RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 ZNF56Q15929 161 aa3.89□□□□□ -1.79
SF3B3-213ENST00000569687 TAL2Q16559 108 aa3.89□□□□□ -1.79
SF3B3-213ENST00000569687 FAM74A4Q5TZK3 123 aa3.89□□□□□ -1.79
SF3B3-213ENST00000569687 NEGR1Q7Z3B1 354 aa3.89□□□□□ -1.79
SF3B3-213ENST00000569687 GTSCR1Q86UQ5 136 aa3.89□□□□□ -1.79
SF3B3-213ENST00000569687 NFE4Q86UQ8 179 aa3.89□□□□□ -1.79
SF3B3-213ENST00000569687 MAPKAPK5-AS1Q8N8E1 139 aa3.89□□□□□ -1.79
SF3B3-213ENST00000569687 IL17DQ8TAD2 202 aa3.89□□□□□ -1.79
SF3B3-213ENST00000569687 TM2D2Q9BX73 214 aa3.89□□□□□ -1.79
SF3B3-213ENST00000569687 XCL2Q9UBD3 114 aa3.89□□□□□ -1.79
SF3B3-213ENST00000569687 TP53TG1Q9Y2A0 90 aa3.89□□□□□ -1.79
SF3B3-213ENST00000569687 SONP18583 2426 aaKnown RBP3.89□□□□□ -1.79
SF3B3-213ENST00000569687 HIVEP2P31629 2446 aa3.89□□□□□ -1.79
SF3B3-213ENST00000569687 AGRNO00468 2067 aa3.88□□□□□ -1.79
SF3B3-213ENST00000569687 IGLV4-69A0A075B6H9 119 aa3.88□□□□□ -1.79
SF3B3-213ENST00000569687 TRBV25-1A0A075B6N4 114 aa3.88□□□□□ -1.79
SF3B3-213ENST00000569687 A6NDN8 102 aa3.88□□□□□ -1.79
SF3B3-213ENST00000569687 H3BRM9 83 aa3.88□□□□□ -1.79
SF3B3-213ENST00000569687 PRM2P04554 102 aa3.88□□□□□ -1.79
SF3B3-213ENST00000569687 AZU1P20160 251 aa3.88□□□□□ -1.79
SF3B3-213ENST00000569687 KRTAP10-3P60369 221 aa3.88□□□□□ -1.79
SF3B3-213ENST00000569687 HIST2H2BDQ6DRA6 164 aa3.88□□□□□ -1.79
SF3B3-213ENST00000569687 Q6ZSN1 163 aa3.88□□□□□ -1.79
SF3B3-213ENST00000569687 CSNK1G2-AS1Q8NCQ2 148 aa3.88□□□□□ -1.79
SF3B3-213ENST00000569687 RNASE8Q8TDE3 154 aaKnown RBP3.88□□□□□ -1.79
SF3B3-213ENST00000569687 AMELXQ99217 191 aa3.88□□□□□ -1.79
SF3B3-213ENST00000569687 OVOL2Q9BRP0 275 aa3.88□□□□□ -1.79
SF3B3-213ENST00000569687 C1QTNF4Q9BXJ3 329 aa3.88□□□□□ -1.79
SF3B3-213ENST00000569687 TP73-AS1Q9UF72 201 aa3.88□□□□□ -1.79
SF3B3-213ENST00000569687 TNFRSF18Q9Y5U5 241 aa3.88□□□□□ -1.79
SF3B3-213ENST00000569687 FLNBO75369 2602 aaKnown RBP3.88□□□□□ -1.79
SF3B3-213ENST00000569687 NSD1Q96L73 2696 aaPredicted RBP3.88□□□□□ -1.79
SF3B3-213ENST00000569687 TRBV10-1A0A0K0K1A3 114 aa3.87□□□□□ -1.79
SF3B3-213ENST00000569687 MYMXA0A1B0GTQ4 84 aa3.87□□□□□ -1.79
SF3B3-213ENST00000569687 C11orf86A6NJI1 115 aa3.87□□□□□ -1.79
SF3B3-213ENST00000569687 SAP30O75446 220 aa3.87□□□□□ -1.79
SF3B3-213ENST00000569687 HTN1P15515 57 aa3.87□□□□□ -1.79
SF3B3-213ENST00000569687 INSL3P51460 131 aa3.87□□□□□ -1.79
SF3B3-213ENST00000569687 RPL39P62891 51 aaKnown RBP3.87□□□□□ -1.79
SF3B3-213ENST00000569687 UBE2V1Q13404 147 aa3.87□□□□□ -1.79
SF3B3-213ENST00000569687 OR11H2Q8NH07 326 aa3.87□□□□□ -1.79
SF3B3-213ENST00000569687 TMEM263Q8WUH6 116 aaKnown RBP3.87□□□□□ -1.79
SF3B3-213ENST00000569687 FAM104AQ969W3 186 aa3.87□□□□□ -1.79
SF3B3-213ENST00000569687 TIMM21Q9BVV7 248 aa3.87□□□□□ -1.79
SF3B3-213ENST00000569687 VCX2Q9H322 139 aa3.87□□□□□ -1.79
SF3B3-213ENST00000569687 SETXQ7Z333 2677 aaKnown RBP3.87□□□□□ -1.79
SF3B3-213ENST00000569687 IGLV4-3A0A075B6K6 122 aa3.86□□□□□ -1.79
SF3B3-213ENST00000569687 TRAV4A0A0B4J268 109 aa3.86□□□□□ -1.79
SF3B3-213ENST00000569687 SMIM13P0DJ93 91 aa3.86□□□□□ -1.79
SF3B3-213ENST00000569687 HERVK_113P61574 105 aa3.86□□□□□ -1.79
SF3B3-213ENST00000569687 MRPS36P82909 103 aaKnown RBP3.86□□□□□ -1.79
SF3B3-213ENST00000569687 CEND1Q8N111 149 aa3.86□□□□□ -1.79
SF3B3-213ENST00000569687 OR4C5Q8NGB2 326 aa3.86□□□□□ -1.79
SF3B3-213ENST00000569687 ZNRF2Q8NHG8 242 aa3.86□□□□□ -1.79
SF3B3-213ENST00000569687 PRADC1Q9BSG0 188 aa3.86□□□□□ -1.79
SF3B3-213ENST00000569687 CHCHD7Q9BUK0 85 aa3.86□□□□□ -1.79
SF3B3-213ENST00000569687 CHAC1Q9BUX1 264 aa3.86□□□□□ -1.79
SF3B3-213ENST00000569687 SPANXA1Q9NS26 97 aa3.86□□□□□ -1.79
SF3B3-213ENST00000569687 MRPL16Q9NX20 251 aaKnown RBP3.86□□□□□ -1.79
SF3B3-213ENST00000569687 Q9UF83 564 aa3.86□□□□□ -1.79
SF3B3-213ENST00000569687 CMYA5Q8N3K9 4069 aa3.86□□□□□ -1.79
SF3B3-213ENST00000569687 ANK2Q01484 3957 aa3.86□□□□□ -1.79
SF3B3-213ENST00000569687 FN1P02751 2386 aaKnown RBP3.85□□□□□ -1.79
SF3B3-213ENST00000569687 NIPBLQ6KC79 2804 aaeCLIP3.85□□□□□ -1.79
SF3B3-213ENST00000569687 TRBV7-3A0A075B6L6 115 aa3.85□□□□□ -1.79
SF3B3-213ENST00000569687 IGHV3-73A0A0B4J1V6 119 aa3.85□□□□□ -1.79
SF3B3-213ENST00000569687 TRAV8-6A0A0B4J262 113 aa3.85□□□□□ -1.79
SF3B3-213ENST00000569687 A0A1B0GWB2 263 aa3.85□□□□□ -1.79
SF3B3-213ENST00000569687 PLAC8L1A1L4L8 177 aa3.85□□□□□ -1.79
SF3B3-213ENST00000569687 CCL25O15444 150 aa3.85□□□□□ -1.79
SF3B3-213ENST00000569687 Q6ZVH6 145 aa3.85□□□□□ -1.79
SF3B3-213ENST00000569687 WFDC9Q8NEX5 89 aa3.85□□□□□ -1.79
SF3B3-213ENST00000569687 C16orf74Q96GX8 76 aa3.85□□□□□ -1.79
SF3B3-213ENST00000569687 TTTY13Q9BZ97 58 aa3.85□□□□□ -1.79
SF3B3-213ENST00000569687 CSDC2Q9Y534 153 aaKnown RBP3.85□□□□□ -1.79
SF3B3-213ENST00000569687 MTORP42345 2549 aa3.84□□□□□ -1.79
SF3B3-213ENST00000569687 TRGV1A0A0A0MS02 117 aa3.84□□□□□ -1.79
SF3B3-213ENST00000569687 TRBV6-4A0A1B0GX49 114 aa3.84□□□□□ -1.79
SF3B3-213ENST00000569687 TMEM223A0PJW6 202 aa3.84□□□□□ -1.79
SF3B3-213ENST00000569687 SMIM9A6NGZ8 99 aa3.84□□□□□ -1.79
SF3B3-213ENST00000569687 LEPROTO15243 131 aa3.84□□□□□ -1.79
SF3B3-213ENST00000569687 TCTAP57738 103 aa3.84□□□□□ -1.79
SF3B3-213ENST00000569687 UBE2D3P61077 147 aa3.84□□□□□ -1.79
SF3B3-213ENST00000569687 UBE2D2P62837 147 aa3.84□□□□□ -1.79
SF3B3-213ENST00000569687 SMAGPQ0VAQ4 97 aa3.84□□□□□ -1.79
SF3B3-213ENST00000569687 COTL1Q14019 142 aa3.84□□□□□ -1.79
SF3B3-213ENST00000569687 VAMP3Q15836 100 aa3.84□□□□□ -1.79
SF3B3-213ENST00000569687 RRN3P1Q2M238 152 aa3.84□□□□□ -1.79
SF3B3-213ENST00000569687 C9orf66Q5T8R8 295 aa3.84□□□□□ -1.79
SF3B3-213ENST00000569687 Q6ZTI0 123 aa3.84□□□□□ -1.79
SF3B3-213ENST00000569687 FAM19A3Q7Z5A8 133 aa3.84□□□□□ -1.79
SF3B3-213ENST00000569687 DAZ4Q86SG3 579 aaKnown RBP3.84□□□□□ -1.79
SF3B3-213ENST00000569687 LINC00612Q8N6U2 182 aa3.84□□□□□ -1.79
SF3B3-213ENST00000569687 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.84□□□□□ -1.79
SF3B3-213ENST00000569687 SLC25A29Q8N8R3 303 aa3.84□□□□□ -1.79
SF3B3-213ENST00000569687 OR5A1Q8NGJ0 315 aa3.84□□□□□ -1.79
SF3B3-213ENST00000569687 KIR2DL5BQ8NHK3 375 aa3.84□□□□□ -1.79
SF3B3-213ENST00000569687 PHLDA1Q8WV24 401 aaPredicted RBP3.84□□□□□ -1.79
SF3B3-213ENST00000569687 ZNF479Q96JC4 524 aa3.84□□□□□ -1.79
SF3B3-213ENST00000569687 OPRPNQ99935 248 aaPredicted RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms