RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 CNFNQ9BYD5 112 aa6.28□□□□□ -1.4
SF3B3-211ENST00000568291 V9GYV3 84 aa6.28□□□□□ -1.4
SF3B3-211ENST00000568291 HERC1Q15751 4861 aa6.27□□□□□ -1.41
SF3B3-211ENST00000568291 IGLV5-52A0A0A0MRZ9 124 aa6.27□□□□□ -1.41
SF3B3-211ENST00000568291 SMKR1H3BMG3 65 aa6.27□□□□□ -1.41
SF3B3-211ENST00000568291 LINC00269Q8N2A0 174 aa6.27□□□□□ -1.41
SF3B3-211ENST00000568291 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.27□□□□□ -1.41
SF3B3-211ENST00000568291 TSKUQ8WUA8 353 aa6.27□□□□□ -1.41
SF3B3-211ENST00000568291 TM2D2Q9BX73 214 aa6.27□□□□□ -1.41
SF3B3-211ENST00000568291 GFRA4Q9GZZ7 299 aa6.27□□□□□ -1.41
SF3B3-211ENST00000568291 OSTCQ9NRP0 149 aa6.27□□□□□ -1.41
SF3B3-211ENST00000568291 IGLV4-60A0A075B6I1 120 aa6.26□□□□□ -1.41
SF3B3-211ENST00000568291 IGLV10-54A0A075B6I4 117 aa6.26□□□□□ -1.41
SF3B3-211ENST00000568291 TRBV25-1A0A075B6N4 114 aa6.26□□□□□ -1.41
SF3B3-211ENST00000568291 IGHV1-24A0A0C4DH33 117 aa6.26□□□□□ -1.41
SF3B3-211ENST00000568291 SMR3BP02814 79 aaPredicted RBP6.26□□□□□ -1.41
SF3B3-211ENST00000568291 GCSHP23434 173 aa6.26□□□□□ -1.41
SF3B3-211ENST00000568291 SMIM15Q7Z3B0 74 aa6.26□□□□□ -1.41
SF3B3-211ENST00000568291 AMN1Q8IY45 258 aa6.26□□□□□ -1.41
SF3B3-211ENST00000568291 NUP35Q8NFH5 326 aa6.26□□□□□ -1.41
SF3B3-211ENST00000568291 NAT8Q9UHE5 227 aa6.26□□□□□ -1.41
SF3B3-211ENST00000568291 A0A1B0GUT8 65 aa6.25□□□□□ -1.41
SF3B3-211ENST00000568291 NCR2O95944 276 aa6.25□□□□□ -1.41
SF3B3-211ENST00000568291 RPS10P46783 165 aaKnown RBP6.25□□□□□ -1.41
SF3B3-211ENST00000568291 ELOBQ15370 118 aa6.25□□□□□ -1.41
SF3B3-211ENST00000568291 IQCJQ1A5X6 159 aa6.25□□□□□ -1.41
SF3B3-211ENST00000568291 CT83Q5H943 113 aa6.25□□□□□ -1.41
SF3B3-211ENST00000568291 BORCS7Q96B45 105 aa6.25□□□□□ -1.41
SF3B3-211ENST00000568291 RNF185Q96GF1 192 aa6.25□□□□□ -1.41
SF3B3-211ENST00000568291 TMEM243Q9BU79 118 aa6.25□□□□□ -1.41
SF3B3-211ENST00000568291 FAM30AQ9NZY2 134 aa6.25□□□□□ -1.41
SF3B3-211ENST00000568291 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.24□□□□□ -1.41
SF3B3-211ENST00000568291 IGKV3OR2-268A0A0C4DH90 116 aa6.24□□□□□ -1.41
SF3B3-211ENST00000568291 IGKV2-29A2NJV5 120 aaPredicted RBP6.24□□□□□ -1.41
SF3B3-211ENST00000568291 NDUFS6O75380 124 aaKnown RBP6.24□□□□□ -1.41
SF3B3-211ENST00000568291 HLA-DQA1P01909 254 aa6.24□□□□□ -1.41
SF3B3-211ENST00000568291 CRPP02741 224 aa6.24□□□□□ -1.41
SF3B3-211ENST00000568291 RAB4AP20338 218 aa6.24□□□□□ -1.41
SF3B3-211ENST00000568291 AMTP48728 403 aa6.24□□□□□ -1.41
SF3B3-211ENST00000568291 CAMPP49913 170 aa6.24□□□□□ -1.41
SF3B3-211ENST00000568291 COTL1Q14019 142 aa6.24□□□□□ -1.41
SF3B3-211ENST00000568291 FAM74A3Q4VXF1 159 aa6.24□□□□□ -1.41
SF3B3-211ENST00000568291 C20orf203Q8NBC4 194 aa6.24□□□□□ -1.41
SF3B3-211ENST00000568291 CHCHD7Q9BUK0 85 aa6.24□□□□□ -1.41
SF3B3-211ENST00000568291 C1orf43Q9BWL3 253 aa6.24□□□□□ -1.41
SF3B3-211ENST00000568291 SDHAF1A6NFY7 115 aa6.23□□□□□ -1.41
SF3B3-211ENST00000568291 FAM229AH3BQW9 127 aa6.23□□□□□ -1.41
SF3B3-211ENST00000568291 IFITM2Q01629 132 aa6.23□□□□□ -1.41
SF3B3-211ENST00000568291 TMEM97Q5BJF2 176 aa6.23□□□□□ -1.41
SF3B3-211ENST00000568291 MRPL54Q6P161 138 aaKnown RBP6.23□□□□□ -1.41
SF3B3-211ENST00000568291 NTN5Q8WTR8 489 aaPredicted RBP6.23□□□□□ -1.41
SF3B3-211ENST00000568291 RMI2Q96E14 147 aa6.23□□□□□ -1.41
SF3B3-211ENST00000568291 TMEM70Q9BUB7 260 aa6.23□□□□□ -1.41
SF3B3-211ENST00000568291 TMEM191AQ9H0A3 160 aa6.23□□□□□ -1.41
SF3B3-211ENST00000568291 MYCBP2O75592 4640 aa6.22□□□□□ -1.41
SF3B3-211ENST00000568291 SMIM27A0A1W2PRY6 76 aa6.22□□□□□ -1.41
SF3B3-211ENST00000568291 FAM231BA6NCW3 169 aa6.22□□□□□ -1.41
SF3B3-211ENST00000568291 UBE2L6O14933 153 aa6.22□□□□□ -1.41
SF3B3-211ENST00000568291 PMCHP20382 165 aa6.22□□□□□ -1.41
SF3B3-211ENST00000568291 RAB14P61106 215 aa6.22□□□□□ -1.41
SF3B3-211ENST00000568291 REG3AQ06141 175 aa6.22□□□□□ -1.41
SF3B3-211ENST00000568291 Q0VG73 95 aa6.22□□□□□ -1.41
SF3B3-211ENST00000568291 RIGQ13278 110 aa6.22□□□□□ -1.41
SF3B3-211ENST00000568291 KRTAP26-1Q6PEX3 210 aa6.22□□□□□ -1.41
SF3B3-211ENST00000568291 PRR34Q9NV39 138 aa6.22□□□□□ -1.41
SF3B3-211ENST00000568291 TMEM242Q9NWH2 141 aa6.22□□□□□ -1.41
SF3B3-211ENST00000568291 NAT8BQ9UHF3 227 aa6.22□□□□□ -1.41
SF3B3-211ENST00000568291 USP17L23D6RBM5 183 aa6.21□□□□□ -1.42
SF3B3-211ENST00000568291 RNASEKQ6P5S7 137 aaKnown RBP6.21□□□□□ -1.42
SF3B3-211ENST00000568291 ST20Q9HBF5 79 aa6.21□□□□□ -1.42
SF3B3-211ENST00000568291 COX11Q9Y6N1 276 aa6.21□□□□□ -1.42
SF3B3-211ENST00000568291 SRRM2Q9UQ35 2752 aaKnown RBP6.2□□□□□ -1.42
SF3B3-211ENST00000568291 I3L3M4 83 aa6.2□□□□□ -1.42
SF3B3-211ENST00000568291 TSHBP01222 138 aa6.2□□□□□ -1.42
SF3B3-211ENST00000568291 APCSP02743 223 aa6.2□□□□□ -1.42
SF3B3-211ENST00000568291 PRSS1P07477 247 aa6.2□□□□□ -1.42
SF3B3-211ENST00000568291 MIAQ16674 131 aa6.2□□□□□ -1.42
SF3B3-211ENST00000568291 MRPL51Q4U2R6 128 aaKnown RBP6.2□□□□□ -1.42
SF3B3-211ENST00000568291 AMMECR1LQ6DCA0 310 aa6.2□□□□□ -1.42
SF3B3-211ENST00000568291 SMDT1Q9H4I9 107 aa6.2□□□□□ -1.42
SF3B3-211ENST00000568291 TRBV6-5A0A0K0K1A5 114 aa6.19□□□□□ -1.42
SF3B3-211ENST00000568291 FGF6P10767 208 aa6.19□□□□□ -1.42
SF3B3-211ENST00000568291 POLR2KP53803 58 aaKnown RBP6.19□□□□□ -1.42
SF3B3-211ENST00000568291 PKIAP61925 76 aa6.19□□□□□ -1.42
SF3B3-211ENST00000568291 FAM104BQ5XKR9 115 aa6.19□□□□□ -1.42
SF3B3-211ENST00000568291 NRACQ8N912 160 aa6.19□□□□□ -1.42
SF3B3-211ENST00000568291 MRAP2Q96G30 205 aa6.19□□□□□ -1.42
SF3B3-211ENST00000568291 FAT1Q14517 4588 aa6.19□□□□□ -1.42
SF3B3-211ENST00000568291 A0A1B0GUV1 79 aa6.18□□□□□ -1.42
SF3B3-211ENST00000568291 GAGE12HA6NDE8 117 aa6.18□□□□□ -1.42
SF3B3-211ENST00000568291 CLLU1Q5K131 121 aa6.18□□□□□ -1.42
SF3B3-211ENST00000568291 RNASE13Q5GAN3 156 aaKnown RBP6.17□□□□□ -1.42
SF3B3-211ENST00000568291 A0A1B0GXF2 115 aa6.16□□□□□ -1.42
SF3B3-211ENST00000568291 D6R8Y8 96 aa6.16□□□□□ -1.42
SF3B3-211ENST00000568291 VCYO14598 125 aa6.16□□□□□ -1.42
SF3B3-211ENST00000568291 EIF4EBP3O60516 100 aaPredicted RBP6.16□□□□□ -1.42
SF3B3-211ENST00000568291 PLA2G1BP04054 148 aaKnown RBP6.16□□□□□ -1.42
SF3B3-211ENST00000568291 ESDP10768 282 aa6.16□□□□□ -1.42
SF3B3-211ENST00000568291 FCER1GP30273 86 aa6.16□□□□□ -1.42
SF3B3-211ENST00000568291 CKS2P33552 79 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms