RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 FOXA3P55318 350 aaPredicted RBP9.27□□□□□ -0.93
COMMD4-216ENST00000567023 RBX1P62877 108 aa9.27□□□□□ -0.93
COMMD4-216ENST00000567023 TMEM241Q24JQ0 296 aa9.27□□□□□ -0.93
COMMD4-216ENST00000567023 TRGC1P0CF51 173 aa9.26□□□□□ -0.93
COMMD4-216ENST00000567023 RAB14P61106 215 aa9.26□□□□□ -0.93
COMMD4-216ENST00000567023 RPL23P62829 140 aaKnown RBP9.26□□□□□ -0.93
COMMD4-216ENST00000567023 SUMO4Q6EEV6 95 aa9.26□□□□□ -0.93
COMMD4-216ENST00000567023 KRTAP26-1Q6PEX3 210 aa9.26□□□□□ -0.93
COMMD4-216ENST00000567023 ISOC2Q96AB3 205 aa9.26□□□□□ -0.93
COMMD4-216ENST00000567023 IGHV1-24A0A0C4DH33 117 aa9.25□□□□□ -0.93
COMMD4-216ENST00000567023 USP17L23D6RBM5 183 aa9.25□□□□□ -0.93
COMMD4-216ENST00000567023 MGPP08493 103 aa9.25□□□□□ -0.93
COMMD4-216ENST00000567023 IFITM2Q01629 132 aa9.25□□□□□ -0.93
COMMD4-216ENST00000567023 CLLU1Q5K131 121 aa9.25□□□□□ -0.93
COMMD4-216ENST00000567023 DGAT2L7PQ6IED9 249 aa9.25□□□□□ -0.93
COMMD4-216ENST00000567023 RASL11AQ6T310 242 aa9.25□□□□□ -0.93
COMMD4-216ENST00000567023 LINC00269Q8N2A0 174 aa9.25□□□□□ -0.93
COMMD4-216ENST00000567023 CIRBP-AS1Q8TBR5 109 aa9.25□□□□□ -0.93
COMMD4-216ENST00000567023 DEFB104AQ8WTQ1 72 aa9.25□□□□□ -0.93
COMMD4-216ENST00000567023 TSKUQ8WUA8 353 aa9.25□□□□□ -0.93
COMMD4-216ENST00000567023 GFRA4Q9GZZ7 299 aa9.25□□□□□ -0.93
COMMD4-216ENST00000567023 NAT8Q9UHE5 227 aa9.25□□□□□ -0.93
COMMD4-216ENST00000567023 A0A1B0GUV1 79 aa9.24□□□□□ -0.93
COMMD4-216ENST00000567023 FAM231BA6NCW3 169 aa9.24□□□□□ -0.93
COMMD4-216ENST00000567023 GAGE6Q13070 117 aa9.24□□□□□ -0.93
COMMD4-216ENST00000567023 PGLYRP4Q96LB8 373 aa9.24□□□□□ -0.93
COMMD4-216ENST00000567023 DPH3P1Q9H4G8 78 aa9.24□□□□□ -0.93
COMMD4-216ENST00000567023 NIT2Q9NQR4 276 aa9.24□□□□□ -0.93
COMMD4-216ENST00000567023 V9GYV3 84 aa9.24□□□□□ -0.93
COMMD4-216ENST00000567023 PRSS1P07477 247 aa9.23□□□□□ -0.93
COMMD4-216ENST00000567023 KRTAP10-4P60372 401 aaPredicted RBP9.23□□□□□ -0.93
COMMD4-216ENST00000567023 TWIST1Q15672 202 aa9.23□□□□□ -0.93
COMMD4-216ENST00000567023 KRTAP29-1A8MX34 341 aaPredicted RBP9.22□□□□□ -0.93
COMMD4-216ENST00000567023 HLA-DQA1P01909 254 aa9.22□□□□□ -0.93
COMMD4-216ENST00000567023 REG3AQ06141 175 aa9.22□□□□□ -0.93
COMMD4-216ENST00000567023 ADIRFQ15847 76 aa9.22□□□□□ -0.93
COMMD4-216ENST00000567023 C9orf163Q8N9P6 203 aa9.22□□□□□ -0.93
COMMD4-216ENST00000567023 C20orf203Q8NBC4 194 aa9.22□□□□□ -0.93
COMMD4-216ENST00000567023 LRP1Q07954 4544 aaKnown RBP9.22□□□□□ -0.93
COMMD4-216ENST00000567023 TRAV8-4A0A0B4J246 113 aa9.21□□□□□ -0.94
COMMD4-216ENST00000567023 HIGD1CA8MV81 97 aa9.21□□□□□ -0.94
COMMD4-216ENST00000567023 CLPSL2Q6UWE3 100 aa9.21□□□□□ -0.94
COMMD4-216ENST00000567023 CLRN3Q8NCR9 226 aa9.21□□□□□ -0.94
COMMD4-216ENST00000567023 TMEM243Q9BU79 118 aa9.21□□□□□ -0.94
COMMD4-216ENST00000567023 A0A1B0GUT8 65 aa9.2□□□□□ -0.94
COMMD4-216ENST00000567023 IGLV4-60A0A075B6I1 120 aa9.19□□□□□ -0.94
COMMD4-216ENST00000567023 J3QL48 77 aa9.19□□□□□ -0.94
COMMD4-216ENST00000567023 FAT3Q8TDW7 4589 aa9.19□□□□□ -0.94
COMMD4-216ENST00000567023 SMIM27A0A1W2PRY6 76 aa9.18□□□□□ -0.94
COMMD4-216ENST00000567023 SMIM15Q7Z3B0 74 aa9.18□□□□□ -0.94
COMMD4-216ENST00000567023 GATD1Q8NB37 220 aa9.18□□□□□ -0.94
COMMD4-216ENST00000567023 NUP35Q8NFH5 326 aa9.18□□□□□ -0.94
COMMD4-216ENST00000567023 IGLV10-54A0A075B6I4 117 aa9.17□□□□□ -0.94
COMMD4-216ENST00000567023 CNBPP62633 177 aaKnown RBP9.17□□□□□ -0.94
COMMD4-216ENST00000567023 COTL1Q14019 142 aa9.17□□□□□ -0.94
COMMD4-216ENST00000567023 SDIM1Q6ZPB5 146 aa9.17□□□□□ -0.94
COMMD4-216ENST00000567023 BORCS7Q96B45 105 aa9.17□□□□□ -0.94
COMMD4-216ENST00000567023 TMEM191AQ9H0A3 160 aa9.17□□□□□ -0.94
COMMD4-216ENST00000567023 NAT8BQ9UHF3 227 aa9.17□□□□□ -0.94
COMMD4-216ENST00000567023 PKHD1L1Q86WI1 4243 aa9.16□□□□□ -0.94
COMMD4-216ENST00000567023 TRAV26-2A0A0B4J265 109 aa9.15□□□□□ -0.94
COMMD4-216ENST00000567023 UBE2L6O14933 153 aa9.15□□□□□ -0.94
COMMD4-216ENST00000567023 AMTP48728 403 aa9.15□□□□□ -0.94
COMMD4-216ENST00000567023 PNRC1Q12796 327 aaPredicted RBP9.15□□□□□ -0.94
COMMD4-216ENST00000567023 RIGQ13278 110 aa9.15□□□□□ -0.94
COMMD4-216ENST00000567023 UQCC3Q6UW78 93 aa9.15□□□□□ -0.94
COMMD4-216ENST00000567023 NCR2O95944 276 aa9.14□□□□□ -0.95
COMMD4-216ENST00000567023 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.14□□□□□ -0.95
COMMD4-216ENST00000567023 hDV102S1A0JD36 115 aa9.13□□□□□ -0.95
COMMD4-216ENST00000567023 H7C423 109 aa9.13□□□□□ -0.95
COMMD4-216ENST00000567023 OXTP01178 125 aa9.13□□□□□ -0.95
COMMD4-216ENST00000567023 CIRBPQ14011 172 aaKnown RBP9.13□□□□□ -0.95
COMMD4-216ENST00000567023 RPL39LQ96EH5 51 aaKnown RBP9.13□□□□□ -0.95
COMMD4-216ENST00000567023 RNF185Q96GF1 192 aa9.13□□□□□ -0.95
COMMD4-216ENST00000567023 TRBV6-5A0A0K0K1A5 114 aa9.12□□□□□ -0.95
COMMD4-216ENST00000567023 PANO1I0J062 215 aa9.12□□□□□ -0.95
COMMD4-216ENST00000567023 PPP1R2P9O14990 202 aa9.12□□□□□ -0.95
COMMD4-216ENST00000567023 SLPIP03973 132 aa9.12□□□□□ -0.95
COMMD4-216ENST00000567023 RAB4AP20338 218 aa9.12□□□□□ -0.95
COMMD4-216ENST00000567023 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.11□□□□□ -0.95
COMMD4-216ENST00000567023 A0A1B0GW15 77 aa9.11□□□□□ -0.95
COMMD4-216ENST00000567023 TMEM218A2RU14 115 aa9.11□□□□□ -0.95
COMMD4-216ENST00000567023 ADCYAP1P18509 176 aa9.11□□□□□ -0.95
COMMD4-216ENST00000567023 RPL37AP61513 92 aaKnown RBP9.11□□□□□ -0.95
COMMD4-216ENST00000567023 AMN1Q8IY45 258 aa9.11□□□□□ -0.95
COMMD4-216ENST00000567023 MRAP2Q96G30 205 aa9.11□□□□□ -0.95
COMMD4-216ENST00000567023 AP5S1Q9NUS5 200 aa9.11□□□□□ -0.95
COMMD4-216ENST00000567023 IGHV3-64A0A075B6Q5 118 aa9.1□□□□□ -0.95
COMMD4-216ENST00000567023 A0A1B0GXF2 115 aa9.1□□□□□ -0.95
COMMD4-216ENST00000567023 SDHAF1A6NFY7 115 aa9.1□□□□□ -0.95
COMMD4-216ENST00000567023 GAS8-AS1O95177 125 aa9.1□□□□□ -0.95
COMMD4-216ENST00000567023 LINC00862A6NCI5 91 aa9.09□□□□□ -0.95
COMMD4-216ENST00000567023 APCSP02743 223 aa9.09□□□□□ -0.95
COMMD4-216ENST00000567023 MT-ND4LP03901 98 aa9.09□□□□□ -0.95
COMMD4-216ENST00000567023 FAM104BQ5XKR9 115 aa9.09□□□□□ -0.95
COMMD4-216ENST00000567023 CFAP161Q6P656 301 aa9.09□□□□□ -0.95
COMMD4-216ENST00000567023 C15orf56Q8N910 161 aa9.09□□□□□ -0.95
COMMD4-216ENST00000567023 ANAPC16Q96DE5 110 aa9.09□□□□□ -0.95
COMMD4-216ENST00000567023 GAGE12HA6NDE8 117 aa9.08□□□□□ -0.96
COMMD4-216ENST00000567023 I3L3M4 83 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms