RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 SPTBN2O15020 2390 aa3.28□□□□□ -1.88
LPCAT2-208ENST00000566915 M0QXV9 152 aa3.28□□□□□ -1.88
LPCAT2-208ENST00000566915 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.28□□□□□ -1.882e-6■■□□□ 13.9
LPCAT2-208ENST00000566915 BLCAPP62952 87 aa3.28□□□□□ -1.88
LPCAT2-208ENST00000566915 CITED2Q99967 270 aaPredicted RBP3.28□□□□□ -1.88
LPCAT2-208ENST00000566915 FAM208BQ5VWN6 2430 aa3.28□□□□□ -1.88
LPCAT2-208ENST00000566915 DYSFO75923 2080 aa3.28□□□□□ -1.88
LPCAT2-208ENST00000566915 IGLV4-3A0A075B6K6 122 aa3.28□□□□□ -1.89
LPCAT2-208ENST00000566915 C19orf84I3L1E1 186 aa3.28□□□□□ -1.89
LPCAT2-208ENST00000566915 V9GYY9 64 aa3.28□□□□□ -1.89
LPCAT2-208ENST00000566915 IGKV3D-7A0A0C4DH55 119 aa3.27□□□□□ -1.89
LPCAT2-208ENST00000566915 M0QY20 66 aa3.27□□□□□ -1.89
LPCAT2-208ENST00000566915 BRI3O95415 125 aa3.27□□□□□ -1.89
LPCAT2-208ENST00000566915 LY6G6DO95868 133 aa3.27□□□□□ -1.89
LPCAT2-208ENST00000566915 IGHV4-38-2P0DP08 117 aa3.27□□□□□ -1.89
LPCAT2-208ENST00000566915 CRIP1P50238 77 aa3.27□□□□□ -1.89
LPCAT2-208ENST00000566915 SPAG11BQ08648 103 aa3.27□□□□□ -1.89
LPCAT2-208ENST00000566915 ZFAND2AQ8N6M9 145 aa3.27□□□□□ -1.89
LPCAT2-208ENST00000566915 LINC00308Q8TCZ7 52 aa3.27□□□□□ -1.89
LPCAT2-208ENST00000566915 CLEC2BQ92478 149 aa3.27□□□□□ -1.89
LPCAT2-208ENST00000566915 RNF183Q96D59 192 aa3.27□□□□□ -1.89
LPCAT2-208ENST00000566915 CLUHP3Q96NS8 147 aa3.27□□□□□ -1.89
LPCAT2-208ENST00000566915 ABCA4P78363 2273 aa3.27□□□□□ -1.89
LPCAT2-208ENST00000566915 TRBV6-4A0A1B0GX49 114 aa3.27□□□□□ -1.89
LPCAT2-208ENST00000566915 LYRM9A8MSI8 78 aa3.27□□□□□ -1.89
LPCAT2-208ENST00000566915 LST1O00453 97 aa3.27□□□□□ -1.89
LPCAT2-208ENST00000566915 IGHV3-30P01768 117 aa3.27□□□□□ -1.89
LPCAT2-208ENST00000566915 IGHV3-30-5P0DP03 117 aa3.27□□□□□ -1.89
LPCAT2-208ENST00000566915 COX7BP24311 80 aa3.27□□□□□ -1.89
LPCAT2-208ENST00000566915 SLURP1P55000 103 aa3.27□□□□□ -1.89
LPCAT2-208ENST00000566915 C5orf47Q569G3 176 aa3.27□□□□□ -1.89
LPCAT2-208ENST00000566915 ZGRF1Q86YA3 2104 aa3.27□□□□□ -1.89
LPCAT2-208ENST00000566915 NRACQ8N912 160 aa3.27□□□□□ -1.89
LPCAT2-208ENST00000566915 MRAPQ8TCY5 172 aa3.27□□□□□ -1.89
LPCAT2-208ENST00000566915 TRBV12-3P01733 135 aa3.27□□□□□ -1.89
LPCAT2-208ENST00000566915 ZFP36P26651 326 aaKnown RBP3.27□□□□□ -1.89
LPCAT2-208ENST00000566915 POLR2KP53803 58 aaKnown RBP3.27□□□□□ -1.89
LPCAT2-208ENST00000566915 LMO4P61968 165 aa3.27□□□□□ -1.89
LPCAT2-208ENST00000566915 Q8N6K4 173 aa3.27□□□□□ -1.89
LPCAT2-208ENST00000566915 MT-ATP8P03928 68 aa3.27□□□□□ -1.89
LPCAT2-208ENST00000566915 SERP2Q8N6R1 65 aa3.27□□□□□ -1.89
LPCAT2-208ENST00000566915 DOPEY2Q9Y3R5 2298 aa3.26□□□□□ -1.89
LPCAT2-208ENST00000566915 IGKV2D-24A0A075B6R9 120 aa3.26□□□□□ -1.89
LPCAT2-208ENST00000566915 RS1O15537 224 aa3.26□□□□□ -1.89
LPCAT2-208ENST00000566915 CCL18P55774 89 aa3.26□□□□□ -1.89
LPCAT2-208ENST00000566915 PTH2Q96A98 100 aa3.26□□□□□ -1.89
LPCAT2-208ENST00000566915 MAP6D1Q9H9H5 199 aa3.26□□□□□ -1.89
LPCAT2-208ENST00000566915 IGHV4-30-2A0A087WSY4 118 aa3.26□□□□□ -1.89
LPCAT2-208ENST00000566915 KLLNB2CW77 178 aa3.26□□□□□ -1.89
LPCAT2-208ENST00000566915 UNQ9165/PRO28630Q6UXU0 137 aa3.26□□□□□ -1.89
LPCAT2-208ENST00000566915 ZNF580Q9UK33 172 aa3.26□□□□□ -1.89
LPCAT2-208ENST00000566915 FREM1Q5H8C1 2179 aa3.26□□□□□ -1.89
LPCAT2-208ENST00000566915 IGKV2D-26A0A0A0MRZ7 120 aa3.26□□□□□ -1.89
LPCAT2-208ENST00000566915 FAM236DA0A1B0GTK5 79 aa3.26□□□□□ -1.89
LPCAT2-208ENST00000566915 FAM236CP0DP71 79 aa3.26□□□□□ -1.89
LPCAT2-208ENST00000566915 UBE2BP63146 152 aa3.26□□□□□ -1.89
LPCAT2-208ENST00000566915 LRP4O75096 1905 aa3.26□□□□□ -1.89
LPCAT2-208ENST00000566915 TRIAP1O43715 76 aa3.26□□□□□ -1.89
LPCAT2-208ENST00000566915 C14orf177Q52M58 125 aa3.26□□□□□ -1.89
LPCAT2-208ENST00000566915 APRG1Q8IVJ8 170 aa3.26□□□□□ -1.89
LPCAT2-208ENST00000566915 MAPKAPK5-AS1Q8N8E1 139 aa3.26□□□□□ -1.89
LPCAT2-208ENST00000566915 Q8N976 141 aa3.26□□□□□ -1.89
LPCAT2-208ENST00000566915 IL17DQ8TAD2 202 aa3.26□□□□□ -1.89
LPCAT2-208ENST00000566915 PCNX1Q96RV3 2341 aa3.25□□□□□ -1.89
LPCAT2-208ENST00000566915 COL6A6A6NMZ7 2263 aa3.25□□□□□ -1.89
LPCAT2-208ENST00000566915 COX17Q14061 63 aa3.25□□□□□ -1.89
LPCAT2-208ENST00000566915 UPK3BQ9BT76 320 aa3.25□□□□□ -1.89
LPCAT2-208ENST00000566915 TEX49A0A1B0GTD5 131 aa3.25□□□□□ -1.89
LPCAT2-208ENST00000566915 BPY2O14599 106 aa3.25□□□□□ -1.89
LPCAT2-208ENST00000566915 NDUFA7O95182 113 aa3.25□□□□□ -1.89
LPCAT2-208ENST00000566915 COX7CP15954 63 aa3.25□□□□□ -1.89
LPCAT2-208ENST00000566915 C1orf229Q6ZS94 237 aaPredicted RBP3.25□□□□□ -1.89
LPCAT2-208ENST00000566915 WFDC11Q8NEX6 87 aa3.25□□□□□ -1.89
LPCAT2-208ENST00000566915 C9orf85Q96MD7 179 aa3.25□□□□□ -1.89
LPCAT2-208ENST00000566915 CDKN2A-AS1Q9UH64 79 aa3.25□□□□□ -1.89
LPCAT2-208ENST00000566915 ACACBO00763 2458 aa3.25□□□□□ -1.89
LPCAT2-208ENST00000566915 BPTFQ12830 3046 aa3.25□□□□□ -1.89
LPCAT2-208ENST00000566915 EML5Q05BV3 1969 aa3.25□□□□□ -1.89
LPCAT2-208ENST00000566915 LINC00310P59036 64 aa3.25□□□□□ -1.89
LPCAT2-208ENST00000566915 RPL18AQ02543 176 aaKnown RBP3.25□□□□□ -1.89
LPCAT2-208ENST00000566915 Q6JHZ5 121 aa3.25□□□□□ -1.89
LPCAT2-208ENST00000566915 SMAD5-AS1Q9Y6J3 95 aa3.25□□□□□ -1.89
LPCAT2-208ENST00000566915 PLCE1Q9P212 2302 aa3.25□□□□□ -1.89
LPCAT2-208ENST00000566915 CLPSL1A2RUU4 121 aa3.25□□□□□ -1.89
LPCAT2-208ENST00000566915 NDUFC2-KCTD14E9PQ53 114 aa3.25□□□□□ -1.89
LPCAT2-208ENST00000566915 IGHV4-31P0DP07 118 aa3.25□□□□□ -1.89
LPCAT2-208ENST00000566915 DEFB121Q5J5C9 76 aa3.25□□□□□ -1.89
LPCAT2-208ENST00000566915 Q6ZQT7 251 aa3.25□□□□□ -1.89
LPCAT2-208ENST00000566915 MED12LQ86YW9 2145 aa3.24□□□□□ -1.89
LPCAT2-208ENST00000566915 INAFM1C9JVW0 142 aa3.24□□□□□ -1.89
LPCAT2-208ENST00000566915 UBE2D1P51668 147 aa3.24□□□□□ -1.89
LPCAT2-208ENST00000566915 CRIP2P52943 208 aaPredicted RBP3.24□□□□□ -1.89
LPCAT2-208ENST00000566915 C14orf132Q9NPU4 83 aa3.24□□□□□ -1.89
LPCAT2-208ENST00000566915 WFDC9Q8NEX5 89 aa3.24□□□□□ -1.89
LPCAT2-208ENST00000566915 Q6YL49 198 aa3.24□□□□□ -1.89
LPCAT2-208ENST00000566915 TNCP24821 2201 aa3.24□□□□□ -1.89
LPCAT2-208ENST00000566915 SPRY2O43597 315 aa3.24□□□□□ -1.89
LPCAT2-208ENST00000566915 DEFB114Q30KQ6 69 aa3.24□□□□□ -1.89
LPCAT2-208ENST00000566915 CLPSL2Q6UWE3 100 aa3.24□□□□□ -1.89
LPCAT2-208ENST00000566915 LINC00467Q9BRT7 94 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms