RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 DNAH1Q9P2D7 4330 aa12.86□□□□□ -0.35
RAB40C-207ENST00000563109 DNAH10OSP0CZ25 163 aa12.85□□□□□ -0.35
RAB40C-207ENST00000563109 FCER1GP30273 86 aa12.85□□□□□ -0.35
RAB40C-207ENST00000563109 DEFB104AQ8WTQ1 72 aa12.85□□□□□ -0.35
RAB40C-207ENST00000563109 VPS13DQ5THJ4 4388 aa12.84□□□□□ -0.35
RAB40C-207ENST00000563109 TRAV9-2A0A087WT02 112 aa12.84□□□□□ -0.35
RAB40C-207ENST00000563109 TCAPO15273 167 aa12.84□□□□□ -0.35
RAB40C-207ENST00000563109 SCO1O75880 301 aa12.84□□□□□ -0.35
RAB40C-207ENST00000563109 LINC01556Q5JQF7 62 aa12.84□□□□□ -0.35
RAB40C-207ENST00000563109 A0A087WX48 190 aa12.83□□□□□ -0.36
RAB40C-207ENST00000563109 NBDYA0A0U1RRE5 68 aa12.83□□□□□ -0.36
RAB40C-207ENST00000563109 UBE2L6O14933 153 aa12.83□□□□□ -0.36
RAB40C-207ENST00000563109 TSHBP01222 138 aa12.83□□□□□ -0.36
RAB40C-207ENST00000563109 TMEM262E9PQX1 116 aa12.82□□□□□ -0.36
RAB40C-207ENST00000563109 K7EP13 123 aa12.82□□□□□ -0.36
RAB40C-207ENST00000563109 IGHV3-30P01768 117 aa12.82□□□□□ -0.36
RAB40C-207ENST00000563109 IGHV3-33P01772 117 aa12.82□□□□□ -0.36
RAB40C-207ENST00000563109 IGHV3-30-3P0DP02 117 aa12.82□□□□□ -0.36
RAB40C-207ENST00000563109 IGHV3-30-5P0DP03 117 aa12.82□□□□□ -0.36
RAB40C-207ENST00000563109 NIT1Q86X76 327 aa12.82□□□□□ -0.36
RAB40C-207ENST00000563109 CHCHD7Q9BUK0 85 aa12.82□□□□□ -0.36
RAB40C-207ENST00000563109 LOC389332A0A1B0GUA5 103 aa12.81□□□□□ -0.36
RAB40C-207ENST00000563109 M0R2N4 97 aa12.81□□□□□ -0.36
RAB40C-207ENST00000563109 C10orf126Q8N4M7 172 aa12.81□□□□□ -0.36
RAB40C-207ENST00000563109 ALKBH7Q9BT30 221 aaPredicted RBP12.81□□□□□ -0.36
RAB40C-207ENST00000563109 PRSS47A8MTI9 375 aa12.8□□□□□ -0.36
RAB40C-207ENST00000563109 GAGE6Q13070 117 aa12.8□□□□□ -0.36
RAB40C-207ENST00000563109 RAB5AP20339 215 aa12.79□□□□□ -0.36
RAB40C-207ENST00000563109 NXT2Q9NPJ8 142 aaKnown RBP12.79□□□□□ -0.36
RAB40C-207ENST00000563109 DNAH6Q9C0G6 4158 aa12.78□□□□□ -0.36
RAB40C-207ENST00000563109 COLCA2A8K830 154 aa12.78□□□□□ -0.36
RAB40C-207ENST00000563109 H7C423 109 aa12.78□□□□□ -0.36
RAB40C-207ENST00000563109 Q8N8P6 123 aa12.78□□□□□ -0.36
RAB40C-207ENST00000563109 MPV17L2Q567V2 206 aa12.77□□□□□ -0.37
RAB40C-207ENST00000563109 AMMECR1LQ6DCA0 310 aa12.77□□□□□ -0.37
RAB40C-207ENST00000563109 Q6ZR54 194 aa12.77□□□□□ -0.37
RAB40C-207ENST00000563109 SACSQ9NZJ4 4579 aa12.76□□□□□ -0.37
RAB40C-207ENST00000563109 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.76□□□□□ -0.37
RAB40C-207ENST00000563109 IGKV2-29A2NJV5 120 aaPredicted RBP12.76□□□□□ -0.37
RAB40C-207ENST00000563109 ESDP10768 282 aa12.76□□□□□ -0.37
RAB40C-207ENST00000563109 SMAGPQ0VAQ4 97 aa12.76□□□□□ -0.37
RAB40C-207ENST00000563109 Q8N3U1 123 aa12.76□□□□□ -0.37
RAB40C-207ENST00000563109 PRSS3P2Q8NHM4 247 aa12.76□□□□□ -0.37
RAB40C-207ENST00000563109 TMEM18Q96B42 140 aa12.76□□□□□ -0.37
RAB40C-207ENST00000563109 KMT2CQ8NEZ4 4911 aaKnown RBP12.75□□□□□ -0.37
RAB40C-207ENST00000563109 K7EMI3 77 aa12.75□□□□□ -0.37
RAB40C-207ENST00000563109 KRTAP1-5Q9BYS1 174 aa12.75□□□□□ -0.37
RAB40C-207ENST00000563109 IFI27P40305 119 aaPredicted RBP12.74□□□□□ -0.37
RAB40C-207ENST00000563109 RBX1P62877 108 aa12.74□□□□□ -0.37
RAB40C-207ENST00000563109 LAGE3Q14657 143 aa12.74□□□□□ -0.37
RAB40C-207ENST00000563109 RNASEKQ6P5S7 137 aaKnown RBP12.74□□□□□ -0.37
RAB40C-207ENST00000563109 HYDINQ4G0P3 5121 aa12.73□□□□□ -0.37
RAB40C-207ENST00000563109 ANGP03950 147 aaKnown RBP12.73□□□□□ -0.37
RAB40C-207ENST00000563109 TRGC2P03986 189 aa12.73□□□□□ -0.37
RAB40C-207ENST00000563109 FGF6P10767 208 aa12.73□□□□□ -0.37
RAB40C-207ENST00000563109 BTF3P20290 206 aaKnown RBP12.73□□□□□ -0.37
RAB40C-207ENST00000563109 ORMDL2Q53FV1 153 aa12.73□□□□□ -0.37
RAB40C-207ENST00000563109 Q8N976 141 aa12.73□□□□□ -0.37
RAB40C-207ENST00000563109 TMEM101Q96IK0 257 aa12.73□□□□□ -0.37
RAB40C-207ENST00000563109 KLK12Q9UKR0 248 aa12.73□□□□□ -0.37
RAB40C-207ENST00000563109 A0A1B0GUV1 79 aa12.72□□□□□ -0.37
RAB40C-207ENST00000563109 IBA57-AS1B1ANH7 110 aa12.72□□□□□ -0.37
RAB40C-207ENST00000563109 CRPP02741 224 aa12.72□□□□□ -0.37
RAB40C-207ENST00000563109 ZNF25P17030 456 aaPredicted RBP12.72□□□□□ -0.37
RAB40C-207ENST00000563109 C1orf134Q5TEV5 83 aa12.72□□□□□ -0.37
RAB40C-207ENST00000563109 FA2HQ7L5A8 372 aa12.72□□□□□ -0.37
RAB40C-207ENST00000563109 C6orf223Q8N319 242 aa12.72□□□□□ -0.37
RAB40C-207ENST00000563109 C20orf203Q8NBC4 194 aa12.72□□□□□ -0.37
RAB40C-207ENST00000563109 RYR2Q92736 4967 aa12.71□□□□□ -0.37
RAB40C-207ENST00000563109 C18orf32Q8TCD1 76 aa12.71□□□□□ -0.37
RAB40C-207ENST00000563109 KMT2AQ03164 3969 aa12.71□□□□□ -0.38
RAB40C-207ENST00000563109 DGAT2L7PQ6IED9 249 aa12.7□□□□□ -0.38
RAB40C-207ENST00000563109 MRPL52Q86TS9 123 aaKnown RBP12.7□□□□□ -0.38
RAB40C-207ENST00000563109 NFE4Q86UQ8 179 aa12.7□□□□□ -0.38
RAB40C-207ENST00000563109 OR5A1Q8NGJ0 315 aa12.7□□□□□ -0.38
RAB40C-207ENST00000563109 TRAV8-3A0A0A6YYJ7 113 aa12.69□□□□□ -0.38
RAB40C-207ENST00000563109 G0S2P27469 103 aa12.69□□□□□ -0.38
RAB40C-207ENST00000563109 RAB5BP61020 215 aa12.69□□□□□ -0.38
RAB40C-207ENST00000563109 Q9HAA7 133 aa12.69□□□□□ -0.38
RAB40C-207ENST00000563109 IGLV4-60A0A075B6I1 120 aa12.68□□□□□ -0.38
RAB40C-207ENST00000563109 Q0VG73 95 aa12.68□□□□□ -0.38
RAB40C-207ENST00000563109 UBE2WQ96B02 151 aa12.68□□□□□ -0.38
RAB40C-207ENST00000563109 CYSLTR1Q9Y271 337 aa12.68□□□□□ -0.38
RAB40C-207ENST00000563109 RPL39P62891 51 aaKnown RBP12.67□□□□□ -0.38
RAB40C-207ENST00000563109 LINC00269Q8N2A0 174 aa12.67□□□□□ -0.38
RAB40C-207ENST00000563109 RMI2Q96E14 147 aa12.67□□□□□ -0.38
RAB40C-207ENST00000563109 TIMM21Q9BVV7 248 aa12.67□□□□□ -0.38
RAB40C-207ENST00000563109 SPANXA1Q9NS26 97 aa12.67□□□□□ -0.38
RAB40C-207ENST00000563109 AP5S1Q9NUS5 200 aa12.67□□□□□ -0.38
RAB40C-207ENST00000563109 UBE2D4Q9Y2X8 147 aa12.67□□□□□ -0.38
RAB40C-207ENST00000563109 LINC01546A6NGU7 62 aa12.66□□□□□ -0.38
RAB40C-207ENST00000563109 CLPSL2Q6UWE3 100 aa12.66□□□□□ -0.38
RAB40C-207ENST00000563109 LINC00614P0C842 121 aa12.65□□□□□ -0.38
RAB40C-207ENST00000563109 REG3AQ06141 175 aa12.65□□□□□ -0.38
RAB40C-207ENST00000563109 C2orf66Q6UXQ4 117 aa12.65□□□□□ -0.38
RAB40C-207ENST00000563109 CSDC2Q9Y534 153 aaKnown RBP12.65□□□□□ -0.38
RAB40C-207ENST00000563109 MIAQ16674 131 aa12.64□□□□□ -0.39
RAB40C-207ENST00000563109 BAGE3Q86Y29 109 aa12.64□□□□□ -0.39
RAB40C-207ENST00000563109 TM2D2Q9BX73 214 aa12.64□□□□□ -0.39
RAB40C-207ENST00000563109 PRR34Q9NV39 138 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms