RNA–Protein interactions for RNA: ENST00000564333.1

CCNF-204, Transcript of cyclin F, humanhuman

Gene CCNF, Length 1,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-204ENST00000564333 PGPEP1Q9NXJ5 209 aa12.07□□□□□ -0.48
CCNF-204ENST00000564333 PRO0461Q9UI25 63 aa12.07□□□□□ -0.48
CCNF-204ENST00000564333 SONP18583 2426 aaKnown RBP12.07□□□□□ -0.48
CCNF-204ENST00000564333 IGLV4-69A0A075B6H9 119 aa12.07□□□□□ -0.48
CCNF-204ENST00000564333 CLUHP3Q96NS8 147 aa12.07□□□□□ -0.48
CCNF-204ENST00000564333 LINC01587Q99440 93 aa12.07□□□□□ -0.48
CCNF-204ENST00000564333 EDA2RQ9HAV5 297 aa12.07□□□□□ -0.48
CCNF-204ENST00000564333 A8MWV9 139 aa12.06□□□□□ -0.48
CCNF-204ENST00000564333 SPATA25Q9BR10 227 aa12.06□□□□□ -0.48
CCNF-204ENST00000564333 MYO9AB2RTY4 2548 aa12.06□□□□□ -0.48
CCNF-204ENST00000564333 IGHV3-73A0A0B4J1V6 119 aa12.05□□□□□ -0.48
CCNF-204ENST00000564333 GAGE12HA6NDE8 117 aa12.05□□□□□ -0.48
CCNF-204ENST00000564333 PIK3CD-AS1Q5SR53 167 aa12.05□□□□□ -0.48
CCNF-204ENST00000564333 STHQ8IWL8 128 aa12.05□□□□□ -0.48
CCNF-204ENST00000564333 ZNF418Q8TF45 676 aaPredicted RBP12.05□□□□□ -0.48
CCNF-204ENST00000564333 ANK3Q12955 4377 aaKnown RBP12.05□□□□□ -0.48
CCNF-204ENST00000564333 I3L3M4 83 aa12.05□□□□□ -0.48
CCNF-204ENST00000564333 C11orf72Q8NBR9 251 aa12.05□□□□□ -0.48
CCNF-204ENST00000564333 PTH2Q96A98 100 aa12.05□□□□□ -0.48
CCNF-204ENST00000564333 TRBV20-1A0A075B6N2 111 aa12.04□□□□□ -0.48
CCNF-204ENST00000564333 A0A0J9YY99 117 aa12.04□□□□□ -0.48
CCNF-204ENST00000564333 ETDBQ3ZM63 59 aa12.04□□□□□ -0.48
CCNF-204ENST00000564333 HILS1P60008 231 aa12.03□□□□□ -0.48
CCNF-204ENST00000564333 VCX2Q9H322 139 aa12.03□□□□□ -0.48
CCNF-204ENST00000564333 NACAE9PAV3 2078 aa12.03□□□□□ -0.48
CCNF-204ENST00000564333 PROK1P58294 105 aa12.03□□□□□ -0.48
CCNF-204ENST00000564333 NFE4Q86UQ8 179 aa12.03□□□□□ -0.48
CCNF-204ENST00000564333 SLC25A29Q8N8R3 303 aa12.03□□□□□ -0.48
CCNF-204ENST00000564333 XCL2Q9UBD3 114 aa12.03□□□□□ -0.48
CCNF-204ENST00000564333 P0DMU3 169 aa12.02□□□□□ -0.49
CCNF-204ENST00000564333 FAM231AP0DMU4 169 aa12.02□□□□□ -0.49
CCNF-204ENST00000564333 FAM231CP0DMU5 169 aa12.02□□□□□ -0.49
CCNF-204ENST00000564333 UBE2D3P61077 147 aa12.02□□□□□ -0.49
CCNF-204ENST00000564333 UBE2D2P62837 147 aa12.02□□□□□ -0.49
CCNF-204ENST00000564333 PLEKHB2Q96CS7 222 aa12.02□□□□□ -0.49
CCNF-204ENST00000564333 SPXQ9BT56 116 aa12.02□□□□□ -0.49
CCNF-204ENST00000564333 CUBNO60494 3623 aa12.02□□□□□ -0.49
CCNF-204ENST00000564333 APOMO95445 188 aa12.01□□□□□ -0.49
CCNF-204ENST00000564333 TMEM170BQ5T4T1 132 aa12.01□□□□□ -0.49
CCNF-204ENST00000564333 CFAP126Q5VTH2 177 aa12.01□□□□□ -0.49
CCNF-204ENST00000564333 C20orf203Q8NBC4 194 aa12.01□□□□□ -0.49
CCNF-204ENST00000564333 C1QTNF4Q9BXJ3 329 aa12.01□□□□□ -0.49
CCNF-204ENST00000564333 RHODO00212 210 aa12.01□□□□□ -0.49
CCNF-204ENST00000564333 TSPAN13O95857 204 aa12.01□□□□□ -0.49
CCNF-204ENST00000564333 LGALS3P17931 250 aaKnown RBP12.01□□□□□ -0.49
CCNF-204ENST00000564333 AZU1P20160 251 aa12.01□□□□□ -0.49
CCNF-204ENST00000564333 EMP1P54849 157 aa12.01□□□□□ -0.49
CCNF-204ENST00000564333 SH2D6Q7Z4S9 175 aa12.01□□□□□ -0.49
CCNF-204ENST00000564333 NDUFA11Q86Y39 141 aa12.01□□□□□ -0.49
CCNF-204ENST00000564333 J3QQQ9 107 aa11.99□□□□□ -0.49
CCNF-204ENST00000564333 NDUFA7O95182 113 aa11.99□□□□□ -0.49
CCNF-204ENST00000564333 TNFRSF18Q9Y5U5 241 aa11.99□□□□□ -0.49
CCNF-204ENST00000564333 LEPROTO15243 131 aa11.99□□□□□ -0.49
CCNF-204ENST00000564333 IGHV3-30P01768 117 aa11.99□□□□□ -0.49
CCNF-204ENST00000564333 IGHV3-30-5P0DP03 117 aa11.99□□□□□ -0.49
CCNF-204ENST00000564333 BEAN1Q3B7T3 259 aa11.99□□□□□ -0.49
CCNF-204ENST00000564333 C1orf158Q8N1D5 194 aa11.99□□□□□ -0.49
CCNF-204ENST00000564333 IGHV3OR16-12A0A075B7B8 117 aa11.98□□□□□ -0.49
CCNF-204ENST00000564333 LOC107984156A0A0G2JMH3 177 aa11.98□□□□□ -0.49
CCNF-204ENST00000564333 ARL17AQ8IVW1 177 aa11.98□□□□□ -0.49
CCNF-204ENST00000564333 SMR3AQ99954 134 aa11.98□□□□□ -0.49
CCNF-204ENST00000564333 GTSF1LQ9H1H1 148 aa11.98□□□□□ -0.49
CCNF-204ENST00000564333 ADARB2-AS1A8MUL3 147 aa11.98□□□□□ -0.49
CCNF-204ENST00000564333 PSMB2P49721 201 aa11.98□□□□□ -0.49
CCNF-204ENST00000564333 CRYBA4P53673 196 aa11.98□□□□□ -0.49
CCNF-204ENST00000564333 FOXI1Q12951 378 aa11.98□□□□□ -0.49
CCNF-204ENST00000564333 Q6ZSN1 163 aa11.98□□□□□ -0.49
CCNF-204ENST00000564333 C10orf126Q8N4M7 172 aa11.98□□□□□ -0.49
CCNF-204ENST00000564333 OPRPNQ99935 248 aaPredicted RBP11.98□□□□□ -0.49
CCNF-204ENST00000564333 OTOGQ6ZRI0 2925 aa11.97□□□□□ -0.49
CCNF-204ENST00000564333 RS1O15537 224 aa11.97□□□□□ -0.49
CCNF-204ENST00000564333 ZNRF2Q8NHG8 242 aa11.97□□□□□ -0.49
CCNF-204ENST00000564333 IL17DQ8TAD2 202 aa11.97□□□□□ -0.49
CCNF-204ENST00000564333 CIDEAO60543 219 aa11.96□□□□□ -0.49
CCNF-204ENST00000564333 CMC4P56277 68 aaPredicted RBP11.96□□□□□ -0.49
CCNF-204ENST00000564333 PRO1854Q9UHT4 67 aa11.96□□□□□ -0.49
CCNF-204ENST00000564333 IGLV4-3A0A075B6K6 122 aa11.96□□□□□ -0.5
CCNF-204ENST00000564333 TMEM223A0PJW6 202 aa11.96□□□□□ -0.5
CCNF-204ENST00000564333 IGLV1-51P01701 117 aa11.96□□□□□ -0.5
CCNF-204ENST00000564333 IGHV3-53P01767 116 aa11.96□□□□□ -0.5
CCNF-204ENST00000564333 M0QXV9 152 aa11.95□□□□□ -0.5
CCNF-204ENST00000564333 CFC1BP0CG36 223 aa11.95□□□□□ -0.5
CCNF-204ENST00000564333 CFC1P0CG37 223 aa11.95□□□□□ -0.5
CCNF-204ENST00000564333 AMELXQ99217 191 aa11.95□□□□□ -0.5
CCNF-204ENST00000564333 PYGO1Q9Y3Y4 419 aa11.95□□□□□ -0.5
CCNF-204ENST00000564333 WNK1Q9H4A3 2382 aa11.94□□□□□ -0.5
CCNF-204ENST00000564333 CYSRT1A8MQ03 144 aa11.94□□□□□ -0.5
CCNF-204ENST00000564333 SMAGPQ0VAQ4 97 aa11.94□□□□□ -0.5
CCNF-204ENST00000564333 PPDPFLQ8WWR9 84 aa11.94□□□□□ -0.5
CCNF-204ENST00000564333 DNAJC30Q96LL9 226 aa11.94□□□□□ -0.5
CCNF-204ENST00000564333 Q9UF83 564 aa11.94□□□□□ -0.5
CCNF-204ENST00000564333 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.94□□□□□ -0.5
CCNF-204ENST00000564333 A0A1B0GV72 72 aa11.94□□□□□ -0.5
CCNF-204ENST00000564333 TSPEAR-AS2P59090 65 aa11.94□□□□□ -0.5
CCNF-204ENST00000564333 SBSPONQ8IVN8 264 aa11.94□□□□□ -0.5
CCNF-204ENST00000564333 A0A0B4J2C4 111 aa11.93□□□□□ -0.5
CCNF-204ENST00000564333 TEN1Q86WV5 123 aa11.93□□□□□ -0.5
CCNF-204ENST00000564333 WFDC10AQ9H1F0 79 aa11.93□□□□□ -0.5
CCNF-204ENST00000564333 ACANP16112 2415 aa11.93□□□□□ -0.5
CCNF-204ENST00000564333 TRGV1A0A0A0MS02 117 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms