RNA–Protein interactions for RNA: ENST00000563328.4

AC004943.2-201, humanhuman

TSL 3 BASIC

Gene AC004943.2, Length 4,842 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004943.2-201ENST00000563328 TMEM223A0PJW6 202 aa11.72□□□□□ -0.53
AC004943.2-201ENST00000563328 IGHV3-30-3P0DP02 117 aa11.72□□□□□ -0.53
AC004943.2-201ENST00000563328 USP9YO00507 2555 aaPredicted RBP11.72□□□□□ -0.53
AC004943.2-201ENST00000563328 IGKV1OR2-108A0A075B7D4 117 aa11.72□□□□□ -0.53
AC004943.2-201ENST00000563328 UBE2AP49459 152 aa11.72□□□□□ -0.53
AC004943.2-201ENST00000563328 TANC2Q9HCD6 1990 aa11.71□□□□□ -0.53
AC004943.2-201ENST00000563328 CHD9Q3L8U1 2897 aa11.71□□□□□ -0.53
AC004943.2-201ENST00000563328 OXLD1Q5BKU9 147 aa11.71□□□□□ -0.53
AC004943.2-201ENST00000563328 PIK3CD-AS1Q5SR53 167 aa11.71□□□□□ -0.53
AC004943.2-201ENST00000563328 PRUNE2Q8WUY3 3088 aa11.71□□□□□ -0.53
AC004943.2-201ENST00000563328 TMEM256-PLSCR3K7ERE1 68 aa11.71□□□□□ -0.54
AC004943.2-201ENST00000563328 RNF5Q99942 180 aa11.71□□□□□ -0.54
AC004943.2-201ENST00000563328 RNF223E7ERA6 249 aa11.7□□□□□ -0.54
AC004943.2-201ENST00000563328 NREPQ16612 68 aa11.7□□□□□ -0.54
AC004943.2-201ENST00000563328 LINC00336Q6ZUF6 198 aa11.7□□□□□ -0.54
AC004943.2-201ENST00000563328 IL17DQ8TAD2 202 aa11.7□□□□□ -0.54
AC004943.2-201ENST00000563328 CD164Q04900 197 aa11.7□□□□□ -0.54
AC004943.2-201ENST00000563328 TRBV6-1A0A0K0K1D8 114 aa11.7□□□□□ -0.54
AC004943.2-201ENST00000563328 TRBV27A0A0K0K1C4 114 aa11.7□□□□□ -0.54
AC004943.2-201ENST00000563328 PF4P02776 101 aa11.7□□□□□ -0.54
AC004943.2-201ENST00000563328 ZNF833PQ6ZTB9 187 aa11.69□□□□□ -0.54
AC004943.2-201ENST00000563328 C22orf34Q6ZV56 151 aa11.69□□□□□ -0.54
AC004943.2-201ENST00000563328 TMEM263Q8WUH6 116 aaKnown RBP11.69□□□□□ -0.54
AC004943.2-201ENST00000563328 SETD2Q9BYW2 2564 aaPredicted RBP11.69□□□□□ -0.54
AC004943.2-201ENST00000563328 PAX8Q06710 450 aa11.69□□□□□ -0.54
AC004943.2-201ENST00000563328 U3KQK5 164 aa11.69□□□□□ -0.54
AC004943.2-201ENST00000563328 ZMAT4Q9H898 229 aa11.69□□□□□ -0.54
AC004943.2-201ENST00000563328 UNC80Q8N2C7 3258 aa11.68□□□□□ -0.54
AC004943.2-201ENST00000563328 USP9XQ93008 2570 aaPredicted RBP11.68□□□□□ -0.54
AC004943.2-201ENST00000563328 IGHV1-58A0A0C4DH39 117 aa11.68□□□□□ -0.54
AC004943.2-201ENST00000563328 LHBP01229 141 aa11.68□□□□□ -0.54
AC004943.2-201ENST00000563328 COX7B2Q8TF08 81 aa11.68□□□□□ -0.54
AC004943.2-201ENST00000563328 MRPL36Q9P0J6 103 aaKnown RBP11.68□□□□□ -0.54
AC004943.2-201ENST00000563328 OPRPNQ99935 248 aaPredicted RBP11.68□□□□□ -0.54
AC004943.2-201ENST00000563328 DSCR9P59020 149 aa11.67□□□□□ -0.54
AC004943.2-201ENST00000563328 ADORA2A-AS1P86434 159 aa11.67□□□□□ -0.54
AC004943.2-201ENST00000563328 PDE6GP18545 87 aa11.67□□□□□ -0.54
AC004943.2-201ENST00000563328 SERTAD4-AS1Q5TG53 156 aa11.67□□□□□ -0.54
AC004943.2-201ENST00000563328 G3V318 75 aa11.67□□□□□ -0.54
AC004943.2-201ENST00000563328 HCFC1P51610 2035 aa11.66□□□□□ -0.54
AC004943.2-201ENST00000563328 HIVEP2P31629 2446 aa11.66□□□□□ -0.54
AC004943.2-201ENST00000563328 LRCOL1A6NCL2 159 aa11.66□□□□□ -0.54
AC004943.2-201ENST00000563328 NDUFS5O43920 106 aa11.66□□□□□ -0.54
AC004943.2-201ENST00000563328 MSMBP08118 114 aa11.66□□□□□ -0.54
AC004943.2-201ENST00000563328 PSPHP1O15172 72 aa11.66□□□□□ -0.54
AC004943.2-201ENST00000563328 Q6ZS46 218 aa11.66□□□□□ -0.54
AC004943.2-201ENST00000563328 ITLN2Q8WWU7 325 aaPredicted RBP11.66□□□□□ -0.54
AC004943.2-201ENST00000563328 KAAG1Q9UBP8 84 aa11.66□□□□□ -0.54
AC004943.2-201ENST00000563328 ZNF491Q8N8L2 437 aa11.66□□□□□ -0.54
AC004943.2-201ENST00000563328 A8MZ25 164 aa11.65□□□□□ -0.54
AC004943.2-201ENST00000563328 NCR3O14931 201 aa11.65□□□□□ -0.54
AC004943.2-201ENST00000563328 AGRNO00468 2067 aa11.65□□□□□ -0.54
AC004943.2-201ENST00000563328 MRPL53Q96EL3 112 aaKnown RBP11.65□□□□□ -0.54
AC004943.2-201ENST00000563328 TRGV2A0A075B6R0 118 aa11.64□□□□□ -0.55
AC004943.2-201ENST00000563328 FAM19A3Q7Z5A8 133 aa11.64□□□□□ -0.55
AC004943.2-201ENST00000563328 LINC00311Q8N616 119 aa11.64□□□□□ -0.55
AC004943.2-201ENST00000563328 ATP6V0E1O15342 81 aa11.64□□□□□ -0.55
AC004943.2-201ENST00000563328 IGLV2-14P01704 120 aa11.63□□□□□ -0.55
AC004943.2-201ENST00000563328 FAM19A4Q96LR4 140 aa11.63□□□□□ -0.55
AC004943.2-201ENST00000563328 CRIP3Q6Q6R5 217 aa11.63□□□□□ -0.55
AC004943.2-201ENST00000563328 CLPSL1A2RUU4 121 aa11.63□□□□□ -0.55
AC004943.2-201ENST00000563328 P0C879 139 aa11.63□□□□□ -0.55
AC004943.2-201ENST00000563328 SORL1Q92673 2214 aa11.63□□□□□ -0.55
AC004943.2-201ENST00000563328 NAV3Q8IVL0 2385 aa11.62□□□□□ -0.55
AC004943.2-201ENST00000563328 IGHV1-69P01742 117 aa11.62□□□□□ -0.55
AC004943.2-201ENST00000563328 ESRGQ1W209 222 aa11.62□□□□□ -0.55
AC004943.2-201ENST00000563328 LRRK2Q5S007 2527 aa11.61□□□□□ -0.55
AC004943.2-201ENST00000563328 TEX22C9J3V5 150 aa11.61□□□□□ -0.55
AC004943.2-201ENST00000563328 LINC01356Q8N9X3 169 aa11.61□□□□□ -0.55
AC004943.2-201ENST00000563328 Q6ZPA2 131 aa11.61□□□□□ -0.55
AC004943.2-201ENST00000563328 PLAC8L1A1L4L8 177 aa11.6□□□□□ -0.55
AC004943.2-201ENST00000563328 NCKAP5O14513 1909 aa11.59□□□□□ -0.55
AC004943.2-201ENST00000563328 LRP4O75096 1905 aa11.59□□□□□ -0.55
AC004943.2-201ENST00000563328 JMJD1CQ15652 2540 aa11.59□□□□□ -0.55
AC004943.2-201ENST00000563328 IGHV3-38A0A0C4DH36 116 aa11.59□□□□□ -0.55
AC004943.2-201ENST00000563328 UBE2E2Q96LR5 201 aa11.59□□□□□ -0.55
AC004943.2-201ENST00000563328 SCXQ7RTU7 201 aa11.59□□□□□ -0.55
AC004943.2-201ENST00000563328 FAM223BA6NKX1 122 aa11.58□□□□□ -0.55
AC004943.2-201ENST00000563328 H3BQ85 93 aa11.58□□□□□ -0.55
AC004943.2-201ENST00000563328 RITA1Q96K30 269 aa11.58□□□□□ -0.55
AC004943.2-201ENST00000563328 ARHGAP32A7KAX9 2087 aa11.58□□□□□ -0.56
AC004943.2-201ENST00000563328 J3QKU1 62 aa11.58□□□□□ -0.56
AC004943.2-201ENST00000563328 OVOL3O00110 214 aa11.58□□□□□ -0.56
AC004943.2-201ENST00000563328 GNRH2O43555 120 aa11.58□□□□□ -0.56
AC004943.2-201ENST00000563328 C4orf48Q5BLP8 95 aa11.58□□□□□ -0.56
AC004943.2-201ENST00000563328 PIP4P2Q8N4L2 257 aa11.58□□□□□ -0.56
AC004943.2-201ENST00000563328 RMI2Q96E14 147 aa11.58□□□□□ -0.56
AC004943.2-201ENST00000563328 Q96MF0 132 aa11.58□□□□□ -0.56
AC004943.2-201ENST00000563328 LENEPQ9Y5L5 61 aa11.58□□□□□ -0.56
AC004943.2-201ENST00000563328 C2CD3Q4AC94 2353 aa11.57□□□□□ -0.56
AC004943.2-201ENST00000563328 CRYGDP07320 174 aa11.57□□□□□ -0.56
AC004943.2-201ENST00000563328 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.57□□□□□ -0.56
AC004943.2-201ENST00000563328 IGKV2-29A2NJV5 120 aaPredicted RBP11.57□□□□□ -0.56
AC004943.2-201ENST00000563328 PRR4Q16378 134 aa11.57□□□□□ -0.56
AC004943.2-201ENST00000563328 TNRC6BQ9UPQ9 1833 aaKnown RBP11.57□□□□□ -0.56
AC004943.2-201ENST00000563328 TRGV4A0A0C4DH28 118 aa11.56□□□□□ -0.56
AC004943.2-201ENST00000563328 NUP210LQ5VU65 1888 aa11.56□□□□□ -0.56
AC004943.2-201ENST00000563328 IGHV4-61A0A0C4DH41 118 aa11.56□□□□□ -0.56
AC004943.2-201ENST00000563328 EPG5Q9HCE0 2579 aa11.56□□□□□ -0.56
AC004943.2-201ENST00000563328 SS18Q15532 418 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms