ -0.97
CCDC40-205ENST00000571028 TRAV9-2A0A087WT02 112 aa8.99□□□□□ -0.97
CCDC40-205ENST00000571028 TGIF2-C20orf24A0A0A6YYL0 155 aa8.99□□□□□ -0.97
CCDC40-205ENST00000571028 IGHV1-24A0A0C4DH33 117 aa8.99□□□□□ -0.97
CCDC40-205ENST00000571028 AMTP48728 403 aa8.99□□□□□ -0.97
CCDC40-205ENST00000571028 GAGE6Q13070 117 aa8.99□□□□□ -0.97
CCDC40-205ENST00000571028 TMEM97Q5BJF2 176 aa8.99□□□□□ -0.97
CCDC40-205ENST00000571028 TMEM136Q6ZRR5 245 aa8.99□□□□□ -0.97
CCDC40-205ENST00000571028 NRACQ8N912 160 aa8.99□□□□□ -0.97
CCDC40-205ENST00000571028 MYCBP2O75592 4640 aa8.99□□□□□ -0.97
CCDC40-205ENST00000571028 TRAV9-1A0A075B6T8 112 aa8.98□□□□□ -0.97
CCDC40-205ENST00000571028 FAM229AH3BQW9 127 aa8.98□□□□□ -0.97
CCDC40-205ENST00000571028 TNFRSF6BO95407 300 aa8.98□□□□□ -0.97
CCDC40-205ENST00000571028 NPYP01303 97 aa8.98□□□□□ -0.97
CCDC40-205ENST00000571028 DNAH10OSP0CZ25 163 aa8.98□□□□□ -0.97
CCDC40-205ENST00000571028 KIAA1644Q3SXP7 199 aa8.98□□□□□ -0.97
CCDC40-205ENST00000571028 TMEM70Q9BUB7 260 aa8.98□□□□□ -0.97
CCDC40-205ENST00000571028 A0A087WX48 190 aa8.97□□□□□ -0.97
CCDC40-205ENST00000571028 TRBV6-5A0A0K0K1A5 114 aa8.97□□□□□ -0.97
CCDC40-205ENST00000571028 I3L3M4 83 aa8.97□□□□□ -0.97
CCDC40-205ENST00000571028 PPP1R17O96001 155 aa8.97□□□□□ -0.97
CCDC40-205ENST00000571028 XGP55808 180 aa8.97□□□□□ -0.97
CCDC40-205ENST00000571028 SUMO2P61956 95 aaKnown RBP8.97□□□□□ -0.97
CCDC40-205ENST00000571028 LINC01556Q5JQF7 62 aa8.97□□□□□ -0.97
CCDC40-205ENST00000571028 CDPF1Q6NVV7 123 aa8.97□□□□□ -0.97
CCDC40-205ENST00000571028 NIT1Q86X76 327 aa8.97□□□□□ -0.97
CCDC40-205ENST00000571028 CBLN2Q8IUK8 224 aa8.97□□□□□ -0.97
CCDC40-205ENST00000571028 ORMDL3Q8N138 153 aa8.97□□□□□ -0.97
CCDC40-205ENST00000571028 PRELID3AQ96N28 172 aa8.97□□□□□ -0.97
CCDC40-205ENST00000571028 TMEM243Q9BU79 118 aa8.97□□□□□ -0.97
CCDC40-205ENST00000571028 APCSP02743 223 aa8.96□□□□□ -0.98
CCDC40-205ENST00000571028 PPBPP02775 128 aa8.96□□□□□ -0.98
CCDC40-205ENST00000571028 FCER1GP30273 86 aa8.96□□□□□ -0.98
CCDC40-205ENST00000571028 ELOBQ15370 118 aa8.96□□□□□ -0.98
CCDC40-205ENST00000571028 Q9HAA7 133 aa8.96□□□□□ -0.98
CCDC40-205ENST00000571028 SRRM2Q9UQ35 2752 aaKnown RBP8.95□□□□□ -0.98
CCDC40-205ENST00000571028 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.95□□□□□ -0.98
CCDC40-205ENST00000571028 LOC389332A0A1B0GUA5 103 aa8.95□□□□□ -0.98
CCDC40-205ENST00000571028 IGKV2-29A2NJV5 120 aaPredicted RBP8.95□□□□□ -0.98
CCDC40-205ENST00000571028 VCYO14598 125 aa8.95□□□□□ -0.98
CCDC40-205ENST00000571028 UBE2L6O14933 153 aa8.95□□□□□ -0.98
CCDC40-205ENST00000571028 HLA-DQA1P01909 254 aa8.95□□□□□ -0.98
CCDC40-205ENST00000571028 SMR3BP02814 79 aaPredicted RBP8.95□□□□□ -0.98
CCDC40-205ENST00000571028 POLR2KP53803 58 aaKnown RBP8.95□□□□□ -0.98
CCDC40-205ENST00000571028 IQCJQ1A5X6 159 aa8.95□□□□□ -0.98
CCDC40-205ENST00000571028 MPV17L2Q567V2 206 aa8.95□□□□□ -0.98
CCDC40-205ENST00000571028 Q8N976 141 aa8.95□□□□□ -0.98
CCDC40-205ENST00000571028 KLK12Q9UKR0 248 aa8.95□□□□□ -0.98
CCDC40-205ENST00000571028 TSHBP01222 138 aa8.94□□□□□ -0.98
CCDC40-205ENST00000571028 ANGP03950 147 aaKnown RBP8.94□□□□□ -0.98
CCDC40-205ENST00000571028 FUSP35637 526 aaKnown RBP eCLIP8.94□□□□□ -0.98
CCDC40-205ENST00000571028 FABP9Q0Z7S8 132 aa8.94□□□□□ -0.98
CCDC40-205ENST00000571028 C10orf126Q8N4M7 172 aa8.94□□□□□ -0.98
CCDC40-205ENST00000571028 C20orf78Q9BR46 151 aa8.94□□□□□ -0.98
CCDC40-205ENST00000571028 GNB1LQ9BYB4 327 aa8.94□□□□□ -0.98
CCDC40-205ENST00000571028 MRPL18Q9H0U6 180 aaKnown RBP8.94□□□□□ -0.98
CCDC40-205ENST00000571028 SMCO4Q9NRQ5 59 aa8.94□□□□□ -0.98
CCDC40-205ENST00000571028 RBX1P62877 108 aa8.93□□□□□ -0.98
CCDC40-205ENST00000571028 KIR2DL4Q99706 377 aa8.93□□□□□ -0.98
CCDC40-205ENST00000571028 SMIM2Q9BVW6 85 aa8.93□□□□□ -0.98
CCDC40-205ENST00000571028 TRAPPC1Q9Y5R8 145 aa8.93□□□□□ -0.98
CCDC40-205ENST00000571028 FAT1Q14517 4588 aa8.92□□□□□ -0.98
CCDC40-205ENST00000571028 FLG2Q5D862 2391 aaPredicted RBP8.92□□□□□ -0.98
CCDC40-205ENST00000571028 TRBV24-1A0A075B6N3 115 aa8.92□□□□□ -0.98
CCDC40-205ENST00000571028 TRBV27A0A0K0K1C4 114 aa8.92□□□□□ -0.98
CCDC40-205ENST00000571028 TCAPO15273 167 aa8.92□□□□□ -0.98
CCDC40-205ENST00000571028 COX19Q49B96 90 aa8.92□□□□□ -0.98
CCDC40-205ENST00000571028 AMMECR1LQ6DCA0 310 aa8.92□□□□□ -0.98
CCDC40-205ENST00000571028 RNASEKQ6P5S7 137 aaKnown RBP8.92□□□□□ -0.98
CCDC40-205ENST00000571028 CLPSL2Q6UWE3 100 aa8.92□□□□□ -0.98
CCDC40-205ENST00000571028 UBE2WQ96B02 151 aa8.92□□□□□ -0.98
CCDC40-205ENST00000571028 CHCHD7Q9BUK0 85 aa8.92□□□□□ -0.98
CCDC40-205ENST00000571028 MAP1LC3AQ9H492 121 aa8.92□□□□□ -0.98
CCDC40-205ENST00000571028 IBA57-AS1B1ANH7 110 aa8.91□□□□□ -0.98
CCDC40-205ENST00000571028 PHOX2AO14813 284 aa8.91□□□□□ -0.98
CCDC40-205ENST00000571028 PKIAP61925 76 aa8.91□□□□□ -0.98
CCDC40-205ENST00000571028 UBR4Q5T4S7 5183 aa8.91□□□□□ -0.98
CCDC40-205ENST00000571028 IGLV4-60A0A075B6I1 120 aa8.9□□□□□ -0.98
CCDC40-205ENST00000571028 SCO1O75880 301 aa8.9□□□□□ -0.98
CCDC40-205ENST00000571028 MT-ND6P03923 174 aa8.9□□□□□ -0.98
CCDC40-205ENST00000571028 RAB5AP20339 215 aa8.9□□□□□ -0.98
CCDC40-205ENST00000571028 LAMTOR2Q9Y2Q5 125 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms