RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 KRTAP10-2P60368 255 aa6.55□□□□□ -1.36
CLN6-209ENST00000569336 ATRAIDQ6UW56 229 aa6.55□□□□□ -1.36
CLN6-209ENST00000569336 RPL39LQ96EH5 51 aaKnown RBP6.55□□□□□ -1.36
CLN6-209ENST00000569336 LRP1BQ9NZR2 4599 aa6.54□□□□□ -1.36
CLN6-209ENST00000569336 TRBV6-5A0A0K0K1A5 114 aa6.54□□□□□ -1.36
CLN6-209ENST00000569336 LRCOL1A6NCL2 159 aa6.54□□□□□ -1.36
CLN6-209ENST00000569336 SDHAF1A6NFY7 115 aa6.54□□□□□ -1.36
CLN6-209ENST00000569336 MT-ND4LP03901 98 aa6.54□□□□□ -1.36
CLN6-209ENST00000569336 RBX1P62877 108 aa6.54□□□□□ -1.36
CLN6-209ENST00000569336 GAGE6Q13070 117 aa6.54□□□□□ -1.36
CLN6-209ENST00000569336 UQCC3Q6UW78 93 aa6.54□□□□□ -1.36
CLN6-209ENST00000569336 Q8N814 137 aa6.54□□□□□ -1.36
CLN6-209ENST00000569336 Q8N976 141 aa6.54□□□□□ -1.36
CLN6-209ENST00000569336 ST20Q9HBF5 79 aa6.54□□□□□ -1.36
CLN6-209ENST00000569336 IGLV5-52A0A0A0MRZ9 124 aa6.53□□□□□ -1.36
CLN6-209ENST00000569336 A0A1B0GUV1 79 aa6.53□□□□□ -1.36
CLN6-209ENST00000569336 F8W036 122 aa6.53□□□□□ -1.36
CLN6-209ENST00000569336 I3L3M4 83 aa6.53□□□□□ -1.36
CLN6-209ENST00000569336 RAB4AP20338 218 aa6.53□□□□□ -1.36
CLN6-209ENST00000569336 HBBP68871 147 aa6.53□□□□□ -1.36
CLN6-209ENST00000569336 ATP5L2Q7Z4Y8 100 aa6.53□□□□□ -1.36
CLN6-209ENST00000569336 AMN1Q8IY45 258 aa6.53□□□□□ -1.36
CLN6-209ENST00000569336 PRR34Q9NV39 138 aa6.53□□□□□ -1.36
CLN6-209ENST00000569336 H7C423 109 aa6.52□□□□□ -1.37
CLN6-209ENST00000569336 PMCHP20382 165 aa6.52□□□□□ -1.37
CLN6-209ENST00000569336 CAMPP49913 170 aa6.52□□□□□ -1.37
CLN6-209ENST00000569336 C14orf177Q52M58 125 aa6.52□□□□□ -1.37
CLN6-209ENST00000569336 AMMECR1LQ6DCA0 310 aa6.52□□□□□ -1.37
CLN6-209ENST00000569336 ANAPC16Q96DE5 110 aa6.52□□□□□ -1.37
CLN6-209ENST00000569336 RNF185Q96GF1 192 aa6.52□□□□□ -1.37
CLN6-209ENST00000569336 TMEM70Q9BUB7 260 aa6.52□□□□□ -1.37
CLN6-209ENST00000569336 APOBP04114 4563 aaKnown RBP6.52□□□□□ -1.37
CLN6-209ENST00000569336 HSPG2P98160 4391 aa6.51□□□□□ -1.37
CLN6-209ENST00000569336 TRAV8-4A0A0B4J246 113 aa6.51□□□□□ -1.37
CLN6-209ENST00000569336 TRBV27A0A0K0K1C4 114 aa6.51□□□□□ -1.37
CLN6-209ENST00000569336 LINC00862A6NCI5 91 aa6.51□□□□□ -1.37
CLN6-209ENST00000569336 ZNF25P17030 456 aaPredicted RBP6.51□□□□□ -1.37
CLN6-209ENST00000569336 IFITM2Q01629 132 aa6.51□□□□□ -1.37
CLN6-209ENST00000569336 REG3AQ06141 175 aa6.51□□□□□ -1.37
CLN6-209ENST00000569336 FAM104BQ5XKR9 115 aa6.51□□□□□ -1.37
CLN6-209ENST00000569336 MRPL54Q6P161 138 aaKnown RBP6.51□□□□□ -1.37
CLN6-209ENST00000569336 CLPSL2Q6UWE3 100 aa6.51□□□□□ -1.37
CLN6-209ENST00000569336 ENHOQ6UWT2 76 aa6.51□□□□□ -1.37
CLN6-209ENST00000569336 LINC00269Q8N2A0 174 aa6.51□□□□□ -1.37
CLN6-209ENST00000569336 A0A1B0GXF2 115 aa6.5□□□□□ -1.37
CLN6-209ENST00000569336 TCAPO15273 167 aa6.5□□□□□ -1.37
CLN6-209ENST00000569336 HLA-DQA1P01909 254 aa6.5□□□□□ -1.37
CLN6-209ENST00000569336 GCSHP23434 173 aa6.5□□□□□ -1.37
CLN6-209ENST00000569336 CKS2P33552 79 aa6.5□□□□□ -1.37
CLN6-209ENST00000569336 SUMO2P61956 95 aaKnown RBP6.5□□□□□ -1.37
CLN6-209ENST00000569336 SMAGPQ0VAQ4 97 aa6.5□□□□□ -1.37
CLN6-209ENST00000569336 BTF3L4Q96K17 158 aa6.5□□□□□ -1.37
CLN6-209ENST00000569336 KIR2DL4Q99706 377 aa6.5□□□□□ -1.37
CLN6-209ENST00000569336 C7orf77A4D0Y5 90 aa6.49□□□□□ -1.37
CLN6-209ENST00000569336 VCYO14598 125 aa6.49□□□□□ -1.37
CLN6-209ENST00000569336 LECT2O14960 151 aa6.49□□□□□ -1.37
CLN6-209ENST00000569336 TSHBP01222 138 aa6.49□□□□□ -1.37
CLN6-209ENST00000569336 PPBPP02775 128 aa6.49□□□□□ -1.37
CLN6-209ENST00000569336 FCER1GP30273 86 aa6.49□□□□□ -1.37
CLN6-209ENST00000569336 RPS10P46783 165 aaKnown RBP6.49□□□□□ -1.37
CLN6-209ENST00000569336 POLR2KP53803 58 aaKnown RBP6.49□□□□□ -1.37
CLN6-209ENST00000569336 MRPL51Q4U2R6 128 aaKnown RBP6.49□□□□□ -1.37
CLN6-209ENST00000569336 RNASEKQ6P5S7 137 aaKnown RBP6.49□□□□□ -1.37
CLN6-209ENST00000569336 C20orf203Q8NBC4 194 aa6.49□□□□□ -1.37
CLN6-209ENST00000569336 DEFB104AQ8WTQ1 72 aa6.49□□□□□ -1.37
CLN6-209ENST00000569336 BAALCQ8WXS3 180 aa6.49□□□□□ -1.37
CLN6-209ENST00000569336 TMEM101Q96IK0 257 aa6.49□□□□□ -1.37
CLN6-209ENST00000569336 TMEM242Q9NWH2 141 aa6.49□□□□□ -1.37
CLN6-209ENST00000569336 IGLV4-60A0A075B6I1 120 aa6.48□□□□□ -1.37
CLN6-209ENST00000569336 TMEM218A2RU14 115 aa6.48□□□□□ -1.37
CLN6-209ENST00000569336 SMKR1H3BMG3 65 aa6.48□□□□□ -1.37
CLN6-209ENST00000569336 PHOX2AO14813 284 aa6.48□□□□□ -1.37
CLN6-209ENST00000569336 FGF6P10767 208 aa6.48□□□□□ -1.37
CLN6-209ENST00000569336 WFDC2Q14508 124 aa6.48□□□□□ -1.37
CLN6-209ENST00000569336 COMMD7Q86VX2 200 aa6.48□□□□□ -1.37
CLN6-209ENST00000569336 MAPKAPK5-AS1Q8N8E1 139 aa6.48□□□□□ -1.37
CLN6-209ENST00000569336 NRACQ8N912 160 aa6.48□□□□□ -1.37
CLN6-209ENST00000569336 C20orf78Q9BR46 151 aa6.48□□□□□ -1.37
CLN6-209ENST00000569336 SEC11CQ9BY50 192 aa6.48□□□□□ -1.37
CLN6-209ENST00000569336 HERC1Q15751 4861 aa6.47□□□□□ -1.37
CLN6-209ENST00000569336 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.47□□□□□ -1.37
CLN6-209ENST00000569336 TRBV24-1A0A075B6N3 115 aa6.47□□□□□ -1.37
CLN6-209ENST00000569336 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.47□□□□□ -1.37
CLN6-209ENST00000569336 IGKV2-29A2NJV5 120 aaPredicted RBP6.47□□□□□ -1.37
CLN6-209ENST00000569336 D6R8Y8 96 aa6.47□□□□□ -1.37
CLN6-209ENST00000569336 GAS8-AS1O95177 125 aa6.47□□□□□ -1.37
CLN6-209ENST00000569336 ADCYAP1P18509 176 aa6.47□□□□□ -1.37
CLN6-209ENST00000569336 FUSP35637 526 aaKnown RBP eCLIP6.47□□□□□ -1.37
CLN6-209ENST00000569336 RPL32P62910 135 aaKnown RBP6.47□□□□□ -1.37
CLN6-209ENST00000569336 ORMDL3Q8N138 153 aa6.47□□□□□ -1.37
CLN6-209ENST00000569336 OR5A1Q8NGJ0 315 aa6.47□□□□□ -1.37
CLN6-209ENST00000569336 TMEM18Q96B42 140 aa6.47□□□□□ -1.37
CLN6-209ENST00000569336 IMMP2LQ96T52 175 aa6.47□□□□□ -1.37
CLN6-209ENST00000569336 CTDSP1Q9GZU7 261 aa6.47□□□□□ -1.37
CLN6-209ENST00000569336 UBR4Q5T4S7 5183 aa6.47□□□□□ -1.37
CLN6-209ENST00000569336 IGLV10-54A0A075B6I4 117 aa6.46□□□□□ -1.38
CLN6-209ENST00000569336 TRAV9-1A0A075B6T8 112 aa6.46□□□□□ -1.38
CLN6-209ENST00000569336 USP17L23D6RBM5 183 aa6.46□□□□□ -1.38
CLN6-209ENST00000569336 TNFRSF6BO95407 300 aa6.46□□□□□ -1.38
CLN6-209ENST00000569336 ESDP10768 282 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms