RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 SLC39A9Q9NUM3 307 aa1.98□□□□□ -2.09
HERC1-215ENST00000561436 TMEM14CQ9P0S9 112 aa1.98□□□□□ -2.09
HERC1-215ENST00000561436 LENEPQ9Y5L5 61 aa1.98□□□□□ -2.09
HERC1-215ENST00000561436 DNAH5Q8TE73 4624 aa1.98□□□□□ -2.09
HERC1-215ENST00000561436 IGKV1OR2-108A0A075B7D4 117 aa1.97□□□□□ -2.09
HERC1-215ENST00000561436 TRAV4A0A0B4J268 109 aa1.97□□□□□ -2.09
HERC1-215ENST00000561436 A0A0D9SG52 128 aa1.97□□□□□ -2.09
HERC1-215ENST00000561436 A0A1B0GW15 77 aa1.97□□□□□ -2.09
HERC1-215ENST00000561436 RBAKDNA6NC62 111 aa1.97□□□□□ -2.09
HERC1-215ENST00000561436 GGTLC3B5MD39 225 aa1.97□□□□□ -2.09
HERC1-215ENST00000561436 PRM2P04554 102 aa1.97□□□□□ -2.09
HERC1-215ENST00000561436 AKAIN1P0CW23 69 aa1.97□□□□□ -2.09
HERC1-215ENST00000561436 IGLC2P0DOY2 106 aa1.97□□□□□ -2.09
HERC1-215ENST00000561436 AP3S2P59780 193 aa1.97□□□□□ -2.09
HERC1-215ENST00000561436 DEFB1P60022 68 aa1.97□□□□□ -2.09
HERC1-215ENST00000561436 PKIAP61925 76 aa1.97□□□□□ -2.09
HERC1-215ENST00000561436 AKR1C1Q04828 323 aa1.97□□□□□ -2.09
HERC1-215ENST00000561436 ZNF846Q147U1 533 aa1.97□□□□□ -2.09
HERC1-215ENST00000561436 SCGB2B2Q4G0G5 96 aa1.97□□□□□ -2.09
HERC1-215ENST00000561436 TMEM128Q5BJH2 165 aa1.97□□□□□ -2.09
HERC1-215ENST00000561436 OR10P1Q8NGE3 313 aa1.97□□□□□ -2.09
HERC1-215ENST00000561436 LHFPL5Q8TAF8 219 aa1.97□□□□□ -2.09
HERC1-215ENST00000561436 C2orf50Q96LR7 162 aa1.97□□□□□ -2.09
HERC1-215ENST00000561436 CNBD2Q96M20 576 aa1.97□□□□□ -2.09
HERC1-215ENST00000561436 PFDN5Q99471 154 aa1.97□□□□□ -2.09
HERC1-215ENST00000561436 SLC25A21Q9BQT8 299 aaPredicted RBP1.97□□□□□ -2.09
HERC1-215ENST00000561436 RSL24D1Q9UHA3 163 aaKnown RBP1.97□□□□□ -2.09
HERC1-215ENST00000561436 KIAA2026Q5HYC2 2103 aa1.97□□□□□ -2.09
HERC1-215ENST00000561436 FAT4Q6V0I7 4981 aa1.96□□□□□ -2.1
HERC1-215ENST00000561436 DNAH17Q9UFH2 4485 aa1.96□□□□□ -2.1
HERC1-215ENST00000561436 PKD1P98161 4303 aa1.96□□□□□ -2.1
HERC1-215ENST00000561436 TRBV19A0A075B6N1 114 aa1.96□□□□□ -2.1
HERC1-215ENST00000561436 TRAV12-3A0A0B4J271 114 aa1.96□□□□□ -2.1
HERC1-215ENST00000561436 RBFOX3A6NFN3 312 aa1.96□□□□□ -2.1
HERC1-215ENST00000561436 FAM25AB3EWG3 89 aa1.96□□□□□ -2.1
HERC1-215ENST00000561436 FAM25CB3EWG5 89 aa1.96□□□□□ -2.1
HERC1-215ENST00000561436 FAM25GB3EWG6 89 aa1.96□□□□□ -2.1
HERC1-215ENST00000561436 M0R2P5 195 aa1.96□□□□□ -2.1
HERC1-215ENST00000561436 IGKV4-1P06312 121 aa1.96□□□□□ -2.1
HERC1-215ENST00000561436 GPX1P07203 203 aa1.96□□□□□ -2.1
HERC1-215ENST00000561436 OR5G3P0C626 314 aa1.96□□□□□ -2.1
HERC1-215ENST00000561436 MGST1P10620 155 aaKnown RBP1.96□□□□□ -2.1
HERC1-215ENST00000561436 FAUP35544 74 aaKnown RBP1.96□□□□□ -2.1
HERC1-215ENST00000561436 RPL37AP61513 92 aaKnown RBP1.96□□□□□ -2.1
HERC1-215ENST00000561436 RPL19P84098 196 aaKnown RBP1.96□□□□□ -2.1
HERC1-215ENST00000561436 Q0VG73 95 aa1.96□□□□□ -2.1
HERC1-215ENST00000561436 RHOHQ15669 191 aa1.96□□□□□ -2.1
HERC1-215ENST00000561436 TMEM78Q5T7P6 136 aa1.96□□□□□ -2.1
HERC1-215ENST00000561436 IZUMO2Q6UXV1 221 aa1.96□□□□□ -2.1
HERC1-215ENST00000561436 TMEM136Q6ZRR5 245 aa1.96□□□□□ -2.1
HERC1-215ENST00000561436 SCXQ7RTU7 201 aa1.96□□□□□ -2.1
HERC1-215ENST00000561436 LINC00305Q7Z4B0 112 aa1.96□□□□□ -2.1
HERC1-215ENST00000561436 LYZL2Q7Z4W2 148 aa1.96□□□□□ -2.1
HERC1-215ENST00000561436 PRNTQ86SH4 94 aa1.96□□□□□ -2.1
HERC1-215ENST00000561436 WFDC10BQ8IUB3 73 aa1.96□□□□□ -2.1
HERC1-215ENST00000561436 SNX29P2Q8IUI4 249 aa1.96□□□□□ -2.1
HERC1-215ENST00000561436 LINC00337Q8N6G1 96 aa1.96□□□□□ -2.1
HERC1-215ENST00000561436 SMIM4Q8WVI0 70 aa1.96□□□□□ -2.1
HERC1-215ENST00000561436 GTSF1LQ9H1H1 148 aa1.96□□□□□ -2.1
HERC1-215ENST00000561436 COMMD3Q9UBI1 195 aa1.96□□□□□ -2.1
HERC1-215ENST00000561436 DMBT1Q9UGM3 2413 aaPredicted RBP1.96□□□□□ -2.1
HERC1-215ENST00000561436 A0A087WXM4 84 aa1.95□□□□□ -2.1
HERC1-215ENST00000561436 PGPA6NDG6 321 aa1.95□□□□□ -2.1
HERC1-215ENST00000561436 OR10J4P0C629 311 aa1.95□□□□□ -2.1
HERC1-215ENST00000561436 MT1HL1P0DM35 61 aa1.95□□□□□ -2.1
HERC1-215ENST00000561436 RNASE4P34096 147 aaKnown RBP1.95□□□□□ -2.1
HERC1-215ENST00000561436 CSN1S1P47710 185 aa1.95□□□□□ -2.1
HERC1-215ENST00000561436 INPP1P49441 399 aa1.95□□□□□ -2.1
HERC1-215ENST00000561436 OR10J3Q5JRS4 329 aa1.95□□□□□ -2.1
HERC1-215ENST00000561436 SPANXN5Q5MJ07 72 aa1.95□□□□□ -2.1
HERC1-215ENST00000561436 C10orf113Q5VZT2 155 aa1.95□□□□□ -2.1
HERC1-215ENST00000561436 Q6AWC8 147 aa1.95□□□□□ -2.1
HERC1-215ENST00000561436 TMEM14EPQ6UXP3 125 aa1.95□□□□□ -2.1
HERC1-215ENST00000561436 PATE2Q6UY27 113 aa1.95□□□□□ -2.1
HERC1-215ENST00000561436 CLVS1Q8IUQ0 354 aaPredicted RBP1.95□□□□□ -2.1
HERC1-215ENST00000561436 ZFAND2AQ8N6M9 145 aa1.95□□□□□ -2.1
HERC1-215ENST00000561436 LINC00304Q8N9R0 145 aa1.95□□□□□ -2.1
HERC1-215ENST00000561436 LINC01600Q96MT4 127 aa1.95□□□□□ -2.1
HERC1-215ENST00000561436 ARL6Q9H0F7 186 aa1.95□□□□□ -2.1
HERC1-215ENST00000561436 AGPAT4-IT1Q9H0P7 198 aa1.95□□□□□ -2.1
HERC1-215ENST00000561436 DPH3P1Q9H4G8 78 aa1.95□□□□□ -2.1
HERC1-215ENST00000561436 LYRM2Q9NU23 88 aaPredicted RBP1.95□□□□□ -2.1
HERC1-215ENST00000561436 PSENENQ9NZ42 101 aa1.95□□□□□ -2.1
HERC1-215ENST00000561436 ZNF492Q9P255 531 aa1.95□□□□□ -2.1
HERC1-215ENST00000561436 PKIGQ9Y2B9 76 aa1.95□□□□□ -2.1
HERC1-215ENST00000561436 TIMM9Q9Y5J7 89 aa1.95□□□□□ -2.1
HERC1-215ENST00000561436 APOBP04114 4563 aaKnown RBP1.95□□□□□ -2.1
HERC1-215ENST00000561436 DSCAML1Q8TD84 2053 aa1.95□□□□□ -2.1
HERC1-215ENST00000561436 HMCN2Q8NDA2 5059 aa1.95□□□□□ -2.1
HERC1-215ENST00000561436 TRAV21A0A0B4J279 112 aa1.94□□□□□ -2.1
HERC1-215ENST00000561436 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.94□□□□□ -2.1
HERC1-215ENST00000561436 H3BQ15 152 aa1.94□□□□□ -2.1
HERC1-215ENST00000561436 HPGDSO60760 199 aa1.94□□□□□ -2.1
HERC1-215ENST00000561436 SFT2D2O95562 160 aa1.94□□□□□ -2.1
HERC1-215ENST00000561436 IGLV6-57P01721 117 aa1.94□□□□□ -2.1
HERC1-215ENST00000561436 GZMBP10144 247 aa1.94□□□□□ -2.1
HERC1-215ENST00000561436 S100A11P31949 105 aa1.94□□□□□ -2.1
HERC1-215ENST00000561436 FUSP35637 526 aaKnown RBP eCLIP1.94□□□□□ -2.1
HERC1-215ENST00000561436 CIRBPQ14011 172 aaKnown RBP1.94□□□□□ -2.1
HERC1-215ENST00000561436 TMEM241Q24JQ0 296 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms