RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 RPS20P60866 119 aaKnown RBP9.91□□□□□ -0.82
HERPUD1-215ENST00000568676 SSTP61278 116 aa9.91□□□□□ -0.82
HERPUD1-215ENST00000568676 CACNG7P62955 275 aa9.91□□□□□ -0.82
HERPUD1-215ENST00000568676 PRR3P79522 188 aaKnown RBP9.91□□□□□ -0.82
HERPUD1-215ENST00000568676 COX6A2Q02221 97 aa9.91□□□□□ -0.82
HERPUD1-215ENST00000568676 SUMO4Q6EEV6 95 aa9.91□□□□□ -0.82
HERPUD1-215ENST00000568676 RASL11AQ6T310 242 aa9.91□□□□□ -0.82
HERPUD1-215ENST00000568676 NIT2Q9NQR4 276 aa9.91□□□□□ -0.82
HERPUD1-215ENST00000568676 A0A0J9YXV3 536 aa9.9□□□□□ -0.82
HERPUD1-215ENST00000568676 NKX2-5P52952 324 aaPredicted RBP9.9□□□□□ -0.82
HERPUD1-215ENST00000568676 REG3GQ6UW15 175 aa9.9□□□□□ -0.82
HERPUD1-215ENST00000568676 C9orf62Q8N4C0 152 aa9.9□□□□□ -0.82
HERPUD1-215ENST00000568676 C15orf56Q8N910 161 aa9.9□□□□□ -0.82
HERPUD1-215ENST00000568676 FER1L6-AS1Q8NA97 138 aa9.9□□□□□ -0.82
HERPUD1-215ENST00000568676 GTSF1Q8WW33 167 aa9.9□□□□□ -0.82
HERPUD1-215ENST00000568676 LINC00474Q9P2X8 69 aa9.9□□□□□ -0.82
HERPUD1-215ENST00000568676 F2Z2F3 143 aa9.89□□□□□ -0.83
HERPUD1-215ENST00000568676 TRGC1P0CF51 173 aa9.89□□□□□ -0.83
HERPUD1-215ENST00000568676 IGLC6P0CF74 106 aa9.89□□□□□ -0.83
HERPUD1-215ENST00000568676 COTL1Q14019 142 aa9.89□□□□□ -0.83
HERPUD1-215ENST00000568676 MAJINQ3KP22 176 aa9.89□□□□□ -0.83
HERPUD1-215ENST00000568676 SPINK6Q6UWN8 80 aa9.89□□□□□ -0.83
HERPUD1-215ENST00000568676 GFRA4Q9GZZ7 299 aa9.89□□□□□ -0.83
HERPUD1-215ENST00000568676 RNF213Q63HN8 5207 aa9.89□□□□□ -0.83
HERPUD1-215ENST00000568676 XKRY2A2RUG3 117 aa9.88□□□□□ -0.83
HERPUD1-215ENST00000568676 AMTP48728 403 aa9.88□□□□□ -0.83
HERPUD1-215ENST00000568676 STPG4Q8N801 248 aa9.88□□□□□ -0.83
HERPUD1-215ENST00000568676 GAGE12HA6NDE8 117 aa9.87□□□□□ -0.83
HERPUD1-215ENST00000568676 RPL35P42766 123 aaKnown RBP9.87□□□□□ -0.83
HERPUD1-215ENST00000568676 SMIM12Q96EX1 92 aa9.87□□□□□ -0.83
HERPUD1-215ENST00000568676 TPPP3Q9BW30 176 aa9.87□□□□□ -0.83
HERPUD1-215ENST00000568676 GVQW2A0A096LPI5 108 aaPredicted RBP9.86□□□□□ -0.83
HERPUD1-215ENST00000568676 TRAV1-1A0A0B4J248 108 aa9.86□□□□□ -0.83
HERPUD1-215ENST00000568676 IGKV2-24A0A0C4DH68 120 aa9.86□□□□□ -0.83
HERPUD1-215ENST00000568676 A0A1B0GV50 99 aa9.86□□□□□ -0.83
HERPUD1-215ENST00000568676 KRTAP10-8P60410 259 aa9.86□□□□□ -0.83
HERPUD1-215ENST00000568676 OR2D3Q8NGH3 330 aa9.86□□□□□ -0.83
HERPUD1-215ENST00000568676 PRSS3P2Q8NHM4 247 aa9.86□□□□□ -0.83
HERPUD1-215ENST00000568676 H7C423 109 aa9.85□□□□□ -0.83
HERPUD1-215ENST00000568676 MANBALQ9NQG1 85 aa9.85□□□□□ -0.83
HERPUD1-215ENST00000568676 CHCHD10Q8WYQ3 142 aaPredicted RBP9.84□□□□□ -0.83
HERPUD1-215ENST00000568676 C11orf52Q96A22 123 aa9.84□□□□□ -0.83
HERPUD1-215ENST00000568676 NCR2O95944 276 aa9.83□□□□□ -0.84
HERPUD1-215ENST00000568676 IFNA1P01562 189 aa9.83□□□□□ -0.84
HERPUD1-215ENST00000568676 HIGD2BQ4VC39 106 aa9.83□□□□□ -0.84
HERPUD1-215ENST00000568676 AMMECR1LQ6DCA0 310 aa9.83□□□□□ -0.84
HERPUD1-215ENST00000568676 BIN3Q9NQY0 253 aa9.83□□□□□ -0.84
HERPUD1-215ENST00000568676 GNG13Q9P2W3 67 aa9.83□□□□□ -0.84
HERPUD1-215ENST00000568676 C19orf71A6NCJ1 209 aa9.82□□□□□ -0.84
HERPUD1-215ENST00000568676 NTF3P20783 257 aa9.82□□□□□ -0.84
HERPUD1-215ENST00000568676 BLOC1S1P78537 153 aa9.82□□□□□ -0.84
HERPUD1-215ENST00000568676 CENPWQ5EE01 88 aa9.82□□□□□ -0.84
HERPUD1-215ENST00000568676 Q6ZRP5 223 aa9.82□□□□□ -0.84
HERPUD1-215ENST00000568676 LYPD6BQ8NI32 183 aa9.82□□□□□ -0.84
HERPUD1-215ENST00000568676 A0A096LNI7 61 aa9.81□□□□□ -0.84
HERPUD1-215ENST00000568676 IGKV3OR2-268A0A0C4DH90 116 aa9.81□□□□□ -0.84
HERPUD1-215ENST00000568676 TAGLN2P37802 199 aaKnown RBP9.81□□□□□ -0.84
HERPUD1-215ENST00000568676 ALKAL2Q6UX46 152 aa9.81□□□□□ -0.84
HERPUD1-215ENST00000568676 ZNF25P17030 456 aaPredicted RBP9.8□□□□□ -0.84
HERPUD1-215ENST00000568676 CCL20P78556 96 aa9.8□□□□□ -0.84
HERPUD1-215ENST00000568676 SRSF9Q13242 221 aaKnown RBP eCLIP9.8□□□□□ -0.84
HERPUD1-215ENST00000568676 LYZL1Q6UWQ5 148 aa9.8□□□□□ -0.84
HERPUD1-215ENST00000568676 GNG4P50150 75 aa9.79□□□□□ -0.84
HERPUD1-215ENST00000568676 RNASEKQ6P5S7 137 aaKnown RBP9.79□□□□□ -0.84
HERPUD1-215ENST00000568676 CNFNQ9BYD5 112 aa9.79□□□□□ -0.84
HERPUD1-215ENST00000568676 IGHV1-58A0A0C4DH39 117 aa9.78□□□□□ -0.84
HERPUD1-215ENST00000568676 PDE6DO43924 150 aa9.78□□□□□ -0.84
HERPUD1-215ENST00000568676 CTRLP40313 264 aa9.78□□□□□ -0.84
HERPUD1-215ENST00000568676 MEF2BQ02080 365 aaPredicted RBP9.78□□□□□ -0.84
HERPUD1-215ENST00000568676 FOXI1Q12951 378 aa9.78□□□□□ -0.84
HERPUD1-215ENST00000568676 TEX261Q6UWH6 196 aa9.78□□□□□ -0.84
HERPUD1-215ENST00000568676 OR5A1Q8NGJ0 315 aa9.78□□□□□ -0.84
HERPUD1-215ENST00000568676 FAM210AQ96ND0 272 aa9.78□□□□□ -0.84
HERPUD1-215ENST00000568676 APCSP02743 223 aa9.77□□□□□ -0.85
HERPUD1-215ENST00000568676 BCL2P10415 239 aa9.77□□□□□ -0.85
HERPUD1-215ENST00000568676 FGF6P10767 208 aa9.77□□□□□ -0.85
HERPUD1-215ENST00000568676 TWIST1Q15672 202 aa9.77□□□□□ -0.85
HERPUD1-215ENST00000568676 GATD1Q8NB37 220 aa9.77□□□□□ -0.85
HERPUD1-215ENST00000568676 BTF3L4Q96K17 158 aa9.77□□□□□ -0.85
HERPUD1-215ENST00000568676 CARD19Q96LW7 228 aa9.77□□□□□ -0.85
HERPUD1-215ENST00000568676 SMIM15Q7Z3B0 74 aa9.76□□□□□ -0.85
HERPUD1-215ENST00000568676 TMEM101Q96IK0 257 aa9.76□□□□□ -0.85
HERPUD1-215ENST00000568676 FAM231BA6NCW3 169 aa9.75□□□□□ -0.85
HERPUD1-215ENST00000568676 ODF1Q14990 250 aa9.75□□□□□ -0.85
HERPUD1-215ENST00000568676 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.74□□□□□ -0.85
HERPUD1-215ENST00000568676 IGKV2-29A2NJV5 120 aaPredicted RBP9.74□□□□□ -0.85
HERPUD1-215ENST00000568676 ZNF561-AS1K7EIQ3 104 aa9.74□□□□□ -0.85
HERPUD1-215ENST00000568676 GAS8-AS1O95177 125 aa9.74□□□□□ -0.85
HERPUD1-215ENST00000568676 XCL1P47992 114 aa9.74□□□□□ -0.85
HERPUD1-215ENST00000568676 ISOC2Q96AB3 205 aa9.74□□□□□ -0.85
HERPUD1-215ENST00000568676 LINC00959A0A1B0GUT2 108 aa9.73□□□□□ -0.85
HERPUD1-215ENST00000568676 RAB19A4D1S5 217 aa9.73□□□□□ -0.85
HERPUD1-215ENST00000568676 SDHAF1A6NFY7 115 aa9.73□□□□□ -0.85
HERPUD1-215ENST00000568676 SYCNQ0VAF6 134 aa9.73□□□□□ -0.85
HERPUD1-215ENST00000568676 MED9Q9NWA0 146 aa9.73□□□□□ -0.85
HERPUD1-215ENST00000568676 TRAV26-2A0A0B4J265 109 aa9.72□□□□□ -0.85
HERPUD1-215ENST00000568676 I3L3M4 83 aa9.72□□□□□ -0.85
HERPUD1-215ENST00000568676 CCL25O15444 150 aa9.72□□□□□ -0.85
HERPUD1-215ENST00000568676 PTTG1IPP53801 180 aa9.72□□□□□ -0.85
HERPUD1-215ENST00000568676 SS18Q15532 418 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms