RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 IGHV1-58A0A0C4DH39 117 aa3.62□□□□□ -1.83
CASC4-208ENST00000559151 CST7O76096 145 aa3.62□□□□□ -1.83
CASC4-208ENST00000559151 UBL3O95164 117 aa3.62□□□□□ -1.83
CASC4-208ENST00000559151 SPINK8P0C7L1 97 aa3.62□□□□□ -1.83
CASC4-208ENST00000559151 LYNX1P0DP58 116 aa3.62□□□□□ -1.83
CASC4-208ENST00000559151 RPL22P35268 128 aaKnown RBP3.62□□□□□ -1.83
CASC4-208ENST00000559151 UBA52P62987 128 aaKnown RBP3.62□□□□□ -1.83
CASC4-208ENST00000559151 BTG2P78543 158 aa3.62□□□□□ -1.83
CASC4-208ENST00000559151 CLLU1Q5K131 121 aa3.62□□□□□ -1.83
CASC4-208ENST00000559151 FOXI2Q6ZQN5 318 aa3.62□□□□□ -1.83
CASC4-208ENST00000559151 TTC9CQ8N5M4 171 aa3.62□□□□□ -1.83
CASC4-208ENST00000559151 OR10AC1Q8NH08 325 aa3.62□□□□□ -1.83
CASC4-208ENST00000559151 RPRMQ9NS64 109 aa3.62□□□□□ -1.83
CASC4-208ENST00000559151 COMMD3Q9UBI1 195 aa3.62□□□□□ -1.83
CASC4-208ENST00000559151 RNF11Q9Y3C5 154 aa3.62□□□□□ -1.83
CASC4-208ENST00000559151 MPC1Q9Y5U8 109 aa3.62□□□□□ -1.83
CASC4-208ENST00000559151 PDCD11Q14690 1871 aaKnown RBP3.62□□□□□ -1.83
CASC4-208ENST00000559151 CELSR2Q9HCU4 2923 aa3.61□□□□□ -1.83
CASC4-208ENST00000559151 NBASA2RRP1 2371 aa3.61□□□□□ -1.83
CASC4-208ENST00000559151 MED13Q9UHV7 2174 aa3.61□□□□□ -1.83
CASC4-208ENST00000559151 GOLGA4Q13439 2230 aaKnown RBP3.61□□□□□ -1.83
CASC4-208ENST00000559151 TRAV13-1A0A0B4J241 112 aa3.61□□□□□ -1.83
CASC4-208ENST00000559151 TNFP01375 233 aa3.61□□□□□ -1.83
CASC4-208ENST00000559151 CD2P06729 351 aa3.61□□□□□ -1.83
CASC4-208ENST00000559151 RNASE4P34096 147 aaKnown RBP3.61□□□□□ -1.83
CASC4-208ENST00000559151 SRP14P37108 136 aaKnown RBP3.61□□□□□ -1.83
CASC4-208ENST00000559151 DIAPH2-AS1Q14236 149 aa3.61□□□□□ -1.83
CASC4-208ENST00000559151 SNRNP25Q9BV90 132 aaKnown RBP3.61□□□□□ -1.83
CASC4-208ENST00000559151 ANAPC1Q9H1A4 1944 aa3.61□□□□□ -1.83
CASC4-208ENST00000559151 F8P00451 2351 aa3.61□□□□□ -1.83
CASC4-208ENST00000559151 OTOGQ6ZRI0 2925 aa3.6□□□□□ -1.83
CASC4-208ENST00000559151 A8MWV9 139 aa3.6□□□□□ -1.83
CASC4-208ENST00000559151 TRAPPC2P0DI81 140 aa3.6□□□□□ -1.83
CASC4-208ENST00000559151 TRAPPC2BP0DI82 140 aa3.6□□□□□ -1.83
CASC4-208ENST00000559151 IZUMO2Q6UXV1 221 aa3.6□□□□□ -1.83
CASC4-208ENST00000559151 C10orf105Q8TEF2 133 aa3.6□□□□□ -1.83
CASC4-208ENST00000559151 SPENQ96T58 3664 aaKnown RBP3.59□□□□□ -1.83
CASC4-208ENST00000559151 TACC2O95359 2948 aa3.59□□□□□ -1.83
CASC4-208ENST00000559151 RP1L1Q8IWN7 2480 aaPredicted RBP3.59□□□□□ -1.83
CASC4-208ENST00000559151 IGKV2-40A0A087WW87 121 aaPredicted RBP3.59□□□□□ -1.83
CASC4-208ENST00000559151 OR2T8A6NH00 312 aa3.59□□□□□ -1.83
CASC4-208ENST00000559151 H3BMG7 143 aa3.59□□□□□ -1.83
CASC4-208ENST00000559151 TMEM256-PLSCR3K7ERE1 68 aa3.59□□□□□ -1.83
CASC4-208ENST00000559151 M0R378 163 aa3.59□□□□□ -1.83
CASC4-208ENST00000559151 OR1I1O60431 355 aa3.59□□□□□ -1.83
CASC4-208ENST00000559151 IGKV2D-40P01614 121 aaPredicted RBP3.59□□□□□ -1.83
CASC4-208ENST00000559151 CXCL1P09341 107 aa3.59□□□□□ -1.83
CASC4-208ENST00000559151 CD52P31358 61 aa3.59□□□□□ -1.83
CASC4-208ENST00000559151 QRFPP83859 136 aa3.59□□□□□ -1.83
CASC4-208ENST00000559151 FAM74A1Q5RGS3 127 aa3.59□□□□□ -1.83
CASC4-208ENST00000559151 MRPL54Q6P161 138 aaKnown RBP3.59□□□□□ -1.83
CASC4-208ENST00000559151 C22orf39Q6P5X5 142 aa3.59□□□□□ -1.83
CASC4-208ENST00000559151 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.59□□□□□ -1.83
CASC4-208ENST00000559151 SVBPQ8N300 66 aa3.59□□□□□ -1.83
CASC4-208ENST00000559151 NOP16Q9Y3C1 178 aaKnown RBP3.59□□□□□ -1.83
CASC4-208ENST00000559151 DNHD1Q96M86 4753 aa3.59□□□□□ -1.84
CASC4-208ENST00000559151 PDZD2O15018 2839 aa3.58□□□□□ -1.84
CASC4-208ENST00000559151 MYLKQ15746 1914 aa3.58□□□□□ -1.84
CASC4-208ENST00000559151 CEP192Q8TEP8 1941 aa3.58□□□□□ -1.84
CASC4-208ENST00000559151 ADGRG4Q8IZF6 3080 aa3.58□□□□□ -1.84
CASC4-208ENST00000559151 ZNF727A8MUV8 499 aa3.58□□□□□ -1.84
CASC4-208ENST00000559151 M0R129 80 aa3.58□□□□□ -1.84
CASC4-208ENST00000559151 NDUFB3O43676 98 aa3.58□□□□□ -1.84
CASC4-208ENST00000559151 KLF7O75840 302 aaPredicted RBP3.58□□□□□ -1.84
CASC4-208ENST00000559151 TCRAP04437 139 aa3.58□□□□□ -1.84
CASC4-208ENST00000559151 IFITM1P13164 125 aa3.58□□□□□ -1.84
CASC4-208ENST00000559151 ETV6P41212 452 aa3.58□□□□□ -1.84
CASC4-208ENST00000559151 DPH3Q96FX2 82 aa3.58□□□□□ -1.84
CASC4-208ENST00000559151 TNRC6BQ9UPQ9 1833 aaKnown RBP3.58□□□□□ -1.84
CASC4-208ENST00000559151 HELZP42694 1942 aaKnown RBP3.58□□□□□ -1.84
CASC4-208ENST00000559151 MTORP42345 2549 aa3.58□□□□□ -1.84
CASC4-208ENST00000559151 HIVEP1P15822 2718 aa3.57□□□□□ -1.84
CASC4-208ENST00000559151 IGKV3-7A0A075B6H7 116 aa3.57□□□□□ -1.84
CASC4-208ENST00000559151 A0A1W2PRS3 328 aa3.57□□□□□ -1.84
CASC4-208ENST00000559151 MT-ND6P03923 174 aa3.57□□□□□ -1.84
CASC4-208ENST00000559151 PYYP10082 97 aa3.57□□□□□ -1.84
CASC4-208ENST00000559151 IL7P13232 177 aa3.57□□□□□ -1.84
CASC4-208ENST00000559151 UBE2BP63146 152 aa3.57□□□□□ -1.84
CASC4-208ENST00000559151 HBBP68871 147 aa3.57□□□□□ -1.84
CASC4-208ENST00000559151 PDE6HQ13956 83 aa3.57□□□□□ -1.84
CASC4-208ENST00000559151 MED12LQ86YW9 2145 aa3.57□□□□□ -1.84
CASC4-208ENST00000559151 OR5D16Q8NGK9 328 aa3.57□□□□□ -1.84
CASC4-208ENST00000559151 LINC00052Q96N35 136 aa3.57□□□□□ -1.84
CASC4-208ENST00000559151 VAMP8Q9BV40 100 aa3.57□□□□□ -1.84
CASC4-208ENST00000559151 ABCA2Q9BZC7 2435 aa3.57□□□□□ -1.84
CASC4-208ENST00000559151 DPY30Q9C005 99 aa3.57□□□□□ -1.84
CASC4-208ENST00000559151 FKBP11Q9NYL4 201 aa3.57□□□□□ -1.84
CASC4-208ENST00000559151 CSMD1Q96PZ7 3565 aa3.56□□□□□ -1.84
CASC4-208ENST00000559151 HCRTO43612 131 aa3.56□□□□□ -1.84
CASC4-208ENST00000559151 ARPP19P56211 112 aa3.56□□□□□ -1.84
CASC4-208ENST00000559151 ESRGQ1W209 222 aa3.56□□□□□ -1.84
CASC4-208ENST00000559151 C9orf153Q5TBE3 101 aa3.56□□□□□ -1.84
CASC4-208ENST00000559151 KCNRGQ8N5I3 272 aa3.56□□□□□ -1.84
CASC4-208ENST00000559151 OR4B1Q8NGF8 309 aa3.56□□□□□ -1.84
CASC4-208ENST00000559151 RETNLBQ9BQ08 111 aa3.56□□□□□ -1.84
CASC4-208ENST00000559151 NAA60Q9H7X0 242 aa3.56□□□□□ -1.84
CASC4-208ENST00000559151 BCL2L10Q9HD36 194 aa3.56□□□□□ -1.84
CASC4-208ENST00000559151 NIPBLQ6KC79 2804 aaeCLIP3.55□□□□□ -1.84
CASC4-208ENST00000559151 PTPRDP23468 1912 aa3.55□□□□□ -1.84
CASC4-208ENST00000559151 TRGV10A0A0A0MS01 117 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms