RNA–Protein interactions for RNA: ENST00000567329.1

USP7-217, Transcript of ubiquitin specific peptidase 7, human

TSL 4

Gene USP7, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP7-217	ENST00000567329	TRPT1	Q86TN4	253 aa	Known RBP	5.19	□□□□□ -1.58
USP7-217	ENST00000567329	ZFAND2A	Q8N6M9	145 aa		5.19	□□□□□ -1.58
USP7-217	ENST00000567329	YAE1D1	Q9NRH1	226 aa		5.19	□□□□□ -1.58
USP7-217	ENST00000567329	VPREB3	Q9UKI3	123 aa		5.19	□□□□□ -1.58
USP7-217	ENST00000567329	PHLDA3	Q9Y5J5	127 aa		5.19	□□□□□ -1.58
USP7-217	ENST00000567329	IGHV7-81	A0A0B4J1V7	117 aa		5.18	□□□□□ -1.58
USP7-217	ENST00000567329		H7C423	109 aa		5.18	□□□□□ -1.58
USP7-217	ENST00000567329	LST1	O00453	97 aa		5.18	□□□□□ -1.58
USP7-217	ENST00000567329	UQCRQ	O14949	82 aa		5.18	□□□□□ -1.58
USP7-217	ENST00000567329	COX7A1	P24310	79 aa		5.18	□□□□□ -1.58
USP7-217	ENST00000567329	S100A4	P26447	101 aa	Known RBP	5.18	□□□□□ -1.58
USP7-217	ENST00000567329	RNASE4	P34096	147 aa	Known RBP	5.18	□□□□□ -1.58
USP7-217	ENST00000567329	BSPH1	Q075Z2	132 aa		5.18	□□□□□ -1.58
USP7-217	ENST00000567329	LINC00643	Q86TS7	51 aa		5.18	□□□□□ -1.58
USP7-217	ENST00000567329	C3orf22	Q8N5N4	141 aa		5.18	□□□□□ -1.58
USP7-217	ENST00000567329	ZNRF2	Q8NHG8	242 aa		5.18	□□□□□ -1.58
USP7-217	ENST00000567329	EEF1AKMT3	Q96AZ1	226 aa		5.18	□□□□□ -1.58
USP7-217	ENST00000567329	RPL39L	Q96EH5	51 aa	Known RBP	5.18	□□□□□ -1.58
USP7-217	ENST00000567329	LINC00526	Q96FQ7	95 aa		5.18	□□□□□ -1.58
USP7-217	ENST00000567329	KRTAP9-2	Q9BYQ4	174 aa		5.18	□□□□□ -1.58
USP7-217	ENST00000567329	KLK15	Q9H2R5	256 aa		5.18	□□□□□ -1.58
USP7-217	ENST00000567329	DYNLRB1	Q9NP97	96 aa		5.18	□□□□□ -1.58
USP7-217	ENST00000567329	TP53TG1	Q9Y2A0	90 aa		5.18	□□□□□ -1.58
USP7-217	ENST00000567329	PYGO1	Q9Y3Y4	419 aa		5.18	□□□□□ -1.58
USP7-217	ENST00000567329	MALRD1	Q5VYJ5	2156 aa		5.18	□□□□□ -1.58
USP7-217	ENST00000567329	PLXNB1	O43157	2135 aa		5.17	□□□□□ -1.58
USP7-217	ENST00000567329		E7EQL1	145 aa		5.17	□□□□□ -1.58
USP7-217	ENST00000567329	ZNF22	P17026	224 aa	Predicted RBP	5.17	□□□□□ -1.58
USP7-217	ENST00000567329	NDP	Q00604	133 aa		5.17	□□□□□ -1.58
USP7-217	ENST00000567329	C5orf47	Q569G3	176 aa		5.17	□□□□□ -1.58
USP7-217	ENST00000567329		Q6ZQT7	251 aa		5.17	□□□□□ -1.58
USP7-217	ENST00000567329	RNF182	Q8N6D2	247 aa		5.17	□□□□□ -1.58
USP7-217	ENST00000567329	C14orf178	Q8N769	122 aa	Predicted RBP	5.17	□□□□□ -1.58
USP7-217	ENST00000567329	EDA2R	Q9HAV5	297 aa		5.17	□□□□□ -1.58
USP7-217	ENST00000567329	ICOS	Q9Y6W8	199 aa		5.17	□□□□□ -1.58
USP7-217	ENST00000567329	PRRC2A	P48634	2157 aa	Known RBP	5.16	□□□□□ -1.58
USP7-217	ENST00000567329	POLE	Q07864	2286 aa		5.16	□□□□□ -1.58
USP7-217	ENST00000567329	TEX49	A0A1B0GTD5	131 aa		5.16	□□□□□ -1.58
USP7-217	ENST00000567329	SOCS3	O14543	225 aa		5.16	□□□□□ -1.58
USP7-217	ENST00000567329	RNASE3	P12724	160 aa	Known RBP	5.16	□□□□□ -1.58
USP7-217	ENST00000567329	CFHR3	Q02985	330 aa		5.16	□□□□□ -1.58
USP7-217	ENST00000567329	ANXA2R	Q3ZCQ2	193 aa		5.16	□□□□□ -1.58
USP7-217	ENST00000567329	LCE4A	Q5TA78	99 aa		5.16	□□□□□ -1.58
USP7-217	ENST00000567329	SFTA2	Q6UW10	78 aa		5.16	□□□□□ -1.58
USP7-217	ENST00000567329	C5orf38	Q86SI9	138 aa		5.16	□□□□□ -1.58
USP7-217	ENST00000567329		Q8N9W7	124 aa		5.16	□□□□□ -1.58
USP7-217	ENST00000567329	LITAF	Q99732	161 aa		5.16	□□□□□ -1.58
USP7-217	ENST00000567329	PKDREJ	Q9NTG1	2253 aa		5.16	□□□□□ -1.58
USP7-217	ENST00000567329	KRTAP9-6	A0A140TA67	174 aa		5.15	□□□□□ -1.59
USP7-217	ENST00000567329	KRTAP9-7	A8MTY7	169 aa		5.15	□□□□□ -1.59
USP7-217	ENST00000567329	PRY	O14603	147 aa		5.15	□□□□□ -1.59
USP7-217	ENST00000567329	NDUFA7	O95182	113 aa		5.15	□□□□□ -1.59
USP7-217	ENST00000567329	MGP	P08493	103 aa		5.15	□□□□□ -1.59
USP7-217	ENST00000567329	ZNF56	Q15929	161 aa		5.15	□□□□□ -1.59
USP7-217	ENST00000567329	C15orf32	Q32M92	178 aa		5.15	□□□□□ -1.59
USP7-217	ENST00000567329	PRR9	Q5T870	116 aa		5.15	□□□□□ -1.59
USP7-217	ENST00000567329	DAND5	Q8N907	189 aa		5.15	□□□□□ -1.59
USP7-217	ENST00000567329	C20orf203	Q8NBC4	194 aa		5.15	□□□□□ -1.59
USP7-217	ENST00000567329	DCANP1	Q8TF63	244 aa		5.15	□□□□□ -1.59
USP7-217	ENST00000567329	COPS9	Q8WXC6	57 aa		5.15	□□□□□ -1.59
USP7-217	ENST00000567329	CITED2	Q99967	270 aa	Predicted RBP	5.15	□□□□□ -1.59
USP7-217	ENST00000567329	SPX	Q9BT56	116 aa		5.15	□□□□□ -1.59
USP7-217	ENST00000567329		S4R3C0	116 aa		5.15	□□□□□ -1.59
USP7-217	ENST00000567329	ZNF469	Q96JG9	3925 aa	Predicted RBP	5.15	□□□□□ -1.59
USP7-217	ENST00000567329	ARFGEF3	Q5TH69	2177 aa		5.15	□□□□□ -1.59
USP7-217	ENST00000567329	RP1L1	Q8IWN7	2480 aa	Predicted RBP	5.14	□□□□□ -1.59
USP7-217	ENST00000567329	IGHV1-58	A0A0C4DH39	117 aa		5.14	□□□□□ -1.59
USP7-217	ENST00000567329	FAM223B	A6NKX1	122 aa		5.14	□□□□□ -1.59
USP7-217	ENST00000567329	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.14	□□□□□ -1.59
USP7-217	ENST00000567329	KLLN	B2CW77	178 aa		5.14	□□□□□ -1.59
USP7-217	ENST00000567329	IGHV4-39	P01824	125 aa		5.14	□□□□□ -1.59
USP7-217	ENST00000567329	PRB4	P10163	310 aa	Predicted RBP	5.14	□□□□□ -1.59
USP7-217	ENST00000567329	CRYGA	P11844	174 aa		5.14	□□□□□ -1.59
USP7-217	ENST00000567329	MRPS36	P82909	103 aa	Known RBP	5.14	□□□□□ -1.59
USP7-217	ENST00000567329	MIA	Q16674	131 aa		5.14	□□□□□ -1.59
USP7-217	ENST00000567329		Q1RN00	199 aa		5.14	□□□□□ -1.59
USP7-217	ENST00000567329	SUMO4	Q6EEV6	95 aa		5.14	□□□□□ -1.59
USP7-217	ENST00000567329	VMO1	Q7Z5L0	202 aa		5.14	□□□□□ -1.59
USP7-217	ENST00000567329	FAM223A	Q8IWN6	122 aa		5.14	□□□□□ -1.59
USP7-217	ENST00000567329	WFDC11	Q8NEX6	87 aa		5.14	□□□□□ -1.59
USP7-217	ENST00000567329	SPATA3	Q8NHX4	192 aa		5.14	□□□□□ -1.59
USP7-217	ENST00000567329	PEMT	Q9UBM1	199 aa		5.14	□□□□□ -1.59
USP7-217	ENST00000567329	ZNF256	Q9Y2P7	627 aa	Predicted RBP	5.14	□□□□□ -1.59
USP7-217	ENST00000567329	DCHS2	Q6V1P9	2916 aa		5.13	□□□□□ -1.59
USP7-217	ENST00000567329		J3KT08	172 aa		5.13	□□□□□ -1.59
USP7-217	ENST00000567329	NDUFA4	O00483	81 aa		5.13	□□□□□ -1.59
USP7-217	ENST00000567329	IGHV3-23	P01764	117 aa		5.13	□□□□□ -1.59
USP7-217	ENST00000567329	COX7C	P15954	63 aa		5.13	□□□□□ -1.59
USP7-217	ENST00000567329	UBE2E1	P51965	193 aa		5.13	□□□□□ -1.59
USP7-217	ENST00000567329	FAM222A	Q5U5X8	452 aa		5.13	□□□□□ -1.59
USP7-217	ENST00000567329	C9orf85	Q96MD7	179 aa		5.13	□□□□□ -1.59
USP7-217	ENST00000567329	CSDC2	Q9Y534	153 aa	Known RBP	5.13	□□□□□ -1.59
USP7-217	ENST00000567329	CCDC168	Q8NDH2	2452 aa		5.13	□□□□□ -1.59
USP7-217	ENST00000567329	IGLV4-3	A0A075B6K6	122 aa		5.12	□□□□□ -1.59
USP7-217	ENST00000567329	TINCR	A0A1B0GVN0	87 aa		5.12	□□□□□ -1.59
USP7-217	ENST00000567329		H3BUA1	57 aa		5.12	□□□□□ -1.59
USP7-217	ENST00000567329		I3L3M4	83 aa		5.12	□□□□□ -1.59
USP7-217	ENST00000567329		M0QY20	66 aa		5.12	□□□□□ -1.59
USP7-217	ENST00000567329	NPFF	O15130	113 aa		5.12	□□□□□ -1.59
USP7-217	ENST00000567329	GNRH2	O43555	120 aa		5.12	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 183.7 ms