RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 H7C423 109 aa7.34□□□□□ -1.23
TPM1-229ENST00000561242 TNFRSF6BO95407 300 aa7.34□□□□□ -1.23
TPM1-229ENST00000561242 SLC7A5P1Q8MH63 180 aa7.34□□□□□ -1.23
TPM1-229ENST00000561242 PRSS3P2Q8NHM4 247 aa7.34□□□□□ -1.23
TPM1-229ENST00000561242 LOC389332A0A1B0GUA5 103 aa7.33□□□□□ -1.24
TPM1-229ENST00000561242 SMKR1H3BMG3 65 aa7.33□□□□□ -1.24
TPM1-229ENST00000561242 IQCJQ1A5X6 159 aa7.33□□□□□ -1.24
TPM1-229ENST00000561242 NIT1Q86X76 327 aa7.33□□□□□ -1.24
TPM1-229ENST00000561242 UBE2WQ96B02 151 aa7.33□□□□□ -1.24
TPM1-229ENST00000561242 GNB1LQ9BYB4 327 aa7.33□□□□□ -1.24
TPM1-229ENST00000561242 KLK12Q9UKR0 248 aa7.33□□□□□ -1.24
TPM1-229ENST00000561242 TRAPPC1Q9Y5R8 145 aa7.33□□□□□ -1.24
TPM1-229ENST00000561242 IGKV2D-24A0A075B6R9 120 aa7.32□□□□□ -1.24
TPM1-229ENST00000561242 A0A1B0GXF2 115 aa7.32□□□□□ -1.24
TPM1-229ENST00000561242 PRSS29PA6NIE9 313 aa7.32□□□□□ -1.24
TPM1-229ENST00000561242 LAGE3Q14657 143 aa7.32□□□□□ -1.24
TPM1-229ENST00000561242 OR5A1Q8NGJ0 315 aa7.32□□□□□ -1.24
TPM1-229ENST00000561242 RNF185Q96GF1 192 aa7.32□□□□□ -1.24
TPM1-229ENST00000561242 TMEM70Q9BUB7 260 aa7.32□□□□□ -1.24
TPM1-229ENST00000561242 C1orf43Q9BWL3 253 aa7.32□□□□□ -1.24
TPM1-229ENST00000561242 IBA57-AS1B1ANH7 110 aa7.31□□□□□ -1.24
TPM1-229ENST00000561242 LINC00694P0DN24 101 aa7.31□□□□□ -1.24
TPM1-229ENST00000561242 ATRAIDQ6UW56 229 aa7.31□□□□□ -1.24
TPM1-229ENST00000561242 DEFB104AQ8WTQ1 72 aa7.31□□□□□ -1.24
TPM1-229ENST00000561242 NXT2Q9NPJ8 142 aaKnown RBP7.31□□□□□ -1.24
TPM1-229ENST00000561242 Q9UF83 564 aa7.31□□□□□ -1.24
TPM1-229ENST00000561242 STAB2Q8WWQ8 2551 aa7.3□□□□□ -1.24
TPM1-229ENST00000561242 IGKV3OR2-268A0A0C4DH90 116 aa7.3□□□□□ -1.24
TPM1-229ENST00000561242 TRBV27A0A0K0K1C4 114 aa7.3□□□□□ -1.24
TPM1-229ENST00000561242 ZNF25P17030 456 aaPredicted RBP7.3□□□□□ -1.24
TPM1-229ENST00000561242 RAB5BP61020 215 aa7.3□□□□□ -1.24
TPM1-229ENST00000561242 ORMDL2Q53FV1 153 aa7.3□□□□□ -1.24
TPM1-229ENST00000561242 FA2HQ7L5A8 372 aa7.3□□□□□ -1.24
TPM1-229ENST00000561242 MRPL18Q9H0U6 180 aaKnown RBP7.3□□□□□ -1.24
TPM1-229ENST00000561242 HUWE1Q7Z6Z7 4374 aaKnown RBP7.3□□□□□ -1.24
TPM1-229ENST00000561242 DNAH9Q9NYC9 4486 aa7.3□□□□□ -1.24
TPM1-229ENST00000561242 TENM3Q9P273 2699 aa7.29□□□□□ -1.24
TPM1-229ENST00000561242 TRBV24-1A0A075B6N3 115 aa7.29□□□□□ -1.24
TPM1-229ENST00000561242 RBX1P62877 108 aa7.29□□□□□ -1.24
TPM1-229ENST00000561242 SS18Q15532 418 aa7.29□□□□□ -1.24
TPM1-229ENST00000561242 MIAQ16674 131 aa7.29□□□□□ -1.24
TPM1-229ENST00000561242 Q6ZN92 141 aa7.29□□□□□ -1.24
TPM1-229ENST00000561242 Q6ZR54 194 aa7.29□□□□□ -1.24
TPM1-229ENST00000561242 SMIM2Q9BVW6 85 aa7.29□□□□□ -1.24
TPM1-229ENST00000561242 MUC4Q99102 2169 aa7.29□□□□□ -1.24
TPM1-229ENST00000561242 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.28□□□□□ -1.24
TPM1-229ENST00000561242 TRAV8-4A0A0B4J246 113 aa7.28□□□□□ -1.24
TPM1-229ENST00000561242 A0A1B0GUV1 79 aa7.28□□□□□ -1.24
TPM1-229ENST00000561242 IGKV2-29A2NJV5 120 aaPredicted RBP7.28□□□□□ -1.24
TPM1-229ENST00000561242 LINC01549A6NIU2 74 aa7.28□□□□□ -1.24
TPM1-229ENST00000561242 K7EMI3 77 aa7.28□□□□□ -1.24
TPM1-229ENST00000561242 FGF6P10767 208 aa7.28□□□□□ -1.24
TPM1-229ENST00000561242 IFI27P40305 119 aaPredicted RBP7.28□□□□□ -1.24
TPM1-229ENST00000561242 RPS10P46783 165 aaKnown RBP7.28□□□□□ -1.24
TPM1-229ENST00000561242 POLR2KP53803 58 aaKnown RBP7.28□□□□□ -1.24
TPM1-229ENST00000561242 RPL32P62910 135 aaKnown RBP7.28□□□□□ -1.24
TPM1-229ENST00000561242 KIAA1644Q3SXP7 199 aa7.28□□□□□ -1.24
TPM1-229ENST00000561242 C14orf177Q52M58 125 aa7.28□□□□□ -1.24
TPM1-229ENST00000561242 PAPPA-AS1Q5QFB9 102 aa7.28□□□□□ -1.24
TPM1-229ENST00000561242 LINC00269Q8N2A0 174 aa7.28□□□□□ -1.24
TPM1-229ENST00000561242 COL7A1Q02388 2944 aa7.27□□□□□ -1.25
TPM1-229ENST00000561242 TGIF2-C20orf24A0A0A6YYL0 155 aa7.27□□□□□ -1.25
TPM1-229ENST00000561242 NPYP01303 97 aa7.27□□□□□ -1.25
TPM1-229ENST00000561242 REG3AQ06141 175 aa7.27□□□□□ -1.25
TPM1-229ENST00000561242 MPV17L2Q567V2 206 aa7.27□□□□□ -1.25
TPM1-229ENST00000561242 CFAP161Q6P656 301 aa7.27□□□□□ -1.25
TPM1-229ENST00000561242 NTM-AS1Q6ZSK4 140 aa7.27□□□□□ -1.25
TPM1-229ENST00000561242 NRACQ8N912 160 aa7.27□□□□□ -1.25
TPM1-229ENST00000561242 NACAE9PAV3 2078 aa7.26□□□□□ -1.25
TPM1-229ENST00000561242 S100A1P23297 94 aa7.26□□□□□ -1.25
TPM1-229ENST00000561242 Q8N8P6 123 aa7.26□□□□□ -1.25
TPM1-229ENST00000561242 Q8N976 141 aa7.26□□□□□ -1.25
TPM1-229ENST00000561242 CYSLTR1Q9Y271 337 aa7.26□□□□□ -1.25
TPM1-229ENST00000561242 TSHBP01222 138 aa7.25□□□□□ -1.25
TPM1-229ENST00000561242 CLPSL2Q6UWE3 100 aa7.25□□□□□ -1.25
TPM1-229ENST00000561242 C2orf88Q9BSF0 95 aa7.25□□□□□ -1.25
TPM1-229ENST00000561242 CCL25O15444 150 aa7.24□□□□□ -1.25
TPM1-229ENST00000561242 MALP21145 153 aa7.24□□□□□ -1.25
TPM1-229ENST00000561242 ZNF664Q8N3J9 261 aa7.24□□□□□ -1.25
TPM1-229ENST00000561242 SPANXA1Q9NS26 97 aa7.24□□□□□ -1.25
TPM1-229ENST00000561242 AP5S1Q9NUS5 200 aa7.24□□□□□ -1.25
TPM1-229ENST00000561242 GAS8-AS1O95177 125 aa7.23□□□□□ -1.25
TPM1-229ENST00000561242 BAGE3Q86Y29 109 aa7.23□□□□□ -1.25
TPM1-229ENST00000561242 VCX2Q9H322 139 aa7.23□□□□□ -1.25
TPM1-229ENST00000561242 PGPEP1Q9NXJ5 209 aa7.23□□□□□ -1.25
TPM1-229ENST00000561242 IGLV10-54A0A075B6I4 117 aa7.22□□□□□ -1.25
TPM1-229ENST00000561242 PRSS47A8MTI9 375 aa7.22□□□□□ -1.25
TPM1-229ENST00000561242 C1orf196B1AJZ1 125 aa7.22□□□□□ -1.25
TPM1-229ENST00000561242 ESDP10768 282 aa7.22□□□□□ -1.25
TPM1-229ENST00000561242 TEX43Q6ZNM6 134 aa7.22□□□□□ -1.25
TPM1-229ENST00000561242 CBLN2Q8IUK8 224 aa7.22□□□□□ -1.25
TPM1-229ENST00000561242 C20orf203Q8NBC4 194 aa7.22□□□□□ -1.25
TPM1-229ENST00000561242 ALKBH7Q9BT30 221 aaPredicted RBP7.22□□□□□ -1.25
TPM1-229ENST00000561242 IGLV4-60A0A075B6I1 120 aa7.21□□□□□ -1.26
TPM1-229ENST00000561242 RTL8CO15255 209 aa7.21□□□□□ -1.26
TPM1-229ENST00000561242 APOMO95445 188 aa7.21□□□□□ -1.26
TPM1-229ENST00000561242 MRPL52Q86TS9 123 aaKnown RBP7.21□□□□□ -1.26
TPM1-229ENST00000561242 SCGB3A1Q96QR1 104 aa7.21□□□□□ -1.26
TPM1-229ENST00000561242 TIMM21Q9BVV7 248 aa7.21□□□□□ -1.26
TPM1-229ENST00000561242 CSDC2Q9Y534 153 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms