RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 TMEM243Q9BU79 118 aa9.2□□□□□ -0.94
TPM1-230ENST00000561266 TRAV8-3A0A0A6YYJ7 113 aa9.19□□□□□ -0.94
TPM1-230ENST00000561266 PSCAO43653 123 aa9.19□□□□□ -0.94
TPM1-230ENST00000561266 ANGP03950 147 aaKnown RBP9.19□□□□□ -0.94
TPM1-230ENST00000561266 POLR2KP53803 58 aaKnown RBP9.19□□□□□ -0.94
TPM1-230ENST00000561266 COTL1Q14019 142 aa9.19□□□□□ -0.94
TPM1-230ENST00000561266 KRTAP26-1Q6PEX3 210 aa9.19□□□□□ -0.94
TPM1-230ENST00000561266 UQCC3Q6UW78 93 aa9.19□□□□□ -0.94
TPM1-230ENST00000561266 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.19□□□□□ -0.94
TPM1-230ENST00000561266 TMEM70Q9BUB7 260 aa9.19□□□□□ -0.94
TPM1-230ENST00000561266 APOBP04114 4563 aaKnown RBP9.19□□□□□ -0.94
TPM1-230ENST00000561266 HSPG2P98160 4391 aa9.19□□□□□ -0.94
TPM1-230ENST00000561266 IGKV2D-24A0A075B6R9 120 aa9.18□□□□□ -0.94
TPM1-230ENST00000561266 LINC00862A6NCI5 91 aa9.18□□□□□ -0.94
TPM1-230ENST00000561266 TSHBP01222 138 aa9.18□□□□□ -0.94
TPM1-230ENST00000561266 AMTP48728 403 aa9.18□□□□□ -0.94
TPM1-230ENST00000561266 PNRC1Q12796 327 aaPredicted RBP9.18□□□□□ -0.94
TPM1-230ENST00000561266 KCNIP4Q6PIL6 250 aa9.18□□□□□ -0.94
TPM1-230ENST00000561266 BAALCQ8WXS3 180 aa9.18□□□□□ -0.94
TPM1-230ENST00000561266 MRAP2Q96G30 205 aa9.18□□□□□ -0.94
TPM1-230ENST00000561266 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.17□□□□□ -0.94
TPM1-230ENST00000561266 IGKV2-29A2NJV5 120 aaPredicted RBP9.17□□□□□ -0.94
TPM1-230ENST00000561266 LINC00269Q8N2A0 174 aa9.17□□□□□ -0.94
TPM1-230ENST00000561266 ST20Q9HBF5 79 aa9.17□□□□□ -0.94
TPM1-230ENST00000561266 PRR34Q9NV39 138 aa9.17□□□□□ -0.94
TPM1-230ENST00000561266 TMEM242Q9NWH2 141 aa9.17□□□□□ -0.94
TPM1-230ENST00000561266 F8W036 122 aa9.16□□□□□ -0.94
TPM1-230ENST00000561266 PPP1R2P9O14990 202 aa9.16□□□□□ -0.94
TPM1-230ENST00000561266 MT-ND4LP03901 98 aa9.16□□□□□ -0.94
TPM1-230ENST00000561266 PMCHP20382 165 aa9.16□□□□□ -0.94
TPM1-230ENST00000561266 KRTAP10-1P60331 282 aa9.16□□□□□ -0.94
TPM1-230ENST00000561266 HBBP68871 147 aa9.16□□□□□ -0.94
TPM1-230ENST00000561266 ELOBQ15370 118 aa9.16□□□□□ -0.94
TPM1-230ENST00000561266 Q8N814 137 aa9.16□□□□□ -0.94
TPM1-230ENST00000561266 ANAPC16Q96DE5 110 aa9.16□□□□□ -0.94
TPM1-230ENST00000561266 TM2D2Q9BX73 214 aa9.16□□□□□ -0.94
TPM1-230ENST00000561266 RYR1P21817 5038 aa9.15□□□□□ -0.94
TPM1-230ENST00000561266 A0A1B0GUV1 79 aa9.15□□□□□ -0.94
TPM1-230ENST00000561266 I3L3M4 83 aa9.15□□□□□ -0.94
TPM1-230ENST00000561266 ESDP10768 282 aa9.15□□□□□ -0.94
TPM1-230ENST00000561266 PGPEP1Q9NXJ5 209 aa9.15□□□□□ -0.94
TPM1-230ENST00000561266 TRBV27A0A0K0K1C4 114 aa9.14□□□□□ -0.95
TPM1-230ENST00000561266 A0A1B0GW15 77 aa9.14□□□□□ -0.95
TPM1-230ENST00000561266 EREGO14944 169 aa9.14□□□□□ -0.95
TPM1-230ENST00000561266 Q0VG73 95 aa9.14□□□□□ -0.95
TPM1-230ENST00000561266 C10orf91Q5T1B1 145 aa9.14□□□□□ -0.95
TPM1-230ENST00000561266 SEC11CQ9BY50 192 aa9.14□□□□□ -0.95
TPM1-230ENST00000561266 IGLV10-54A0A075B6I4 117 aa9.13□□□□□ -0.95
TPM1-230ENST00000561266 D6R8Y8 96 aa9.13□□□□□ -0.95
TPM1-230ENST00000561266 NPYP01303 97 aa9.13□□□□□ -0.95
TPM1-230ENST00000561266 APCSP02743 223 aa9.13□□□□□ -0.95
TPM1-230ENST00000561266 PKIAP61925 76 aa9.13□□□□□ -0.95
TPM1-230ENST00000561266 REG3AQ06141 175 aa9.13□□□□□ -0.95
TPM1-230ENST00000561266 TRBV24-1A0A075B6N3 115 aa9.12□□□□□ -0.95
TPM1-230ENST00000561266 UBE2L6O14933 153 aa9.12□□□□□ -0.95
TPM1-230ENST00000561266 TNFRSF6BO95407 300 aa9.12□□□□□ -0.95
TPM1-230ENST00000561266 CRPP02741 224 aa9.12□□□□□ -0.95
TPM1-230ENST00000561266 CKS2P33552 79 aa9.12□□□□□ -0.95
TPM1-230ENST00000561266 SUMO2P61956 95 aaKnown RBP9.12□□□□□ -0.95
TPM1-230ENST00000561266 ATP5L2Q7Z4Y8 100 aa9.12□□□□□ -0.95
TPM1-230ENST00000561266 NTN5Q8WTR8 489 aaPredicted RBP9.12□□□□□ -0.95
TPM1-230ENST00000561266 RMI2Q96E14 147 aa9.12□□□□□ -0.95
TPM1-230ENST00000561266 C1orf43Q9BWL3 253 aa9.12□□□□□ -0.95
TPM1-230ENST00000561266 KRTAP4-5Q9BYR2 181 aa9.12□□□□□ -0.95
TPM1-230ENST00000561266 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.11□□□□□ -0.95
TPM1-230ENST00000561266 FGF6P10767 208 aa9.11□□□□□ -0.95
TPM1-230ENST00000561266 MIAQ16674 131 aa9.11□□□□□ -0.95
TPM1-230ENST00000561266 CDPF1Q6NVV7 123 aa9.11□□□□□ -0.95
TPM1-230ENST00000561266 DNAH8Q96JB1 4490 aa9.1□□□□□ -0.95
TPM1-230ENST00000561266 VCYO14598 125 aa9.1□□□□□ -0.95
TPM1-230ENST00000561266 LINC01620Q4KN68 170 aa9.1□□□□□ -0.95
TPM1-230ENST00000561266 RNASEKQ6P5S7 137 aaKnown RBP9.1□□□□□ -0.95
TPM1-230ENST00000561266 CARHSP1Q9Y2V2 147 aaKnown RBP9.1□□□□□ -0.95
TPM1-230ENST00000561266 COX11Q9Y6N1 276 aa9.1□□□□□ -0.95
TPM1-230ENST00000561266 IGLV5-52A0A0A0MRZ9 124 aa9.09□□□□□ -0.95
TPM1-230ENST00000561266 IGKV3OR2-268A0A0C4DH90 116 aa9.09□□□□□ -0.95
TPM1-230ENST00000561266 C7orf77A4D0Y5 90 aa9.09□□□□□ -0.95
TPM1-230ENST00000561266 CDK2AP2O75956 126 aa9.09□□□□□ -0.95
TPM1-230ENST00000561266 HLA-DQA1P01909 254 aa9.09□□□□□ -0.95
TPM1-230ENST00000561266 S100A8P05109 93 aa9.09□□□□□ -0.95
TPM1-230ENST00000561266 GCSHP23434 173 aa9.09□□□□□ -0.95
TPM1-230ENST00000561266 XGP55808 180 aa9.09□□□□□ -0.95
TPM1-230ENST00000561266 FAM30AQ9NZY2 134 aa9.09□□□□□ -0.95
TPM1-230ENST00000561266 USP17L23D6RBM5 183 aa9.08□□□□□ -0.96
TPM1-230ENST00000561266 H7C423 109 aa9.08□□□□□ -0.96
TPM1-230ENST00000561266 HAMPP81172 84 aa9.08□□□□□ -0.96
TPM1-230ENST00000561266 TMEM136Q6ZRR5 245 aa9.08□□□□□ -0.96
TPM1-230ENST00000561266 FAM104AQ969W3 186 aa9.08□□□□□ -0.96
TPM1-230ENST00000561266 BTF3L4Q96K17 158 aa9.08□□□□□ -0.96
TPM1-230ENST00000561266 C20orf78Q9BR46 151 aa9.08□□□□□ -0.96
TPM1-230ENST00000561266 TCAPO15273 167 aa9.07□□□□□ -0.96
TPM1-230ENST00000561266 PPP1R17O96001 155 aa9.07□□□□□ -0.96
TPM1-230ENST00000561266 RPL32P62910 135 aaKnown RBP9.07□□□□□ -0.96
TPM1-230ENST00000561266 AMMECR1LQ6DCA0 310 aa9.07□□□□□ -0.96
TPM1-230ENST00000561266 CLRN3Q8NCR9 226 aa9.07□□□□□ -0.96
TPM1-230ENST00000561266 PRELID3AQ96N28 172 aa9.07□□□□□ -0.96
TPM1-230ENST00000561266 IMMP2LQ96T52 175 aa9.07□□□□□ -0.96
TPM1-230ENST00000561266 SMIM2Q9BVW6 85 aa9.07□□□□□ -0.96
TPM1-230ENST00000561266 CTDSP1Q9GZU7 261 aa9.07□□□□□ -0.96
TPM1-230ENST00000561266 PRSS1P07477 247 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms