RNA–Protein interactions for RNA: ENST00000569204.1

EPB42-208, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 3

Gene EPB42, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-208ENST00000569204 TWIST1Q15672 202 aa10.39□□□□□ -0.75
EPB42-208ENST00000569204 MIAQ16674 131 aa10.39□□□□□ -0.75
EPB42-208ENST00000569204 OSTCQ9NRP0 149 aa10.39□□□□□ -0.75
EPB42-208ENST00000569204 V9GYV3 84 aa10.39□□□□□ -0.75
EPB42-208ENST00000569204 A8MWL6 223 aa10.38□□□□□ -0.75
EPB42-208ENST00000569204 HLA-DQA1P01909 254 aa10.38□□□□□ -0.75
EPB42-208ENST00000569204 FOXA3P55318 350 aaPredicted RBP10.38□□□□□ -0.75
EPB42-208ENST00000569204 FAM74A3Q4VXF1 159 aa10.38□□□□□ -0.75
EPB42-208ENST00000569204 PGLYRP4Q96LB8 373 aa10.38□□□□□ -0.75
EPB42-208ENST00000569204 TRBV25-1A0A075B6N4 114 aa10.37□□□□□ -0.75
EPB42-208ENST00000569204 TRAV26-2A0A0B4J265 109 aa10.37□□□□□ -0.75
EPB42-208ENST00000569204 HIGD1CA8MV81 97 aa10.37□□□□□ -0.75
EPB42-208ENST00000569204 USP17L23D6RBM5 183 aa10.37□□□□□ -0.75
EPB42-208ENST00000569204 KRTAP10-4P60372 401 aaPredicted RBP10.37□□□□□ -0.75
EPB42-208ENST00000569204 TSKUQ8WUA8 353 aa10.37□□□□□ -0.75
EPB42-208ENST00000569204 PRR34Q9NV39 138 aa10.37□□□□□ -0.75
EPB42-208ENST00000569204 NAT8Q9UHE5 227 aa10.37□□□□□ -0.75
EPB42-208ENST00000569204 H7C1H1 209 aa10.36□□□□□ -0.75
EPB42-208ENST00000569204 RBX1P62877 108 aa10.36□□□□□ -0.75
EPB42-208ENST00000569204 GAGE6Q13070 117 aa10.36□□□□□ -0.75
EPB42-208ENST00000569204 PEA15Q15121 130 aa10.36□□□□□ -0.75
EPB42-208ENST00000569204 ADIRFQ15847 76 aa10.36□□□□□ -0.75
EPB42-208ENST00000569204 TMEM241Q24JQ0 296 aa10.36□□□□□ -0.75
EPB42-208ENST00000569204 RASL11AQ6T310 242 aa10.36□□□□□ -0.75
EPB42-208ENST00000569204 GFRA4Q9GZZ7 299 aa10.36□□□□□ -0.75
EPB42-208ENST00000569204 SMDT1Q9H4I9 107 aa10.36□□□□□ -0.75
EPB42-208ENST00000569204 IQCJQ1A5X6 159 aa10.35□□□□□ -0.75
EPB42-208ENST00000569204 CLPSL2Q6UWE3 100 aa10.35□□□□□ -0.75
EPB42-208ENST00000569204 LINC00269Q8N2A0 174 aa10.35□□□□□ -0.75
EPB42-208ENST00000569204 GATD1Q8NB37 220 aa10.35□□□□□ -0.75
EPB42-208ENST00000569204 FAM231BA6NCW3 169 aa10.34□□□□□ -0.75
EPB42-208ENST00000569204 PRSS1P07477 247 aa10.34□□□□□ -0.75
EPB42-208ENST00000569204 DGAT2L7PQ6IED9 249 aa10.34□□□□□ -0.75
EPB42-208ENST00000569204 KRTAP26-1Q6PEX3 210 aa10.34□□□□□ -0.75
EPB42-208ENST00000569204 IGHV1-24A0A0C4DH33 117 aa10.33□□□□□ -0.76
EPB42-208ENST00000569204 IFITM2Q01629 132 aa10.33□□□□□ -0.76
EPB42-208ENST00000569204 RPL39LQ96EH5 51 aaKnown RBP10.33□□□□□ -0.76
EPB42-208ENST00000569204 NIT2Q9NQR4 276 aa10.33□□□□□ -0.76
EPB42-208ENST00000569204 A0A1B0GUT8 65 aa10.32□□□□□ -0.76
EPB42-208ENST00000569204 C9orf163Q8N9P6 203 aa10.32□□□□□ -0.76
EPB42-208ENST00000569204 NUP35Q8NFH5 326 aa10.32□□□□□ -0.76
EPB42-208ENST00000569204 GAS8-AS1O95177 125 aa10.31□□□□□ -0.76
EPB42-208ENST00000569204 REG3AQ06141 175 aa10.31□□□□□ -0.76
EPB42-208ENST00000569204 LRP1Q07954 4544 aaKnown RBP10.31□□□□□ -0.76
EPB42-208ENST00000569204 SMIM27A0A1W2PRY6 76 aa10.3□□□□□ -0.76
EPB42-208ENST00000569204 CLLU1Q5K131 121 aa10.3□□□□□ -0.76
EPB42-208ENST00000569204 C20orf203Q8NBC4 194 aa10.3□□□□□ -0.76
EPB42-208ENST00000569204 RNF185Q96GF1 192 aa10.3□□□□□ -0.76
EPB42-208ENST00000569204 IGLV10-54A0A075B6I4 117 aa10.29□□□□□ -0.76
EPB42-208ENST00000569204 OXTP01178 125 aa10.29□□□□□ -0.76
EPB42-208ENST00000569204 SMIM15Q7Z3B0 74 aa10.29□□□□□ -0.76
EPB42-208ENST00000569204 CLRN3Q8NCR9 226 aa10.29□□□□□ -0.76
EPB42-208ENST00000569204 BORCS7Q96B45 105 aa10.29□□□□□ -0.76
EPB42-208ENST00000569204 TMEM243Q9BU79 118 aa10.29□□□□□ -0.76
EPB42-208ENST00000569204 TMEM191AQ9H0A3 160 aa10.29□□□□□ -0.76
EPB42-208ENST00000569204 NAT8BQ9UHF3 227 aa10.29□□□□□ -0.76
EPB42-208ENST00000569204 FAT3Q8TDW7 4589 aa10.28□□□□□ -0.76
EPB42-208ENST00000569204 A0A1B0GUV1 79 aa10.28□□□□□ -0.76
EPB42-208ENST00000569204 RAB14P61106 215 aa10.28□□□□□ -0.76
EPB42-208ENST00000569204 RPL37AP61513 92 aaKnown RBP10.28□□□□□ -0.76
EPB42-208ENST00000569204 AMN1Q8IY45 258 aa10.28□□□□□ -0.76
EPB42-208ENST00000569204 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.28□□□□□ -0.76
EPB42-208ENST00000569204 IGLV4-60A0A075B6I1 120 aa10.27□□□□□ -0.77
EPB42-208ENST00000569204 TRAV8-4A0A0B4J246 113 aa10.27□□□□□ -0.77
EPB42-208ENST00000569204 RPS10P46783 165 aaKnown RBP10.27□□□□□ -0.77
EPB42-208ENST00000569204 RAB4AP20338 218 aa10.26□□□□□ -0.77
EPB42-208ENST00000569204 SDIM1Q6ZPB5 146 aa10.26□□□□□ -0.77
EPB42-208ENST00000569204 PKHD1L1Q86WI1 4243 aa10.25□□□□□ -0.77
EPB42-208ENST00000569204 TRBV6-5A0A0K0K1A5 114 aa10.25□□□□□ -0.77
EPB42-208ENST00000569204 hDV102S1A0JD36 115 aa10.25□□□□□ -0.77
EPB42-208ENST00000569204 SDHAF1A6NFY7 115 aa10.25□□□□□ -0.77
EPB42-208ENST00000569204 PANO1I0J062 215 aa10.25□□□□□ -0.77
EPB42-208ENST00000569204 NCR2O95944 276 aa10.25□□□□□ -0.77
EPB42-208ENST00000569204 CNBPP62633 177 aaKnown RBP10.25□□□□□ -0.77
EPB42-208ENST00000569204 RIGQ13278 110 aa10.25□□□□□ -0.77
EPB42-208ENST00000569204 COTL1Q14019 142 aa10.25□□□□□ -0.77
EPB42-208ENST00000569204 A0A1B0GXF2 115 aa10.24□□□□□ -0.77
EPB42-208ENST00000569204 SMKR1H3BMG3 65 aa10.24□□□□□ -0.77
EPB42-208ENST00000569204 UBE2L6O14933 153 aa10.24□□□□□ -0.77
EPB42-208ENST00000569204 ADCYAP1P18509 176 aa10.24□□□□□ -0.77
EPB42-208ENST00000569204 AMTP48728 403 aa10.24□□□□□ -0.77
EPB42-208ENST00000569204 SERTAD4-AS1Q5TG53 156 aa10.24□□□□□ -0.77
EPB42-208ENST00000569204 MRAP2Q96G30 205 aa10.24□□□□□ -0.77
EPB42-208ENST00000569204 HNRNPA3P51991 378 aaKnown RBP10.23□□□□□ -0.77
EPB42-208ENST00000569204 NRACQ8N912 160 aa10.23□□□□□ -0.77
EPB42-208ENST00000569204 PNRC1Q12796 327 aaPredicted RBP10.22□□□□□ -0.77
EPB42-208ENST00000569204 MRPL54Q6P161 138 aaKnown RBP10.22□□□□□ -0.77
EPB42-208ENST00000569204 AP5S1Q9NUS5 200 aa10.22□□□□□ -0.77
EPB42-208ENST00000569204 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.21□□□□□ -0.77
EPB42-208ENST00000569204 TSHBP01222 138 aa10.21□□□□□ -0.77
EPB42-208ENST00000569204 APCSP02743 223 aa10.21□□□□□ -0.77
EPB42-208ENST00000569204 SLPIP03973 132 aa10.21□□□□□ -0.77
EPB42-208ENST00000569204 CAMPP49913 170 aa10.21□□□□□ -0.77
EPB42-208ENST00000569204 CIRBPQ14011 172 aaKnown RBP10.21□□□□□ -0.77
EPB42-208ENST00000569204 MRPL51Q4U2R6 128 aaKnown RBP10.21□□□□□ -0.77
EPB42-208ENST00000569204 FAM104BQ5XKR9 115 aa10.21□□□□□ -0.77
EPB42-208ENST00000569204 TMEM242Q9NWH2 141 aa10.21□□□□□ -0.77
EPB42-208ENST00000569204 IGHV3-64A0A075B6Q5 118 aa10.2□□□□□ -0.78
EPB42-208ENST00000569204 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.2□□□□□ -0.78
EPB42-208ENST00000569204 IGKV2-29A2NJV5 120 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms