RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 BTF3L4Q96K17 158 aa11.53□□□□□ -0.56
COMMD4-220ENST00000567720 IMMP2LQ96T52 175 aa11.53□□□□□ -0.56
COMMD4-220ENST00000567720 TMEM243Q9BU79 118 aa11.53□□□□□ -0.56
COMMD4-220ENST00000567720 ST20Q9HBF5 79 aa11.53□□□□□ -0.56
COMMD4-220ENST00000567720 KLK12Q9UKR0 248 aa11.53□□□□□ -0.56
COMMD4-220ENST00000567720 C7orf77A4D0Y5 90 aa11.52□□□□□ -0.57
COMMD4-220ENST00000567720 TMEM262E9PQX1 116 aa11.52□□□□□ -0.57
COMMD4-220ENST00000567720 POLR2KP53803 58 aaKnown RBP11.52□□□□□ -0.57
COMMD4-220ENST00000567720 RHEBQ15382 184 aa11.52□□□□□ -0.57
COMMD4-220ENST00000567720 ATRAIDQ6UW56 229 aa11.52□□□□□ -0.57
COMMD4-220ENST00000567720 D6R8Y8 96 aa11.51□□□□□ -0.57
COMMD4-220ENST00000567720 I3L3M4 83 aa11.51□□□□□ -0.57
COMMD4-220ENST00000567720 TSHBP01222 138 aa11.51□□□□□ -0.57
COMMD4-220ENST00000567720 APCSP02743 223 aa11.51□□□□□ -0.57
COMMD4-220ENST00000567720 PKIAP61925 76 aa11.51□□□□□ -0.57
COMMD4-220ENST00000567720 RBX1P62877 108 aa11.51□□□□□ -0.57
COMMD4-220ENST00000567720 TMEM242Q9NWH2 141 aa11.51□□□□□ -0.57
COMMD4-220ENST00000567720 TRBV27A0A0K0K1C4 114 aa11.5□□□□□ -0.57
COMMD4-220ENST00000567720 CKS2P33552 79 aa11.5□□□□□ -0.57
COMMD4-220ENST00000567720 SUMO2P61956 95 aaKnown RBP11.5□□□□□ -0.57
COMMD4-220ENST00000567720 LRP1BQ9NZR2 4599 aa11.49□□□□□ -0.57
COMMD4-220ENST00000567720 NPYP01303 97 aa11.49□□□□□ -0.57
COMMD4-220ENST00000567720 APOC3P02656 99 aa11.49□□□□□ -0.57
COMMD4-220ENST00000567720 UBE2WQ96B02 151 aa11.49□□□□□ -0.57
COMMD4-220ENST00000567720 TRBV24-1A0A075B6N3 115 aa11.48□□□□□ -0.57
COMMD4-220ENST00000567720 TRAV9-1A0A075B6T8 112 aa11.48□□□□□ -0.57
COMMD4-220ENST00000567720 TRAV8-3A0A0A6YYJ7 113 aa11.48□□□□□ -0.57
COMMD4-220ENST00000567720 PPP1R17O96001 155 aa11.48□□□□□ -0.57
COMMD4-220ENST00000567720 ANGP03950 147 aaKnown RBP11.48□□□□□ -0.57
COMMD4-220ENST00000567720 PMCHP20382 165 aa11.48□□□□□ -0.57
COMMD4-220ENST00000567720 ELOBQ15370 118 aa11.48□□□□□ -0.57
COMMD4-220ENST00000567720 C20orf203Q8NBC4 194 aa11.48□□□□□ -0.57
COMMD4-220ENST00000567720 RPS10P5Q9NQ39 176 aa11.48□□□□□ -0.57
COMMD4-220ENST00000567720 IGLV4-60A0A075B6I1 120 aa11.47□□□□□ -0.57
COMMD4-220ENST00000567720 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.47□□□□□ -0.57
COMMD4-220ENST00000567720 IGKV2-29A2NJV5 120 aaPredicted RBP11.47□□□□□ -0.57
COMMD4-220ENST00000567720 UBE2L6O14933 153 aa11.47□□□□□ -0.57
COMMD4-220ENST00000567720 TNFRSF6BO95407 300 aa11.47□□□□□ -0.57
COMMD4-220ENST00000567720 CLPSL2Q6UWE3 100 aa11.47□□□□□ -0.57
COMMD4-220ENST00000567720 ENHOQ6UWT2 76 aa11.47□□□□□ -0.57
COMMD4-220ENST00000567720 A0A087WTM6 91 aa11.46□□□□□ -0.57
COMMD4-220ENST00000567720 PSCAO43653 123 aa11.46□□□□□ -0.57
COMMD4-220ENST00000567720 CRPP02741 224 aa11.46□□□□□ -0.57
COMMD4-220ENST00000567720 PPBPP02775 128 aa11.46□□□□□ -0.57
COMMD4-220ENST00000567720 ESDP10768 282 aa11.46□□□□□ -0.57
COMMD4-220ENST00000567720 NDUFA5Q16718 116 aa11.46□□□□□ -0.57
COMMD4-220ENST00000567720 TMEM136Q6ZRR5 245 aa11.46□□□□□ -0.57
COMMD4-220ENST00000567720 ORMDL3Q8N138 153 aa11.46□□□□□ -0.57
COMMD4-220ENST00000567720 SVBPQ8N300 66 aa11.46□□□□□ -0.57
COMMD4-220ENST00000567720 C20orf78Q9BR46 151 aa11.46□□□□□ -0.57
COMMD4-220ENST00000567720 A0A1B0GUV1 79 aa11.45□□□□□ -0.58
COMMD4-220ENST00000567720 S100PP25815 95 aa11.45□□□□□ -0.58
COMMD4-220ENST00000567720 RPL32P62910 135 aaKnown RBP11.45□□□□□ -0.58
COMMD4-220ENST00000567720 SMIM2Q9BVW6 85 aa11.45□□□□□ -0.58
COMMD4-220ENST00000567720 PRR34Q9NV39 138 aa11.45□□□□□ -0.58
COMMD4-220ENST00000567720 IGKV2D-24A0A075B6R9 120 aa11.44□□□□□ -0.58
COMMD4-220ENST00000567720 LRCOL1A6NCL2 159 aa11.44□□□□□ -0.58
COMMD4-220ENST00000567720 VCYO14598 125 aa11.44□□□□□ -0.58
COMMD4-220ENST00000567720 PHOX2AO14813 284 aa11.44□□□□□ -0.58
COMMD4-220ENST00000567720 KRTAP10-2P60368 255 aa11.44□□□□□ -0.58
COMMD4-220ENST00000567720 SLC7A5P1Q8MH63 180 aa11.44□□□□□ -0.58
COMMD4-220ENST00000567720 LINC00269Q8N2A0 174 aa11.44□□□□□ -0.58
COMMD4-220ENST00000567720 PRELID3AQ96N28 172 aa11.44□□□□□ -0.58
COMMD4-220ENST00000567720 KIAA1109Q2LD37 5005 aa11.44□□□□□ -0.58
COMMD4-220ENST00000567720 SNAPINO95295 136 aa11.43□□□□□ -0.58
COMMD4-220ENST00000567720 Q0VG73 95 aa11.43□□□□□ -0.58
COMMD4-220ENST00000567720 WFDC2Q14508 124 aa11.43□□□□□ -0.58
COMMD4-220ENST00000567720 SPATA12Q7Z6I5 190 aa11.43□□□□□ -0.58
COMMD4-220ENST00000567720 MAPKAPK5-AS1Q8N8E1 139 aa11.43□□□□□ -0.58
COMMD4-220ENST00000567720 TM2D2Q9BX73 214 aa11.43□□□□□ -0.58
COMMD4-220ENST00000567720 H7C423 109 aa11.42□□□□□ -0.58
COMMD4-220ENST00000567720 FGF6P10767 208 aa11.42□□□□□ -0.58
COMMD4-220ENST00000567720 FCER1GP30273 86 aa11.42□□□□□ -0.58
COMMD4-220ENST00000567720 RMI2Q96E14 147 aa11.42□□□□□ -0.58
COMMD4-220ENST00000567720 KIR2DL4Q99706 377 aa11.42□□□□□ -0.58
COMMD4-220ENST00000567720 REG3AQ06141 175 aa11.41□□□□□ -0.58
COMMD4-220ENST00000567720 MIAQ16674 131 aa11.41□□□□□ -0.58
COMMD4-220ENST00000567720 AMMECR1LQ6DCA0 310 aa11.41□□□□□ -0.58
COMMD4-220ENST00000567720 C1orf43Q9BWL3 253 aa11.41□□□□□ -0.58
COMMD4-220ENST00000567720 APOBP04114 4563 aaKnown RBP11.41□□□□□ -0.58
COMMD4-220ENST00000567720 HLA-DQA1P01909 254 aa11.4□□□□□ -0.58
COMMD4-220ENST00000567720 FUSP35637 526 aaKnown RBP eCLIP11.4□□□□□ -0.58
COMMD4-220ENST00000567720 RNASEKQ6P5S7 137 aaKnown RBP11.4□□□□□ -0.58
COMMD4-220ENST00000567720 LAMTOR2Q9Y2Q5 125 aa11.4□□□□□ -0.58
COMMD4-220ENST00000567720 COX11Q9Y6N1 276 aa11.4□□□□□ -0.58
COMMD4-220ENST00000567720 LECT2O14960 151 aa11.39□□□□□ -0.59
COMMD4-220ENST00000567720 ZNF25P17030 456 aaPredicted RBP11.39□□□□□ -0.59
COMMD4-220ENST00000567720 KRTAP26-1Q6PEX3 210 aa11.39□□□□□ -0.59
COMMD4-220ENST00000567720 MRPL52Q86TS9 123 aaKnown RBP11.39□□□□□ -0.59
COMMD4-220ENST00000567720 IGLV10-54A0A075B6I4 117 aa11.38□□□□□ -0.59
COMMD4-220ENST00000567720 TGIF2-C20orf24A0A0A6YYL0 155 aa11.38□□□□□ -0.59
COMMD4-220ENST00000567720 EREGO14944 169 aa11.38□□□□□ -0.59
COMMD4-220ENST00000567720 KIAA1644Q3SXP7 199 aa11.38□□□□□ -0.59
COMMD4-220ENST00000567720 GNB1LQ9BYB4 327 aa11.38□□□□□ -0.59
COMMD4-220ENST00000567720 MAP1LC3AQ9H492 121 aa11.38□□□□□ -0.59
COMMD4-220ENST00000567720 C16orf90A8MZG2 172 aa11.37□□□□□ -0.59
COMMD4-220ENST00000567720 TCAPO15273 167 aa11.37□□□□□ -0.59
COMMD4-220ENST00000567720 Q8N814 137 aa11.37□□□□□ -0.59
COMMD4-220ENST00000567720 BAALCQ8WXS3 180 aa11.37□□□□□ -0.59
COMMD4-220ENST00000567720 PRSS47A8MTI9 375 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms