RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 SLPIP03973 132 aa9.57□□□□□ -0.88
COMMD4-223ENST00000568301 MGPP08493 103 aa9.57□□□□□ -0.88
COMMD4-223ENST00000568301 TAGLN2P37802 199 aaKnown RBP9.57□□□□□ -0.88
COMMD4-223ENST00000568301 RASL11AQ6T310 242 aa9.57□□□□□ -0.88
COMMD4-223ENST00000568301 C11orf52Q96A22 123 aa9.57□□□□□ -0.88
COMMD4-223ENST00000568301 PGLYRP4Q96LB8 373 aa9.57□□□□□ -0.88
COMMD4-223ENST00000568301 TPPP3Q9BW30 176 aa9.57□□□□□ -0.88
COMMD4-223ENST00000568301 A0A087WYN8 130 aa9.56□□□□□ -0.88
COMMD4-223ENST00000568301 OR2D3Q8NGH3 330 aa9.56□□□□□ -0.88
COMMD4-223ENST00000568301 MANBALQ9NQG1 85 aa9.56□□□□□ -0.88
COMMD4-223ENST00000568301 NIT2Q9NQR4 276 aa9.56□□□□□ -0.88
COMMD4-223ENST00000568301 XKRY2A2RUG3 117 aa9.55□□□□□ -0.88
COMMD4-223ENST00000568301 C19orf71A6NCJ1 209 aa9.55□□□□□ -0.88
COMMD4-223ENST00000568301 CENPWQ5EE01 88 aa9.55□□□□□ -0.88
COMMD4-223ENST00000568301 SMIM12Q96EX1 92 aa9.55□□□□□ -0.88
COMMD4-223ENST00000568301 GFRA4Q9GZZ7 299 aa9.55□□□□□ -0.88
COMMD4-223ENST00000568301 TRGC1P0CF51 173 aa9.54□□□□□ -0.88
COMMD4-223ENST00000568301 CCL20P78556 96 aa9.54□□□□□ -0.88
COMMD4-223ENST00000568301 SPACA4Q8TDM5 124 aa9.54□□□□□ -0.88
COMMD4-223ENST00000568301 PLAC8Q9NZF1 115 aa9.54□□□□□ -0.88
COMMD4-223ENST00000568301 GNG13Q9P2W3 67 aa9.54□□□□□ -0.88
COMMD4-223ENST00000568301 UBE2L6O14933 153 aa9.53□□□□□ -0.88
COMMD4-223ENST00000568301 NDUFS6O75380 124 aaKnown RBP9.53□□□□□ -0.88
COMMD4-223ENST00000568301 IFNA1P01562 189 aa9.53□□□□□ -0.88
COMMD4-223ENST00000568301 CHTF8P0CG12 524 aa9.53□□□□□ -0.88
COMMD4-223ENST00000568301 WDR73Q6P4I2 378 aa9.53□□□□□ -0.88
COMMD4-223ENST00000568301 CFAP161Q6P656 301 aa9.53□□□□□ -0.88
COMMD4-223ENST00000568301 DPH3P1Q9H4G8 78 aa9.53□□□□□ -0.88
COMMD4-223ENST00000568301 NTF3P20783 257 aa9.52□□□□□ -0.89
COMMD4-223ENST00000568301 GNG4P50150 75 aa9.52□□□□□ -0.89
COMMD4-223ENST00000568301 COTL1Q14019 142 aa9.52□□□□□ -0.89
COMMD4-223ENST00000568301 RAB19A4D1S5 217 aa9.51□□□□□ -0.89
COMMD4-223ENST00000568301 AMTP48728 403 aa9.51□□□□□ -0.89
COMMD4-223ENST00000568301 LYZL1Q6UWQ5 148 aa9.51□□□□□ -0.89
COMMD4-223ENST00000568301 BIN3Q9NQY0 253 aa9.51□□□□□ -0.89
COMMD4-223ENST00000568301 RPS10P46783 165 aaKnown RBP9.5□□□□□ -0.89
COMMD4-223ENST00000568301 C15orf56Q8N910 161 aa9.5□□□□□ -0.89
COMMD4-223ENST00000568301 C7orf33Q8WU49 177 aa9.5□□□□□ -0.89
COMMD4-223ENST00000568301 GAGE12HA6NDE8 117 aa9.49□□□□□ -0.89
COMMD4-223ENST00000568301 PDE6DO43924 150 aa9.49□□□□□ -0.89
COMMD4-223ENST00000568301 BCL2P10415 239 aa9.49□□□□□ -0.89
COMMD4-223ENST00000568301 MEF2BQ02080 365 aaPredicted RBP9.49□□□□□ -0.89
COMMD4-223ENST00000568301 COX6A2Q02221 97 aa9.49□□□□□ -0.89
COMMD4-223ENST00000568301 CNFNQ9BYD5 112 aa9.49□□□□□ -0.89
COMMD4-223ENST00000568301 TRBV20OR9-2A0A075B6H5 130 aa9.48□□□□□ -0.89
COMMD4-223ENST00000568301 PHOX2AO14813 284 aa9.48□□□□□ -0.89
COMMD4-223ENST00000568301 CTRLP40313 264 aa9.48□□□□□ -0.89
COMMD4-223ENST00000568301 H7C423 109 aa9.47□□□□□ -0.89
COMMD4-223ENST00000568301 RAB14P61106 215 aa9.47□□□□□ -0.89
COMMD4-223ENST00000568301 TWIST1Q15672 202 aa9.47□□□□□ -0.89
COMMD4-223ENST00000568301 GATD1Q8NB37 220 aa9.47□□□□□ -0.89
COMMD4-223ENST00000568301 NUDT10Q8NFP7 164 aa9.47□□□□□ -0.89
COMMD4-223ENST00000568301 NUDT11Q96G61 164 aa9.47□□□□□ -0.89
COMMD4-223ENST00000568301 SMDT1Q9H4I9 107 aa9.47□□□□□ -0.89
COMMD4-223ENST00000568301 MED9Q9NWA0 146 aa9.47□□□□□ -0.89
COMMD4-223ENST00000568301 NCR2O95944 276 aa9.46□□□□□ -0.9
COMMD4-223ENST00000568301 ODF1Q14990 250 aa9.46□□□□□ -0.9
COMMD4-223ENST00000568301 PRSS3P2Q8NHM4 247 aa9.46□□□□□ -0.9
COMMD4-223ENST00000568301 FAM210AQ96ND0 272 aa9.46□□□□□ -0.9
COMMD4-223ENST00000568301 GVQW2A0A096LPI5 108 aaPredicted RBP9.45□□□□□ -0.9
COMMD4-223ENST00000568301 IGKV3OR2-268A0A0C4DH90 116 aa9.45□□□□□ -0.9
COMMD4-223ENST00000568301 TMEM250H0YL14 139 aa9.45□□□□□ -0.9
COMMD4-223ENST00000568301 IFITM2Q01629 132 aa9.45□□□□□ -0.9
COMMD4-223ENST00000568301 MAJINQ3KP22 176 aa9.45□□□□□ -0.9
COMMD4-223ENST00000568301 AMMECR1LQ6DCA0 310 aa9.45□□□□□ -0.9
COMMD4-223ENST00000568301 GTSF1Q8WW33 167 aa9.45□□□□□ -0.9
COMMD4-223ENST00000568301 CHCHD10Q8WYQ3 142 aaPredicted RBP9.45□□□□□ -0.9
COMMD4-223ENST00000568301 LINC01600Q96MT4 127 aa9.45□□□□□ -0.9
COMMD4-223ENST00000568301 HIGD2BQ4VC39 106 aa9.44□□□□□ -0.9
COMMD4-223ENST00000568301 CLLU1Q5K131 121 aa9.44□□□□□ -0.9
COMMD4-223ENST00000568301 TRAV26-2A0A0B4J265 109 aa9.43□□□□□ -0.9
COMMD4-223ENST00000568301 IGKV2-24A0A0C4DH68 120 aa9.43□□□□□ -0.9
COMMD4-223ENST00000568301 PRR3P79522 188 aaKnown RBP9.43□□□□□ -0.9
COMMD4-223ENST00000568301 RNASEKQ6P5S7 137 aaKnown RBP9.43□□□□□ -0.9
COMMD4-223ENST00000568301 STPG4Q8N801 248 aa9.43□□□□□ -0.9
COMMD4-223ENST00000568301 EIF5A2Q9GZV4 153 aaKnown RBP9.43□□□□□ -0.9
COMMD4-223ENST00000568301 RPP21Q9H633 154 aaKnown RBP9.43□□□□□ -0.9
COMMD4-223ENST00000568301 FGF6P10767 208 aa9.42□□□□□ -0.9
COMMD4-223ENST00000568301 FOXI1Q12951 378 aa9.42□□□□□ -0.9
COMMD4-223ENST00000568301 PEA15Q15121 130 aa9.42□□□□□ -0.9
COMMD4-223ENST00000568301 SMIM15Q7Z3B0 74 aa9.42□□□□□ -0.9
COMMD4-223ENST00000568301 LINC00474Q9P2X8 69 aa9.42□□□□□ -0.9
COMMD4-223ENST00000568301 SDHAF1A6NFY7 115 aa9.41□□□□□ -0.9
COMMD4-223ENST00000568301 APCSP02743 223 aa9.41□□□□□ -0.9
COMMD4-223ENST00000568301 ZNF25P17030 456 aaPredicted RBP9.41□□□□□ -0.9
COMMD4-223ENST00000568301 OR5A1Q8NGJ0 315 aa9.41□□□□□ -0.9
COMMD4-223ENST00000568301 OCC1Q8TAD7 63 aa9.41□□□□□ -0.9
COMMD4-223ENST00000568301 RPL39LQ96EH5 51 aaKnown RBP9.41□□□□□ -0.9
COMMD4-223ENST00000568301 RNASE7Q9H1E1 156 aaKnown RBP9.41□□□□□ -0.9
COMMD4-223ENST00000568301 PKIGQ9Y2B9 76 aa9.41□□□□□ -0.9
COMMD4-223ENST00000568301 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.4□□□□□ -0.9
COMMD4-223ENST00000568301 A0A096LNI7 61 aa9.4□□□□□ -0.9
COMMD4-223ENST00000568301 IGKV2-29A2NJV5 120 aaPredicted RBP9.4□□□□□ -0.9
COMMD4-223ENST00000568301 A0A0J9YXV3 536 aa9.39□□□□□ -0.91
COMMD4-223ENST00000568301 FAM231BA6NCW3 169 aa9.39□□□□□ -0.91
COMMD4-223ENST00000568301 I3L3M4 83 aa9.39□□□□□ -0.91
COMMD4-223ENST00000568301 K7EN84 100 aa9.39□□□□□ -0.91
COMMD4-223ENST00000568301 SRP19P09132 144 aaKnown RBP9.39□□□□□ -0.91
COMMD4-223ENST00000568301 SPINK6Q6UWN8 80 aa9.39□□□□□ -0.91
COMMD4-223ENST00000568301 BTF3L4Q96K17 158 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms