RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 LYPD6BQ8NI32 183 aa9.27□□□□□ -0.93
SPG7-205ENST00000561945 RNF185Q96GF1 192 aa9.27□□□□□ -0.93
SPG7-205ENST00000561945 SLPIP03973 132 aa9.26□□□□□ -0.93
SPG7-205ENST00000561945 CACNG7P62955 275 aa9.26□□□□□ -0.93
SPG7-205ENST00000561945 IGLV4-60A0A075B6I1 120 aa9.25□□□□□ -0.93
SPG7-205ENST00000561945 RAB19A4D1S5 217 aa9.25□□□□□ -0.93
SPG7-205ENST00000561945 TMEM250H0YL14 139 aa9.25□□□□□ -0.93
SPG7-205ENST00000561945 RPS20P60866 119 aaKnown RBP9.25□□□□□ -0.93
SPG7-205ENST00000561945 FER1L6-AS1Q8NA97 138 aa9.25□□□□□ -0.93
SPG7-205ENST00000561945 EIF5A2Q9GZV4 153 aaKnown RBP9.25□□□□□ -0.93
SPG7-205ENST00000561945 GFRA4Q9GZZ7 299 aa9.25□□□□□ -0.93
SPG7-205ENST00000561945 F2Z2F3 143 aa9.24□□□□□ -0.93
SPG7-205ENST00000561945 RASL11AQ6T310 242 aa9.24□□□□□ -0.93
SPG7-205ENST00000561945 TEX261Q6UWH6 196 aa9.24□□□□□ -0.93
SPG7-205ENST00000561945 SPACA4Q8TDM5 124 aa9.24□□□□□ -0.93
SPG7-205ENST00000561945 TMEM243Q9BU79 118 aa9.24□□□□□ -0.93
SPG7-205ENST00000561945 IGLV10-54A0A075B6I4 117 aa9.23□□□□□ -0.93
SPG7-205ENST00000561945 IGHV3-64A0A075B6Q5 118 aa9.23□□□□□ -0.93
SPG7-205ENST00000561945 hDV102S1A0JD36 115 aa9.23□□□□□ -0.93
SPG7-205ENST00000561945 NDUFS6O75380 124 aaKnown RBP9.23□□□□□ -0.93
SPG7-205ENST00000561945 MGPP08493 103 aa9.23□□□□□ -0.93
SPG7-205ENST00000561945 SSTP61278 116 aa9.23□□□□□ -0.93
SPG7-205ENST00000561945 WDR73Q6P4I2 378 aa9.23□□□□□ -0.93
SPG7-205ENST00000561945 OR2D3Q8NGH3 330 aa9.23□□□□□ -0.93
SPG7-205ENST00000561945 NIT2Q9NQR4 276 aa9.23□□□□□ -0.93
SPG7-205ENST00000561945 PLAC8Q9NZF1 115 aa9.23□□□□□ -0.93
SPG7-205ENST00000561945 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.22□□□□□ -0.93
SPG7-205ENST00000561945 XKRY2A2RUG3 117 aa9.22□□□□□ -0.93
SPG7-205ENST00000561945 FAM210AQ96ND0 272 aa9.22□□□□□ -0.93
SPG7-205ENST00000561945 CNFNQ9BYD5 112 aa9.22□□□□□ -0.93
SPG7-205ENST00000561945 A0A087WYN8 130 aa9.21□□□□□ -0.94
SPG7-205ENST00000561945 TRGC1P0CF51 173 aa9.21□□□□□ -0.94
SPG7-205ENST00000561945 CEBPGP53567 150 aa9.21□□□□□ -0.94
SPG7-205ENST00000561945 C15orf56Q8N910 161 aa9.21□□□□□ -0.94
SPG7-205ENST00000561945 DPH3P1Q9H4G8 78 aa9.21□□□□□ -0.94
SPG7-205ENST00000561945 TRBV20OR9-2A0A075B6H5 130 aa9.2□□□□□ -0.94
SPG7-205ENST00000561945 NTF3P20783 257 aa9.2□□□□□ -0.94
SPG7-205ENST00000561945 CTRLP40313 264 aa9.2□□□□□ -0.94
SPG7-205ENST00000561945 TPPP3Q9BW30 176 aa9.2□□□□□ -0.94
SPG7-205ENST00000561945 AP5S1Q9NUS5 200 aa9.2□□□□□ -0.94
SPG7-205ENST00000561945 LYZL1Q6UWQ5 148 aa9.19□□□□□ -0.94
SPG7-205ENST00000561945 OCC1Q8TAD7 63 aa9.19□□□□□ -0.94
SPG7-205ENST00000561945 CHTF8P0CG12 524 aa9.18□□□□□ -0.94
SPG7-205ENST00000561945 COTL1Q14019 142 aa9.18□□□□□ -0.94
SPG7-205ENST00000561945 NUDT10Q8NFP7 164 aa9.18□□□□□ -0.94
SPG7-205ENST00000561945 NUDT11Q96G61 164 aa9.18□□□□□ -0.94
SPG7-205ENST00000561945 H7C423 109 aa9.17□□□□□ -0.94
SPG7-205ENST00000561945 SRP19P09132 144 aaKnown RBP9.17□□□□□ -0.94
SPG7-205ENST00000561945 AMTP48728 403 aa9.17□□□□□ -0.94
SPG7-205ENST00000561945 RAB14P61106 215 aa9.17□□□□□ -0.94
SPG7-205ENST00000561945 PEA15Q15121 130 aa9.17□□□□□ -0.94
SPG7-205ENST00000561945 CFAP161Q6P656 301 aa9.17□□□□□ -0.94
SPG7-205ENST00000561945 SMIM7Q9BQ49 75 aa9.17□□□□□ -0.94
SPG7-205ENST00000561945 ZNF727A8MUV8 499 aa9.16□□□□□ -0.94
SPG7-205ENST00000561945 UBE2L6O14933 153 aa9.16□□□□□ -0.94
SPG7-205ENST00000561945 NCR2O95944 276 aa9.16□□□□□ -0.94
SPG7-205ENST00000561945 GATD1Q8NB37 220 aa9.16□□□□□ -0.94
SPG7-205ENST00000561945 SMDT1Q9H4I9 107 aa9.16□□□□□ -0.94
SPG7-205ENST00000561945 GVQW2A0A096LPI5 108 aaPredicted RBP9.15□□□□□ -0.94
SPG7-205ENST00000561945 GAGE12HA6NDE8 117 aa9.15□□□□□ -0.94
SPG7-205ENST00000561945 GATCO43716 136 aaKnown RBP9.15□□□□□ -0.94
SPG7-205ENST00000561945 RPS10P46783 165 aaKnown RBP9.15□□□□□ -0.94
SPG7-205ENST00000561945 FAM74A3Q4VXF1 159 aa9.15□□□□□ -0.94
SPG7-205ENST00000561945 RPP21Q9H633 154 aaKnown RBP9.15□□□□□ -0.94
SPG7-205ENST00000561945 K7EN84 100 aa9.14□□□□□ -0.95
SPG7-205ENST00000561945 PHOX2AO14813 284 aa9.14□□□□□ -0.95
SPG7-205ENST00000561945 COX6A2Q02221 97 aa9.14□□□□□ -0.95
SPG7-205ENST00000561945 ODF1Q14990 250 aa9.14□□□□□ -0.95
SPG7-205ENST00000561945 LINC01600Q96MT4 127 aa9.14□□□□□ -0.95
SPG7-205ENST00000561945 RNASE7Q9H1E1 156 aaKnown RBP9.14□□□□□ -0.95
SPG7-205ENST00000561945 TWIST1Q15672 202 aa9.13□□□□□ -0.95
SPG7-205ENST00000561945 FAM231DQ6ZW35 169 aa9.13□□□□□ -0.95
SPG7-205ENST00000561945 C7orf33Q8WU49 177 aa9.13□□□□□ -0.95
SPG7-205ENST00000561945 CHCHD10Q8WYQ3 142 aaPredicted RBP9.13□□□□□ -0.95
SPG7-205ENST00000561945 DPH3Q96FX2 82 aa9.13□□□□□ -0.95
SPG7-205ENST00000561945 A8MWL6 223 aa9.12□□□□□ -0.95
SPG7-205ENST00000561945 PRR3P79522 188 aaKnown RBP9.12□□□□□ -0.95
SPG7-205ENST00000561945 TMEM241Q24JQ0 296 aa9.12□□□□□ -0.95
SPG7-205ENST00000561945 PRSS3P2Q8NHM4 247 aa9.12□□□□□ -0.95
SPG7-205ENST00000561945 TRAV26-2A0A0B4J265 109 aa9.11□□□□□ -0.95
SPG7-205ENST00000561945 ZNF25P17030 456 aaPredicted RBP9.11□□□□□ -0.95
SPG7-205ENST00000561945 FOXI1Q12951 378 aa9.11□□□□□ -0.95
SPG7-205ENST00000561945 LINC01551Q86U37 167 aa9.11□□□□□ -0.95
SPG7-205ENST00000561945 GTSF1Q8WW33 167 aa9.11□□□□□ -0.95
SPG7-205ENST00000561945 TRBV6-5A0A0K0K1A5 114 aa9.1□□□□□ -0.95
SPG7-205ENST00000561945 FGF6P10767 208 aa9.1□□□□□ -0.95
SPG7-205ENST00000561945 CT83Q5H943 113 aa9.1□□□□□ -0.95
SPG7-205ENST00000561945 OR5A1Q8NGJ0 315 aa9.1□□□□□ -0.95
SPG7-205ENST00000561945 RPL39LQ96EH5 51 aaKnown RBP9.1□□□□□ -0.95
SPG7-205ENST00000561945 OSTCQ9NRP0 149 aa9.1□□□□□ -0.95
SPG7-205ENST00000561945 FAM231BA6NCW3 169 aa9.09□□□□□ -0.95
SPG7-205ENST00000561945 APCSP02743 223 aa9.09□□□□□ -0.95
SPG7-205ENST00000561945 HIGD2BQ4VC39 106 aa9.09□□□□□ -0.95
SPG7-205ENST00000561945 AMMECR1LQ6DCA0 310 aa9.09□□□□□ -0.95
SPG7-205ENST00000561945 SMIM15Q7Z3B0 74 aa9.09□□□□□ -0.95
SPG7-205ENST00000561945 BORCS7Q96B45 105 aa9.09□□□□□ -0.95
SPG7-205ENST00000561945 NAT8Q9UHE5 227 aa9.09□□□□□ -0.95
SPG7-205ENST00000561945 LPAP08519 4548 aa9.09□□□□□ -0.95
SPG7-205ENST00000561945 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.08□□□□□ -0.96
SPG7-205ENST00000561945 A0A096LNI7 61 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms