RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 KRTAP1-1Q07627 177 aa7.01□□□□□ -1.29
TCF4-240ENST00000568673 Q6ZSN1 163 aa7.01□□□□□ -1.29
TCF4-240ENST00000568673 STHQ8IWL8 128 aa7.01□□□□□ -1.29
TCF4-240ENST00000568673 Q9UF83 564 aa7.01□□□□□ -1.29
TCF4-240ENST00000568673 ITPR2Q14571 2701 aa7.01□□□□□ -1.29
TCF4-240ENST00000568673 TMEM223A0PJW6 202 aa7□□□□□ -1.29
TCF4-240ENST00000568673 J3QQQ9 107 aa7□□□□□ -1.29
TCF4-240ENST00000568673 IGHV3-53P01767 116 aa7□□□□□ -1.29
TCF4-240ENST00000568673 CRYBA4P53673 196 aa7□□□□□ -1.29
TCF4-240ENST00000568673 LINC01006Q8NI28 216 aa7□□□□□ -1.29
TCF4-240ENST00000568673 AMELXQ99217 191 aa7□□□□□ -1.29
TCF4-240ENST00000568673 CITED2Q99967 270 aaPredicted RBP7□□□□□ -1.29
TCF4-240ENST00000568673 XCL2Q9UBD3 114 aa7□□□□□ -1.29
TCF4-240ENST00000568673 TSSC4Q9Y5U2 329 aaPredicted RBP7□□□□□ -1.29
TCF4-240ENST00000568673 SETD2Q9BYW2 2564 aaPredicted RBP7□□□□□ -1.29
TCF4-240ENST00000568673 RRN3P1Q2M238 152 aa7□□□□□ -1.29
TCF4-240ENST00000568673 SLC25A29Q8N8R3 303 aa7□□□□□ -1.29
TCF4-240ENST00000568673 FAM104AQ969W3 186 aa7□□□□□ -1.29
TCF4-240ENST00000568673 DNAJC30Q96LL9 226 aa7□□□□□ -1.29
TCF4-240ENST00000568673 MRPL16Q9NX20 251 aaKnown RBP7□□□□□ -1.29
TCF4-240ENST00000568673 ACANP16112 2415 aa6.99□□□□□ -1.29
TCF4-240ENST00000568673 A0A0J9YXV3 536 aa6.99□□□□□ -1.29
TCF4-240ENST00000568673 RS1O15537 224 aa6.99□□□□□ -1.29
TCF4-240ENST00000568673 RNASE1P07998 156 aaKnown RBP6.99□□□□□ -1.29
TCF4-240ENST00000568673 LGALS3P17931 250 aaKnown RBP6.99□□□□□ -1.29
TCF4-240ENST00000568673 RNF151Q2KHN1 245 aa6.99□□□□□ -1.29
TCF4-240ENST00000568673 C16orf95Q9H693 158 aa6.99□□□□□ -1.29
TCF4-240ENST00000568673 YAE1D1Q9NRH1 226 aa6.99□□□□□ -1.29
TCF4-240ENST00000568673 SPANXB1Q9NS25 103 aaPredicted RBP6.99□□□□□ -1.29
TCF4-240ENST00000568673 LEPROTO15243 131 aa6.98□□□□□ -1.29
TCF4-240ENST00000568673 ZNF22P17026 224 aaPredicted RBP6.98□□□□□ -1.29
TCF4-240ENST00000568673 AZU1P20160 251 aa6.98□□□□□ -1.29
TCF4-240ENST00000568673 UBE2D1P51668 147 aa6.98□□□□□ -1.29
TCF4-240ENST00000568673 C1orf158Q8N1D5 194 aa6.98□□□□□ -1.29
TCF4-240ENST00000568673 CHCHD7Q9BUK0 85 aa6.98□□□□□ -1.29
TCF4-240ENST00000568673 MRPS36P82909 103 aaKnown RBP6.97□□□□□ -1.29
TCF4-240ENST00000568673 IGHV3OR16-12A0A075B7B8 117 aa6.97□□□□□ -1.29
TCF4-240ENST00000568673 SAP30O75446 220 aa6.97□□□□□ -1.29
TCF4-240ENST00000568673 IGHV3-30P01768 117 aa6.97□□□□□ -1.29
TCF4-240ENST00000568673 IGHV3-30-5P0DP03 117 aa6.97□□□□□ -1.29
TCF4-240ENST00000568673 CEMP1Q6PRD7 247 aaPredicted RBP6.97□□□□□ -1.29
TCF4-240ENST00000568673 IL17DQ8TAD2 202 aa6.97□□□□□ -1.29
TCF4-240ENST00000568673 SPANXA1Q9NS26 97 aa6.97□□□□□ -1.29
TCF4-240ENST00000568673 UBE2D4Q9Y2X8 147 aa6.97□□□□□ -1.29
TCF4-240ENST00000568673 HELZ2Q9BYK8 2649 aaKnown RBP6.97□□□□□ -1.29
TCF4-240ENST00000568673 MTORP42345 2549 aa6.97□□□□□ -1.29
TCF4-240ENST00000568673 F8W1H4 67 aa6.96□□□□□ -1.29
TCF4-240ENST00000568673 CMC4P56277 68 aaPredicted RBP6.96□□□□□ -1.29
TCF4-240ENST00000568673 KRTAP3-3Q9BYR6 98 aa6.96□□□□□ -1.29
TCF4-240ENST00000568673 KRTAP3-2Q9BYR7 98 aa6.96□□□□□ -1.29
TCF4-240ENST00000568673 PGPEP1Q9NXJ5 209 aa6.96□□□□□ -1.29
TCF4-240ENST00000568673 J3QKU1 62 aa6.96□□□□□ -1.3
TCF4-240ENST00000568673 PLA2G2AP14555 144 aa6.96□□□□□ -1.3
TCF4-240ENST00000568673 COTL1Q14019 142 aa6.96□□□□□ -1.3
TCF4-240ENST00000568673 VPS25Q9BRG1 176 aa6.96□□□□□ -1.3
TCF4-240ENST00000568673 SETXQ7Z333 2677 aaKnown RBP6.95□□□□□ -1.3
TCF4-240ENST00000568673 H3BMG7 143 aa6.95□□□□□ -1.3
TCF4-240ENST00000568673 UNC79Q9P2D8 2635 aa6.95□□□□□ -1.3
TCF4-240ENST00000568673 IGHV3-64A0A075B6Q5 118 aa6.95□□□□□ -1.3
TCF4-240ENST00000568673 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.95□□□□□ -1.3
TCF4-240ENST00000568673 TRGV1A0A0A0MS02 117 aa6.95□□□□□ -1.3
TCF4-240ENST00000568673 IGHV3-38A0A0C4DH36 116 aa6.95□□□□□ -1.3
TCF4-240ENST00000568673 IGKV2-29A2NJV5 120 aaPredicted RBP6.95□□□□□ -1.3
TCF4-240ENST00000568673 G3V4G9 280 aa6.95□□□□□ -1.3
TCF4-240ENST00000568673 NDUFA11Q86Y39 141 aa6.95□□□□□ -1.3
TCF4-240ENST00000568673 TMEM263Q8WUH6 116 aaKnown RBP6.95□□□□□ -1.3
TCF4-240ENST00000568673 TINCRA0A1B0GVN0 87 aa6.94□□□□□ -1.3
TCF4-240ENST00000568673 A4D1N5 150 aa6.94□□□□□ -1.3
TCF4-240ENST00000568673 APOMO95445 188 aa6.94□□□□□ -1.3
TCF4-240ENST00000568673 RNASE13Q5GAN3 156 aaKnown RBP6.94□□□□□ -1.3
TCF4-240ENST00000568673 FAM110AQ9BQ89 295 aa6.94□□□□□ -1.3
TCF4-240ENST00000568673 IGLV1-51P01701 117 aa6.94□□□□□ -1.3
TCF4-240ENST00000568673 CFC1BP0CG36 223 aa6.94□□□□□ -1.3
TCF4-240ENST00000568673 CFC1P0CG37 223 aa6.94□□□□□ -1.3
TCF4-240ENST00000568673 IGHV3-30-3P0DP02 117 aa6.94□□□□□ -1.3
TCF4-240ENST00000568673 ZNF418Q8TF45 676 aaPredicted RBP6.94□□□□□ -1.3
TCF4-240ENST00000568673 TIMM21Q9BVV7 248 aa6.94□□□□□ -1.3
TCF4-240ENST00000568673 TSPAN13O95857 204 aa6.93□□□□□ -1.3
TCF4-240ENST00000568673 GIG44P09565 113 aaPredicted RBP6.93□□□□□ -1.3
TCF4-240ENST00000568673 HILS1P60008 231 aa6.93□□□□□ -1.3
TCF4-240ENST00000568673 C10orf126Q8N4M7 172 aa6.93□□□□□ -1.3
TCF4-240ENST00000568673 KMT2BQ9UMN6 2715 aaPredicted RBP6.93□□□□□ -1.3
TCF4-240ENST00000568673 JMJD1CQ15652 2540 aa6.93□□□□□ -1.3
TCF4-240ENST00000568673 IGHV1-58A0A0C4DH39 117 aa6.93□□□□□ -1.3
TCF4-240ENST00000568673 TRBV10-1A0A0K0K1A3 114 aa6.93□□□□□ -1.3
TCF4-240ENST00000568673 PCP4P48539 62 aa6.93□□□□□ -1.3
TCF4-240ENST00000568673 GAGE13Q4V321 117 aa6.93□□□□□ -1.3
TCF4-240ENST00000568673 Q6ZTI0 123 aa6.93□□□□□ -1.3
TCF4-240ENST00000568673 NOTCH3Q9UM47 2321 aa6.92□□□□□ -1.3
TCF4-240ENST00000568673 A0A0J9YXY3 114 aa6.92□□□□□ -1.3
TCF4-240ENST00000568673 ADARB2-AS1A8MUL3 147 aa6.92□□□□□ -1.3
TCF4-240ENST00000568673 TMEM238C9JI98 176 aa6.92□□□□□ -1.3
TCF4-240ENST00000568673 UBE2D3P61077 147 aa6.92□□□□□ -1.3
TCF4-240ENST00000568673 UBE2D2P62837 147 aa6.92□□□□□ -1.3
TCF4-240ENST00000568673 RPL24P83731 157 aaKnown RBP6.92□□□□□ -1.3
TCF4-240ENST00000568673 DAZ2Q13117 558 aaKnown RBP6.92□□□□□ -1.3
TCF4-240ENST00000568673 WFDC2Q14508 124 aa6.92□□□□□ -1.3
TCF4-240ENST00000568673 Q6ZUT4 128 aa6.92□□□□□ -1.3
TCF4-240ENST00000568673 C19orf73Q9NVV2 129 aa6.92□□□□□ -1.3
TCF4-240ENST00000568673 TRAV8-3A0A0A6YYJ7 113 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms