RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 UBE2L6O14933 153 aa7.7□□□□□ -1.18
UBR1-206ENST00000566493 PDE6DO43924 150 aa7.7□□□□□ -1.18
UBR1-206ENST00000566493 IFNA1P01562 189 aa7.7□□□□□ -1.18
UBR1-206ENST00000566493 RASL11AQ6T310 242 aa7.7□□□□□ -1.18
UBR1-206ENST00000566493 hDV102S1A0JD36 115 aa7.69□□□□□ -1.18
UBR1-206ENST00000566493 C19orf71A6NCJ1 209 aa7.69□□□□□ -1.18
UBR1-206ENST00000566493 MEF2BQ02080 365 aaPredicted RBP7.69□□□□□ -1.18
UBR1-206ENST00000566493 KRTAP26-1Q6PEX3 210 aa7.69□□□□□ -1.18
UBR1-206ENST00000566493 LYZL1Q6UWQ5 148 aa7.69□□□□□ -1.18
UBR1-206ENST00000566493 DPH3Q96FX2 82 aa7.69□□□□□ -1.18
UBR1-206ENST00000566493 DPH3P1Q9H4G8 78 aa7.69□□□□□ -1.18
UBR1-206ENST00000566493 NIT2Q9NQR4 276 aa7.69□□□□□ -1.18
UBR1-206ENST00000566493 AP5S1Q9NUS5 200 aa7.69□□□□□ -1.18
UBR1-206ENST00000566493 MED9Q9NWA0 146 aa7.69□□□□□ -1.18
UBR1-206ENST00000566493 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.68□□□□□ -1.18
UBR1-206ENST00000566493 A0A1B0GUV1 79 aa7.68□□□□□ -1.18
UBR1-206ENST00000566493 NTF3P20783 257 aa7.68□□□□□ -1.18
UBR1-206ENST00000566493 WDR73Q6P4I2 378 aa7.68□□□□□ -1.18
UBR1-206ENST00000566493 C20orf203Q8NBC4 194 aa7.68□□□□□ -1.18
UBR1-206ENST00000566493 PGLYRP4Q96LB8 373 aa7.68□□□□□ -1.18
UBR1-206ENST00000566493 AMTP48728 403 aa7.67□□□□□ -1.18
UBR1-206ENST00000566493 SULT1A2P50226 295 aa7.67□□□□□ -1.18
UBR1-206ENST00000566493 CNBPP62633 177 aaKnown RBP7.67□□□□□ -1.18
UBR1-206ENST00000566493 COTL1Q14019 142 aa7.67□□□□□ -1.18
UBR1-206ENST00000566493 TWIST1Q15672 202 aa7.67□□□□□ -1.18
UBR1-206ENST00000566493 SDIM1Q6ZPB5 146 aa7.67□□□□□ -1.18
UBR1-206ENST00000566493 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.67□□□□□ -1.18
UBR1-206ENST00000566493 PKHD1L1Q86WI1 4243 aa7.67□□□□□ -1.18
UBR1-206ENST00000566493 FAT3Q8TDW7 4589 aa7.66□□□□□ -1.18
UBR1-206ENST00000566493 LRP1Q07954 4544 aaKnown RBP7.66□□□□□ -1.18
UBR1-206ENST00000566493 IGLV4-60A0A075B6I1 120 aa7.66□□□□□ -1.18
UBR1-206ENST00000566493 IGHV3-64A0A075B6Q5 118 aa7.66□□□□□ -1.18
UBR1-206ENST00000566493 C9orf62Q8N4C0 152 aa7.66□□□□□ -1.18
UBR1-206ENST00000566493 FAM210AQ96ND0 272 aa7.66□□□□□ -1.18
UBR1-206ENST00000566493 BCL2P10415 239 aa7.65□□□□□ -1.18
UBR1-206ENST00000566493 TAGLN2P37802 199 aaKnown RBP7.65□□□□□ -1.18
UBR1-206ENST00000566493 SMIM15Q7Z3B0 74 aa7.65□□□□□ -1.18
UBR1-206ENST00000566493 NUDT10Q8NFP7 164 aa7.65□□□□□ -1.18
UBR1-206ENST00000566493 NUDT11Q96G61 164 aa7.65□□□□□ -1.18
UBR1-206ENST00000566493 TRBV20OR9-2A0A075B6H5 130 aa7.64□□□□□ -1.19
UBR1-206ENST00000566493 PANO1I0J062 215 aa7.64□□□□□ -1.19
UBR1-206ENST00000566493 CTRLP40313 264 aa7.64□□□□□ -1.19
UBR1-206ENST00000566493 CFAP161Q6P656 301 aa7.64□□□□□ -1.19
UBR1-206ENST00000566493 GFRA4Q9GZZ7 299 aa7.64□□□□□ -1.19
UBR1-206ENST00000566493 HNRNPA3P51991 378 aaKnown RBP7.63□□□□□ -1.19
UBR1-206ENST00000566493 AMMECR1LQ6DCA0 310 aa7.63□□□□□ -1.19
UBR1-206ENST00000566493 RNF185Q96GF1 192 aa7.63□□□□□ -1.19
UBR1-206ENST00000566493 RPP21Q9H633 154 aaKnown RBP7.63□□□□□ -1.19
UBR1-206ENST00000566493 PLA2G2DQ9UNK4 145 aa7.63□□□□□ -1.19
UBR1-206ENST00000566493 IGKV3OR2-268A0A0C4DH90 116 aa7.62□□□□□ -1.19
UBR1-206ENST00000566493 GAGE12HA6NDE8 117 aa7.62□□□□□ -1.19
UBR1-206ENST00000566493 SLC51BQ86UW2 128 aa7.62□□□□□ -1.19
UBR1-206ENST00000566493 GATD1Q8NB37 220 aa7.62□□□□□ -1.19
UBR1-206ENST00000566493 CNFNQ9BYD5 112 aa7.62□□□□□ -1.19
UBR1-206ENST00000566493 RNASE7Q9H1E1 156 aaKnown RBP7.62□□□□□ -1.19
UBR1-206ENST00000566493 TRAV26-2A0A0B4J265 109 aa7.61□□□□□ -1.19
UBR1-206ENST00000566493 NCR2O95944 276 aa7.61□□□□□ -1.19
UBR1-206ENST00000566493 SLPIP03973 132 aa7.61□□□□□ -1.19
UBR1-206ENST00000566493 CIRBPQ14011 172 aaKnown RBP7.61□□□□□ -1.19
UBR1-206ENST00000566493 RNASEKQ6P5S7 137 aaKnown RBP7.61□□□□□ -1.19
UBR1-206ENST00000566493 TEX261Q6UWH6 196 aa7.61□□□□□ -1.19
UBR1-206ENST00000566493 OCC1Q8TAD7 63 aa7.61□□□□□ -1.19
UBR1-206ENST00000566493 A0A087WYN8 130 aa7.6□□□□□ -1.19
UBR1-206ENST00000566493 H7C423 109 aa7.6□□□□□ -1.19
UBR1-206ENST00000566493 APCSP02743 223 aa7.6□□□□□ -1.19
UBR1-206ENST00000566493 CHTF8P0CG12 524 aa7.6□□□□□ -1.19
UBR1-206ENST00000566493 Q6ZRU5 148 aa7.6□□□□□ -1.19
UBR1-206ENST00000566493 TCTE3Q8IZS6 198 aa7.6□□□□□ -1.19
UBR1-206ENST00000566493 HMCN2Q8NDA2 5059 aa7.59□□□□□ -1.19
UBR1-206ENST00000566493 K7EN84 100 aa7.59□□□□□ -1.19
UBR1-206ENST00000566493 GATCO43716 136 aaKnown RBP7.59□□□□□ -1.19
UBR1-206ENST00000566493 RPS10P46783 165 aaKnown RBP7.59□□□□□ -1.19
UBR1-206ENST00000566493 Q6ZNX1 250 aa7.59□□□□□ -1.19
UBR1-206ENST00000566493 C15orf56Q8N910 161 aa7.59□□□□□ -1.19
UBR1-206ENST00000566493 SPACA4Q8TDM5 124 aa7.59□□□□□ -1.19
UBR1-206ENST00000566493 C7orf33Q8WU49 177 aa7.59□□□□□ -1.19
UBR1-206ENST00000566493 CHCHD10Q8WYQ3 142 aaPredicted RBP7.59□□□□□ -1.19
UBR1-206ENST00000566493 RPL39LQ96EH5 51 aaKnown RBP7.59□□□□□ -1.19
UBR1-206ENST00000566493 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.58□□□□□ -1.2
UBR1-206ENST00000566493 IGKV2-29A2NJV5 120 aaPredicted RBP7.58□□□□□ -1.2
UBR1-206ENST00000566493 PMCHP20382 165 aa7.58□□□□□ -1.2
UBR1-206ENST00000566493 COX6A2Q02221 97 aa7.58□□□□□ -1.2
UBR1-206ENST00000566493 HIGD2BQ4VC39 106 aa7.58□□□□□ -1.2
UBR1-206ENST00000566493 GTSF1Q8WW33 167 aa7.58□□□□□ -1.2
UBR1-206ENST00000566493 BORCS7Q96B45 105 aa7.58□□□□□ -1.2
UBR1-206ENST00000566493 BTF3L4Q96K17 158 aa7.58□□□□□ -1.2
UBR1-206ENST00000566493 A0A1B0GVG6 124 aa7.57□□□□□ -1.2
UBR1-206ENST00000566493 SDHAF1A6NFY7 115 aa7.57□□□□□ -1.2
UBR1-206ENST00000566493 A8MWL6 223 aa7.57□□□□□ -1.2
UBR1-206ENST00000566493 I3L3M4 83 aa7.57□□□□□ -1.2
UBR1-206ENST00000566493 NDUFS6O75380 124 aaKnown RBP7.57□□□□□ -1.2
UBR1-206ENST00000566493 FGF6P10767 208 aa7.57□□□□□ -1.2
UBR1-206ENST00000566493 ZNF25P17030 456 aaPredicted RBP7.57□□□□□ -1.2
UBR1-206ENST00000566493 FOXA3P55318 350 aaPredicted RBP7.57□□□□□ -1.2
UBR1-206ENST00000566493 MAJINQ3KP22 176 aa7.57□□□□□ -1.2
UBR1-206ENST00000566493 TMEM101Q96IK0 257 aa7.57□□□□□ -1.2
UBR1-206ENST00000566493 PLAC8Q9NZF1 115 aa7.57□□□□□ -1.2
UBR1-206ENST00000566493 IGKV2-24A0A0C4DH68 120 aa7.56□□□□□ -1.2
UBR1-206ENST00000566493 TMEM250H0YL14 139 aa7.56□□□□□ -1.2
UBR1-206ENST00000566493 H3BS24 57 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms