RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 KLLNB2CW77 178 aa8.62□□□□□ -1.03
CDH1-210ENST00000566612 ZNF702PQ9H963 129 aa8.62□□□□□ -1.03
CDH1-210ENST00000566612 COL12A1Q99715 3063 aa8.62□□□□□ -1.03
CDH1-210ENST00000566612 HECTD1Q9ULT8 2610 aa8.62□□□□□ -1.03
CDH1-210ENST00000566612 HHLA3Q9XRX5 114 aa8.61□□□□□ -1.03
CDH1-210ENST00000566612 DAND5Q8N907 189 aa8.61□□□□□ -1.03
CDH1-210ENST00000566612 IGHV4-4A0A075B6R2 117 aa8.61□□□□□ -1.03
CDH1-210ENST00000566612 M0QY20 66 aa8.61□□□□□ -1.03
CDH1-210ENST00000566612 C6orf226Q5I0X4 101 aa8.61□□□□□ -1.03
CDH1-210ENST00000566612 MUSTN1Q8IVN3 82 aa8.61□□□□□ -1.03
CDH1-210ENST00000566612 C4orf3Q8WVX3 66 aa8.61□□□□□ -1.03
CDH1-210ENST00000566612 TMEM243Q9BU79 118 aa8.61□□□□□ -1.03
CDH1-210ENST00000566612 C2orf82Q6UX34 121 aa8.61□□□□□ -1.03
CDH1-210ENST00000566612 FLNBO75369 2602 aaKnown RBP8.6□□□□□ -1.03
CDH1-210ENST00000566612 PAX4O43316 350 aa8.6□□□□□ -1.03
CDH1-210ENST00000566612 LGALS9O00182 355 aa8.6□□□□□ -1.03
CDH1-210ENST00000566612 LEPROTO15243 131 aa8.6□□□□□ -1.03
CDH1-210ENST00000566612 MALP21145 153 aa8.6□□□□□ -1.03
CDH1-210ENST00000566612 PFN2P35080 140 aa8.6□□□□□ -1.03
CDH1-210ENST00000566612 DEFB114Q30KQ6 69 aa8.6□□□□□ -1.03
CDH1-210ENST00000566612 Q6ZSV7 163 aa8.6□□□□□ -1.03
CDH1-210ENST00000566612 A0A1B0GV72 72 aa8.59□□□□□ -1.03
CDH1-210ENST00000566612 ATXN8Q156A1 80 aa8.59□□□□□ -1.03
CDH1-210ENST00000566612 TTC32Q5I0X7 151 aa8.59□□□□□ -1.03
CDH1-210ENST00000566612 CLPSL2Q6UWE3 100 aa8.59□□□□□ -1.03
CDH1-210ENST00000566612 CRIP2P52943 208 aaPredicted RBP8.59□□□□□ -1.03
CDH1-210ENST00000566612 CFAP161Q6P656 301 aa8.59□□□□□ -1.03
CDH1-210ENST00000566612 Q9H8V8 135 aa8.59□□□□□ -1.03
CDH1-210ENST00000566612 TRBV20-1A0A075B6N2 111 aa8.58□□□□□ -1.04
CDH1-210ENST00000566612 CFC1BP0CG36 223 aa8.58□□□□□ -1.04
CDH1-210ENST00000566612 CFC1P0CG37 223 aa8.58□□□□□ -1.04
CDH1-210ENST00000566612 FLNCQ14315 2725 aa8.58□□□□□ -1.04
CDH1-210ENST00000566612 SOCS3O14543 225 aa8.58□□□□□ -1.04
CDH1-210ENST00000566612 CRYGDP07320 174 aa8.58□□□□□ -1.04
CDH1-210ENST00000566612 PSMG3-AS1Q96PY0 264 aa8.58□□□□□ -1.04
CDH1-210ENST00000566612 RELNP78509 3460 aa8.58□□□□□ -1.04
CDH1-210ENST00000566612 POLR2KP53803 58 aaKnown RBP8.57□□□□□ -1.04
CDH1-210ENST00000566612 Q6ZTI0 123 aa8.57□□□□□ -1.04
CDH1-210ENST00000566612 SPANXA1Q9NS26 97 aa8.57□□□□□ -1.04
CDH1-210ENST00000566612 BBC3Q96PG8 261 aaPredicted RBP8.57□□□□□ -1.04
CDH1-210ENST00000566612 ODF3Q96PU9 254 aa8.57□□□□□ -1.04
CDH1-210ENST00000566612 TM2D2Q9BX73 214 aa8.57□□□□□ -1.04
CDH1-210ENST00000566612 ESM1Q9NQ30 184 aa8.57□□□□□ -1.04
CDH1-210ENST00000566612 Q6ZUT4 128 aa8.57□□□□□ -1.04
CDH1-210ENST00000566612 TRBV7-3A0A075B6L6 115 aa8.56□□□□□ -1.04
CDH1-210ENST00000566612 IGHV3-30-3P0DP02 117 aa8.56□□□□□ -1.04
CDH1-210ENST00000566612 TRBV27A0A0K0K1C4 114 aa8.56□□□□□ -1.04
CDH1-210ENST00000566612 CKS1BP61024 79 aa8.56□□□□□ -1.04
CDH1-210ENST00000566612 PTH2Q96A98 100 aa8.56□□□□□ -1.04
CDH1-210ENST00000566612 CFAP46Q8IYW2 2715 aa8.56□□□□□ -1.04
CDH1-210ENST00000566612 GAGE12HA6NDE8 117 aa8.56□□□□□ -1.04
CDH1-210ENST00000566612 HERVK_113P63121 156 aa8.56□□□□□ -1.04
CDH1-210ENST00000566612 IGLV2-18A0A075B6J9 118 aa8.56□□□□□ -1.04
CDH1-210ENST00000566612 A0A0J9YY99 117 aa8.56□□□□□ -1.04
CDH1-210ENST00000566612 SLC25A20O43772 301 aa8.56□□□□□ -1.04
CDH1-210ENST00000566612 CRPP02741 224 aa8.56□□□□□ -1.04
CDH1-210ENST00000566612 C10orf126Q8N4M7 172 aa8.56□□□□□ -1.04
CDH1-210ENST00000566612 IGLV4-3A0A075B6K6 122 aa8.55□□□□□ -1.04
CDH1-210ENST00000566612 C5orf38Q86SI9 138 aa8.55□□□□□ -1.04
CDH1-210ENST00000566612 TRAV8-4A0A0B4J246 113 aa8.55□□□□□ -1.04
CDH1-210ENST00000566612 F5H768 121 aa8.55□□□□□ -1.04
CDH1-210ENST00000566612 K7EQD1 137 aa8.55□□□□□ -1.04
CDH1-210ENST00000566612 RNF152Q8N8N0 203 aa8.55□□□□□ -1.04
CDH1-210ENST00000566612 DEFB4AO15263 64 aa8.54□□□□□ -1.04
CDH1-210ENST00000566612 LINC00467Q9BRT7 94 aa8.54□□□□□ -1.04
CDH1-210ENST00000566612 WFDC10AQ9H1F0 79 aa8.54□□□□□ -1.04
CDH1-210ENST00000566612 FLNAP21333 2647 aaKnown RBP8.54□□□□□ -1.04
CDH1-210ENST00000566612 SMG1Q96Q15 3661 aaKnown RBP8.54□□□□□ -1.04
CDH1-210ENST00000566612 A8MZ25 164 aa8.54□□□□□ -1.04
CDH1-210ENST00000566612 NXPH4O95158 308 aa8.54□□□□□ -1.04
CDH1-210ENST00000566612 C9orf85Q96MD7 179 aa8.54□□□□□ -1.04
CDH1-210ENST00000566612 ZNF22P17026 224 aaPredicted RBP8.54□□□□□ -1.04
CDH1-210ENST00000566612 PPDPFLQ8WWR9 84 aa8.54□□□□□ -1.04
CDH1-210ENST00000566612 DNAJC30Q96LL9 226 aa8.54□□□□□ -1.04
CDH1-210ENST00000566612 TSHBP01222 138 aa8.53□□□□□ -1.04
CDH1-210ENST00000566612 CFAP126Q5VTH2 177 aa8.53□□□□□ -1.04
CDH1-210ENST00000566612 NTN5Q8WTR8 489 aaPredicted RBP8.53□□□□□ -1.04
CDH1-210ENST00000566612 XCL1P47992 114 aa8.53□□□□□ -1.04
CDH1-210ENST00000566612 NDUFA11Q86Y39 141 aa8.53□□□□□ -1.04
CDH1-210ENST00000566612 RBMY1BA6NDE4 496 aaKnown RBP8.52□□□□□ -1.04
CDH1-210ENST00000566612 RBMY1EA6NEQ0 496 aaKnown RBP8.52□□□□□ -1.04
CDH1-210ENST00000566612 RBMY1DP0C7P1 496 aaKnown RBP8.52□□□□□ -1.04
CDH1-210ENST00000566612 RBMY1A1P0DJD3 496 aaKnown RBP8.52□□□□□ -1.04
CDH1-210ENST00000566612 RBMY1CP0DJD4 496 aa8.52□□□□□ -1.04
CDH1-210ENST00000566612 DAD1P61803 113 aa8.52□□□□□ -1.04
CDH1-210ENST00000566612 SS18Q15532 418 aa8.52□□□□□ -1.04
CDH1-210ENST00000566612 TMEM86BQ8N661 226 aa8.52□□□□□ -1.04
CDH1-210ENST00000566612 TSPAN13O95857 204 aa8.52□□□□□ -1.05
CDH1-210ENST00000566612 LRRC75A-AS1Q8N1F1 130 aa8.52□□□□□ -1.05
CDH1-210ENST00000566612 CDKN2A-AS1Q9UH64 79 aa8.52□□□□□ -1.05
CDH1-210ENST00000566612 ZMAT4Q9H898 229 aa8.52□□□□□ -1.05
CDH1-210ENST00000566612 TRAV25A0A0B4J276 109 aa8.52□□□□□ -1.05
CDH1-210ENST00000566612 TRBV6-5A0A0K0K1A5 114 aa8.52□□□□□ -1.05
CDH1-210ENST00000566612 RBX1P62877 108 aa8.52□□□□□ -1.05
CDH1-210ENST00000566612 IGIPA6NJ69 53 aa8.51□□□□□ -1.05
CDH1-210ENST00000566612 ITPR3Q14573 2671 aa8.51□□□□□ -1.05
CDH1-210ENST00000566612 IGHV1-58A0A0C4DH39 117 aa8.51□□□□□ -1.05
CDH1-210ENST00000566612 VSIG2Q96IQ7 327 aa8.51□□□□□ -1.05
CDH1-210ENST00000566612 GYPEP15421 78 aa8.51□□□□□ -1.05
CDH1-210ENST00000566612 SLC25A29Q8N8R3 303 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms