RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 HRNRQ86YZ3 2850 aaPredicted RBP0.08□□□□□ -2.4
CHD9-204ENST00000561869 IFT172Q9UG01 1749 aa0.07□□□□□ -2.4
CHD9-204ENST00000561869 HIVEP3Q5T1R4 2406 aa0.07□□□□□ -2.4
CHD9-204ENST00000561869 DMBT1Q9UGM3 2413 aaPredicted RBP0.07□□□□□ -2.4
CHD9-204ENST00000561869 CSMD3Q7Z407 3707 aa0.07□□□□□ -2.4
CHD9-204ENST00000561869 TRAV1-2A0A0B4J238 106 aa0.07□□□□□ -2.4
CHD9-204ENST00000561869 LOC100130705A0A1B0GUX0 176 aa0.07□□□□□ -2.4
CHD9-204ENST00000561869 EFCAB10A6NFE3 127 aa0.07□□□□□ -2.4
CHD9-204ENST00000561869 PIN1P1O15428 100 aa0.07□□□□□ -2.4
CHD9-204ENST00000561869 GCHFRP30047 84 aa0.07□□□□□ -2.4
CHD9-204ENST00000561869 Q5BKY6 102 aa0.07□□□□□ -2.4
CHD9-204ENST00000561869 MEIG1Q5JSS6 88 aa0.07□□□□□ -2.4
CHD9-204ENST00000561869 BAGE3Q86Y29 109 aa0.07□□□□□ -2.4
CHD9-204ENST00000561869 AHCTF1Q8WYP5 2266 aa0.07□□□□□ -2.4
CHD9-204ENST00000561869 PI4KAP42356 2102 aa0.07□□□□□ -2.4
CHD9-204ENST00000561869 CACNA1CQ13936 2221 aa0.06□□□□□ -2.4
CHD9-204ENST00000561869 NAIPQ13075 1403 aa0.06□□□□□ -2.4
CHD9-204ENST00000561869 QRICH2Q9H0J4 1663 aa0.06□□□□□ -2.4
CHD9-204ENST00000561869 A2ML1A8K2U0 1454 aa0.06□□□□□ -2.4
CHD9-204ENST00000561869 MRC1P22897 1456 aa0.06□□□□□ -2.4
CHD9-204ENST00000561869 PIGBOS1A0A0B4J2F0 54 aa0.06□□□□□ -2.4
CHD9-204ENST00000561869 FAM25AB3EWG3 89 aa0.06□□□□□ -2.4
CHD9-204ENST00000561869 FAM25CB3EWG5 89 aa0.06□□□□□ -2.4
CHD9-204ENST00000561869 FAM25GB3EWG6 89 aa0.06□□□□□ -2.4
CHD9-204ENST00000561869 RBM3P98179 157 aaKnown RBP0.06□□□□□ -2.4
CHD9-204ENST00000561869 Q56UQ5 140 aa0.06□□□□□ -2.4
CHD9-204ENST00000561869 LENEPQ9Y5L5 61 aa0.06□□□□□ -2.4
CHD9-204ENST00000561869 UBR5O95071 2799 aaPredicted RBP0.06□□□□□ -2.4
CHD9-204ENST00000561869 PRDM2Q13029 1718 aa0.06□□□□□ -2.4
CHD9-204ENST00000561869 C2CD3Q4AC94 2353 aa0.06□□□□□ -2.4
CHD9-204ENST00000561869 PATJQ8NI35 1801 aa0.06□□□□□ -2.4
CHD9-204ENST00000561869 ZNF609O15014 1411 aa0.05□□□□□ -2.4
CHD9-204ENST00000561869 PPIP5K1Q6PFW1 1433 aa0.05□□□□□ -2.4
CHD9-204ENST00000561869 MYH7P12883 1935 aa0.05□□□□□ -2.4
CHD9-204ENST00000561869 PPP1R17O96001 155 aa0.05□□□□□ -2.4
CHD9-204ENST00000561869 UBE2DNLQ8IWF7 75 aa0.05□□□□□ -2.4
CHD9-204ENST00000561869 AMELXQ99217 191 aa0.05□□□□□ -2.4
CHD9-204ENST00000561869 R4GMQ9 66 aa0.05□□□□□ -2.4
CHD9-204ENST00000561869 DOCK1Q14185 1865 aa0.05□□□□□ -2.4
CHD9-204ENST00000561869 ZNF292O60281 2723 aa0.05□□□□□ -2.4
CHD9-204ENST00000561869 ARAP2Q8WZ64 1704 aa0.04□□□□□ -2.4
CHD9-204ENST00000561869 ZNF815PA8K554 130 aa0.04□□□□□ -2.4
CHD9-204ENST00000561869 M0R135 149 aa0.04□□□□□ -2.4
CHD9-204ENST00000561869 SPINK1P00995 79 aa0.04□□□□□ -2.4
CHD9-204ENST00000561869 SMIM6P0DI80 62 aa0.04□□□□□ -2.4
CHD9-204ENST00000561869 C10orf128Q5T292 105 aa0.04□□□□□ -2.4
CHD9-204ENST00000561869 CFAP126Q5VTH2 177 aa0.04□□□□□ -2.4
CHD9-204ENST00000561869 RPL13AP3Q6NVV1 102 aa0.04□□□□□ -2.4
CHD9-204ENST00000561869 SSBP3-AS1Q7Z2R9 100 aa0.04□□□□□ -2.4
CHD9-204ENST00000561869 PP6455Q8WZ26 134 aa0.04□□□□□ -2.4
CHD9-204ENST00000561869 PPP3R2Q96LZ3 170 aa0.04□□□□□ -2.4
CHD9-204ENST00000561869 AQP10Q96PS8 301 aa0.04□□□□□ -2.4
CHD9-204ENST00000561869 SPANXDQ9BXN6 97 aa0.04□□□□□ -2.4
CHD9-204ENST00000561869 CNFNQ9BYD5 112 aa0.04□□□□□ -2.4
CHD9-204ENST00000561869 CYP4F30PQ9H0H9 118 aa0.04□□□□□ -2.4
CHD9-204ENST00000561869 COL7A1Q02388 2944 aa0.04□□□□□ -2.4
CHD9-204ENST00000561869 SHROOM2Q13796 1616 aa0.04□□□□□ -2.4
CHD9-204ENST00000561869 ROCK2O75116 1388 aaKnown RBP0.04□□□□□ -2.4
CHD9-204ENST00000561869 NALCNQ8IZF0 1738 aa0.04□□□□□ -2.4
CHD9-204ENST00000561869 NCOR1O75376 2440 aa0.04□□□□□ -2.4
CHD9-204ENST00000561869 CPSF1Q10570 1443 aaKnown RBP0.04□□□□□ -2.4
CHD9-204ENST00000561869 KMT2AQ03164 3969 aa0.04□□□□□ -2.4
CHD9-204ENST00000561869 PCLOQ9Y6V0 5065 aa0.04□□□□□ -2.4
CHD9-204ENST00000561869 AKAP6Q13023 2319 aa0.03□□□□□ -2.4
CHD9-204ENST00000561869 MIF4GDA9UHW6 222 aaKnown RBP0.03□□□□□ -2.4
CHD9-204ENST00000561869 TNFP01375 233 aa0.03□□□□□ -2.4
CHD9-204ENST00000561869 SPINK8P0C7L1 97 aa0.03□□□□□ -2.4
CHD9-204ENST00000561869 SARNPP82979 210 aaKnown RBP0.03□□□□□ -2.4
CHD9-204ENST00000561869 COMMD6Q7Z4G1 85 aa0.03□□□□□ -2.4
CHD9-204ENST00000561869 C5orf38Q86SI9 138 aa0.03□□□□□ -2.4
CHD9-204ENST00000561869 C8orf59Q8N0T1 100 aaPredicted RBP0.03□□□□□ -2.4
CHD9-204ENST00000561869 TTC9CQ8N5M4 171 aa0.03□□□□□ -2.4
CHD9-204ENST00000561869 NDUFA4L2Q9NRX3 87 aa0.03□□□□□ -2.4
CHD9-204ENST00000561869 KMT2CQ8NEZ4 4911 aaKnown RBP0.03□□□□□ -2.4
CHD9-204ENST00000561869 ABCA2Q9BZC7 2435 aa0.03□□□□□ -2.41
CHD9-204ENST00000561869 LAMC1P11047 1609 aa0.02□□□□□ -2.41
CHD9-204ENST00000561869 BIVM-ERCC5R4GMW8 1640 aa0.02□□□□□ -2.41
CHD9-204ENST00000561869 LRRC37A2A6NM11 1700 aa0.02□□□□□ -2.41
CHD9-204ENST00000561869 KDM3BQ7LBC6 1761 aa0.02□□□□□ -2.41
CHD9-204ENST00000561869 A0A0D9SFI3 127 aa0.02□□□□□ -2.41
CHD9-204ENST00000561869 DLEU1O43261 78 aa0.02□□□□□ -2.41
CHD9-204ENST00000561869 SSSCA1O60232 199 aa0.02□□□□□ -2.41
CHD9-204ENST00000561869 APOC2P02655 101 aa0.02□□□□□ -2.41
CHD9-204ENST00000561869 AKAIN1P0CW23 69 aa0.02□□□□□ -2.41
CHD9-204ENST00000561869 SPAG11BQ08648 103 aa0.02□□□□□ -2.41
CHD9-204ENST00000561869 CATR1Q13166 79 aa0.02□□□□□ -2.41
CHD9-204ENST00000561869 SPAG11AQ6PDA7 123 aa0.02□□□□□ -2.41
CHD9-204ENST00000561869 FAM213BQ8TBF2 198 aa0.02□□□□□ -2.41
CHD9-204ENST00000561869 SMIM4Q8WVI0 70 aa0.02□□□□□ -2.41
CHD9-204ENST00000561869 LINC00472Q9H8W2 130 aa0.02□□□□□ -2.41
CHD9-204ENST00000561869 SCN3BQ9NY72 215 aa0.02□□□□□ -2.41
CHD9-204ENST00000561869 MYH8P13535 1937 aa0.02□□□□□ -2.41
CHD9-204ENST00000561869 MUC12Q9UKN1 5478 aa0.02□□□□□ -2.41
CHD9-204ENST00000561869 ZFHX3Q15911 3703 aa0.02□□□□□ -2.41
CHD9-204ENST00000561869 WNK2Q9Y3S1 2297 aa0.02□□□□□ -2.41
CHD9-204ENST00000561869 PLCE1Q9P212 2302 aa0.02□□□□□ -2.41
CHD9-204ENST00000561869 RIMS1Q86UR5 1692 aaKnown RBP0.02□□□□□ -2.41
CHD9-204ENST00000561869 HUWE1Q7Z6Z7 4374 aaKnown RBP0.01□□□□□ -2.41
CHD9-204ENST00000561869 DOCK2Q92608 1830 aa0.01□□□□□ -2.41
CHD9-204ENST00000561869 COL6A3P12111 3177 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms