RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 P01737 135 aa9.33□□□□□ -0.92
USB1-214ENST00000568848 RPS20P60866 119 aaKnown RBP9.33□□□□□ -0.92
USB1-214ENST00000568848 CNBPP62633 177 aaKnown RBP9.33□□□□□ -0.92
USB1-214ENST00000568848 BLOC1S1P78537 153 aa9.33□□□□□ -0.92
USB1-214ENST00000568848 REG3AQ06141 175 aa9.33□□□□□ -0.92
USB1-214ENST00000568848 NUDT10Q8NFP7 164 aa9.33□□□□□ -0.92
USB1-214ENST00000568848 GTSF1Q8WW33 167 aa9.33□□□□□ -0.92
USB1-214ENST00000568848 SMIM12Q96EX1 92 aa9.33□□□□□ -0.92
USB1-214ENST00000568848 NUDT11Q96G61 164 aa9.33□□□□□ -0.92
USB1-214ENST00000568848 DPH3P1Q9H4G8 78 aa9.33□□□□□ -0.92
USB1-214ENST00000568848 SMIM17P0DL12 118 aa9.32□□□□□ -0.92
USB1-214ENST00000568848 LYZL1Q6UWQ5 148 aa9.32□□□□□ -0.92
USB1-214ENST00000568848 OCC1Q8TAD7 63 aa9.32□□□□□ -0.92
USB1-214ENST00000568848 LINC01600Q96MT4 127 aa9.32□□□□□ -0.92
USB1-214ENST00000568848 K7EN84 100 aa9.31□□□□□ -0.92
USB1-214ENST00000568848 MGPP08493 103 aa9.31□□□□□ -0.92
USB1-214ENST00000568848 TAGLN2P37802 199 aaKnown RBP9.31□□□□□ -0.92
USB1-214ENST00000568848 PRR3P79522 188 aaKnown RBP9.31□□□□□ -0.92
USB1-214ENST00000568848 COX6A2Q02221 97 aa9.31□□□□□ -0.92
USB1-214ENST00000568848 HIGD2BQ4VC39 106 aa9.31□□□□□ -0.92
USB1-214ENST00000568848 PRSS3P2Q8NHM4 247 aa9.31□□□□□ -0.92
USB1-214ENST00000568848 AP1S3Q96PC3 154 aa9.31□□□□□ -0.92
USB1-214ENST00000568848 RNASE7Q9H1E1 156 aaKnown RBP9.31□□□□□ -0.92
USB1-214ENST00000568848 IGKV3OR2-268A0A0C4DH90 116 aa9.3□□□□□ -0.92
USB1-214ENST00000568848 MAJINQ3KP22 176 aa9.3□□□□□ -0.92
USB1-214ENST00000568848 C15orf56Q8N910 161 aa9.3□□□□□ -0.92
USB1-214ENST00000568848 BIN3Q9NQY0 253 aa9.3□□□□□ -0.92
USB1-214ENST00000568848 PLAC8Q9NZF1 115 aa9.3□□□□□ -0.92
USB1-214ENST00000568848 TRBV25-1A0A075B6N4 114 aa9.29□□□□□ -0.92
USB1-214ENST00000568848 XKRY2A2RUG3 117 aa9.29□□□□□ -0.92
USB1-214ENST00000568848 CACNG7P62955 275 aa9.29□□□□□ -0.92
USB1-214ENST00000568848 CLRN3Q8NCR9 226 aa9.29□□□□□ -0.92
USB1-214ENST00000568848 F2Z2F3 143 aa9.28□□□□□ -0.92
USB1-214ENST00000568848 NTF3P20783 257 aa9.28□□□□□ -0.92
USB1-214ENST00000568848 CEBPGP53567 150 aa9.28□□□□□ -0.92
USB1-214ENST00000568848 IGHV1-24A0A0C4DH33 117 aa9.27□□□□□ -0.93
USB1-214ENST00000568848 GAGE12HA6NDE8 117 aa9.27□□□□□ -0.93
USB1-214ENST00000568848 M0QY20 66 aa9.27□□□□□ -0.93
USB1-214ENST00000568848 KRTAP10-8P60410 259 aa9.27□□□□□ -0.93
USB1-214ENST00000568848 IQCJQ1A5X6 159 aa9.27□□□□□ -0.93
USB1-214ENST00000568848 SUMO4Q6EEV6 95 aa9.27□□□□□ -0.93
USB1-214ENST00000568848 WDR73Q6P4I2 378 aa9.27□□□□□ -0.93
USB1-214ENST00000568848 RPP21Q9H633 154 aaKnown RBP9.27□□□□□ -0.93
USB1-214ENST00000568848 AP5S1Q9NUS5 200 aa9.27□□□□□ -0.93
USB1-214ENST00000568848 A0A096LNI7 61 aa9.26□□□□□ -0.93
USB1-214ENST00000568848 A0A0J9YXV3 536 aa9.26□□□□□ -0.93
USB1-214ENST00000568848 TMEM250H0YL14 139 aa9.26□□□□□ -0.93
USB1-214ENST00000568848 STPG4Q8N801 248 aa9.26□□□□□ -0.93
USB1-214ENST00000568848 C7orf33Q8WU49 177 aa9.26□□□□□ -0.93
USB1-214ENST00000568848 LINC00526Q96FQ7 95 aa9.26□□□□□ -0.93
USB1-214ENST00000568848 EIF5A2Q9GZV4 153 aaKnown RBP9.26□□□□□ -0.93
USB1-214ENST00000568848 TRGC1P0CF51 173 aa9.25□□□□□ -0.93
USB1-214ENST00000568848 CTRLP40313 264 aa9.25□□□□□ -0.93
USB1-214ENST00000568848 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.25□□□□□ -0.93
USB1-214ENST00000568848 RNF185Q96GF1 192 aa9.25□□□□□ -0.93
USB1-214ENST00000568848 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.24□□□□□ -0.93
USB1-214ENST00000568848 GATCO43716 136 aaKnown RBP9.24□□□□□ -0.93
USB1-214ENST00000568848 PKIAP61925 76 aa9.24□□□□□ -0.93
USB1-214ENST00000568848 TWIST1Q15672 202 aa9.24□□□□□ -0.93
USB1-214ENST00000568848 H7C1H1 209 aa9.23□□□□□ -0.93
USB1-214ENST00000568848 FOXA3P55318 350 aaPredicted RBP9.23□□□□□ -0.93
USB1-214ENST00000568848 RASL11AQ6T310 242 aa9.23□□□□□ -0.93
USB1-214ENST00000568848 FAM210AQ96ND0 272 aa9.23□□□□□ -0.93
USB1-214ENST00000568848 TMEM243Q9BU79 118 aa9.23□□□□□ -0.93
USB1-214ENST00000568848 SRP19P09132 144 aaKnown RBP9.22□□□□□ -0.93
USB1-214ENST00000568848 TMEM97Q5BJF2 176 aa9.22□□□□□ -0.93
USB1-214ENST00000568848 PGLYRP4Q96LB8 373 aa9.22□□□□□ -0.93
USB1-214ENST00000568848 SMIM7Q9BQ49 75 aa9.22□□□□□ -0.93
USB1-214ENST00000568848 CNFNQ9BYD5 112 aa9.22□□□□□ -0.93
USB1-214ENST00000568848 NIT2Q9NQR4 276 aa9.22□□□□□ -0.93
USB1-214ENST00000568848 TRAV26-2A0A0B4J265 109 aa9.21□□□□□ -0.94
USB1-214ENST00000568848 NDUFS6O75380 124 aaKnown RBP9.21□□□□□ -0.94
USB1-214ENST00000568848 FAM231DQ6ZW35 169 aa9.21□□□□□ -0.94
USB1-214ENST00000568848 TRAV8-4A0A0B4J246 113 aa9.2□□□□□ -0.94
USB1-214ENST00000568848 A8MWL6 223 aa9.2□□□□□ -0.94
USB1-214ENST00000568848 RPS10P46783 165 aaKnown RBP9.2□□□□□ -0.94
USB1-214ENST00000568848 GATD1Q8NB37 220 aa9.2□□□□□ -0.94
USB1-214ENST00000568848 ZNF727A8MUV8 499 aa9.19□□□□□ -0.94
USB1-214ENST00000568848 LINC01551Q86U37 167 aa9.19□□□□□ -0.94
USB1-214ENST00000568848 CHCHD10Q8WYQ3 142 aaPredicted RBP9.18□□□□□ -0.94
USB1-214ENST00000568848 RPL39LQ96EH5 51 aaKnown RBP9.18□□□□□ -0.94
USB1-214ENST00000568848 MUC2Q02817 5179 aa9.18□□□□□ -0.94
USB1-214ENST00000568848 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.17□□□□□ -0.94
USB1-214ENST00000568848 A0A1B0GUV1 79 aa9.17□□□□□ -0.94
USB1-214ENST00000568848 IGKV2-29A2NJV5 120 aaPredicted RBP9.17□□□□□ -0.94
USB1-214ENST00000568848 C9JQL5 133 aa9.17□□□□□ -0.94
USB1-214ENST00000568848 UBE2L6O14933 153 aa9.17□□□□□ -0.94
USB1-214ENST00000568848 AMTP48728 403 aa9.17□□□□□ -0.94
USB1-214ENST00000568848 SRSF3P84103 164 aaKnown RBP9.17□□□□□ -0.94
USB1-214ENST00000568848 SRSF9Q13242 221 aaKnown RBP eCLIP9.17□□□□□ -0.94
USB1-214ENST00000568848 SMIM15Q7Z3B0 74 aa9.17□□□□□ -0.94
USB1-214ENST00000568848 CT83Q5H943 113 aa9.16□□□□□ -0.94
USB1-214ENST00000568848 SPINK6Q6UWN8 80 aa9.16□□□□□ -0.94
USB1-214ENST00000568848 OSTCQ9NRP0 149 aa9.16□□□□□ -0.94
USB1-214ENST00000568848 HIGD1CA8MV81 97 aa9.15□□□□□ -0.94
USB1-214ENST00000568848 COTL1Q14019 142 aa9.15□□□□□ -0.94
USB1-214ENST00000568848 TMEM241Q24JQ0 296 aa9.15□□□□□ -0.94
USB1-214ENST00000568848 REG3GQ6UW15 175 aa9.15□□□□□ -0.94
USB1-214ENST00000568848 TEX261Q6UWH6 196 aa9.15□□□□□ -0.94
USB1-214ENST00000568848 TSKUQ8WUA8 353 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms