RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 COTL1Q14019 142 aa9.18□□□□□ -0.94
TSPAN3-205ENST00000558745 MRPL51Q4U2R6 128 aaKnown RBP9.18□□□□□ -0.94
TSPAN3-205ENST00000558745 COMMD7Q86VX2 200 aa9.18□□□□□ -0.94
TSPAN3-205ENST00000558745 BAALCQ8WXS3 180 aa9.18□□□□□ -0.94
TSPAN3-205ENST00000558745 FRZBQ92765 325 aa9.18□□□□□ -0.94
TSPAN3-205ENST00000558745 TMEM243Q9BU79 118 aa9.18□□□□□ -0.94
TSPAN3-205ENST00000558745 CHCHD7Q9BUK0 85 aa9.18□□□□□ -0.94
TSPAN3-205ENST00000558745 IGLV4-60A0A075B6I1 120 aa9.17□□□□□ -0.94
TSPAN3-205ENST00000558745 F8W036 122 aa9.17□□□□□ -0.94
TSPAN3-205ENST00000558745 EREGO14944 169 aa9.17□□□□□ -0.94
TSPAN3-205ENST00000558745 AMTP48728 403 aa9.17□□□□□ -0.94
TSPAN3-205ENST00000558745 ELOBQ15370 118 aa9.17□□□□□ -0.94
TSPAN3-205ENST00000558745 FAM104BQ5XKR9 115 aa9.17□□□□□ -0.94
TSPAN3-205ENST00000558745 UQCC3Q6UW78 93 aa9.17□□□□□ -0.94
TSPAN3-205ENST00000558745 TM2D2Q9BX73 214 aa9.17□□□□□ -0.94
TSPAN3-205ENST00000558745 ST20Q9HBF5 79 aa9.17□□□□□ -0.94
TSPAN3-205ENST00000558745 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.16□□□□□ -0.94
TSPAN3-205ENST00000558745 TRBV6-5A0A0K0K1A5 114 aa9.16□□□□□ -0.94
TSPAN3-205ENST00000558745 A0A1B0GXF2 115 aa9.16□□□□□ -0.94
TSPAN3-205ENST00000558745 IGKV2-29A2NJV5 120 aaPredicted RBP9.16□□□□□ -0.94
TSPAN3-205ENST00000558745 PPP1R2P9O14990 202 aa9.16□□□□□ -0.94
TSPAN3-205ENST00000558745 MT-ND4LP03901 98 aa9.16□□□□□ -0.94
TSPAN3-205ENST00000558745 PMCHP20382 165 aa9.16□□□□□ -0.94
TSPAN3-205ENST00000558745 PNRC1Q12796 327 aaPredicted RBP9.16□□□□□ -0.94
TSPAN3-205ENST00000558745 LINC00269Q8N2A0 174 aa9.16□□□□□ -0.94
TSPAN3-205ENST00000558745 NRACQ8N912 160 aa9.16□□□□□ -0.94
TSPAN3-205ENST00000558745 C20orf203Q8NBC4 194 aa9.16□□□□□ -0.94
TSPAN3-205ENST00000558745 MRAP2Q96G30 205 aa9.16□□□□□ -0.94
TSPAN3-205ENST00000558745 TMEM70Q9BUB7 260 aa9.16□□□□□ -0.94
TSPAN3-205ENST00000558745 I3L3M4 83 aa9.15□□□□□ -0.94
TSPAN3-205ENST00000558745 POLR2KP53803 58 aaKnown RBP9.15□□□□□ -0.94
TSPAN3-205ENST00000558745 ANAPC16Q96DE5 110 aa9.15□□□□□ -0.94
TSPAN3-205ENST00000558745 TMEM242Q9NWH2 141 aa9.15□□□□□ -0.94
TSPAN3-205ENST00000558745 APOBP04114 4563 aaKnown RBP9.15□□□□□ -0.94
TSPAN3-205ENST00000558745 UBE2L6O14933 153 aa9.14□□□□□ -0.95
TSPAN3-205ENST00000558745 TSHBP01222 138 aa9.14□□□□□ -0.95
TSPAN3-205ENST00000558745 CRPP02741 224 aa9.14□□□□□ -0.95
TSPAN3-205ENST00000558745 HBBP68871 147 aa9.14□□□□□ -0.95
TSPAN3-205ENST00000558745 KRTAP4-5Q9BYR2 181 aa9.14□□□□□ -0.95
TSPAN3-205ENST00000558745 KRTAP3-3Q9BYR6 98 aa9.14□□□□□ -0.95
TSPAN3-205ENST00000558745 KRTAP3-2Q9BYR7 98 aa9.14□□□□□ -0.95
TSPAN3-205ENST00000558745 PGPEP1Q9NXJ5 209 aa9.14□□□□□ -0.95
TSPAN3-205ENST00000558745 LINC00862A6NCI5 91 aa9.13□□□□□ -0.95
TSPAN3-205ENST00000558745 APCSP02743 223 aa9.13□□□□□ -0.95
TSPAN3-205ENST00000558745 PKIAP61925 76 aa9.13□□□□□ -0.95
TSPAN3-205ENST00000558745 Q8N814 137 aa9.13□□□□□ -0.95
TSPAN3-205ENST00000558745 IGLV10-54A0A075B6I4 117 aa9.12□□□□□ -0.95
TSPAN3-205ENST00000558745 A0A1B0GW15 77 aa9.12□□□□□ -0.95
TSPAN3-205ENST00000558745 CKS2P33552 79 aa9.12□□□□□ -0.95
TSPAN3-205ENST00000558745 KRTAP10-1P60331 282 aa9.12□□□□□ -0.95
TSPAN3-205ENST00000558745 REG3AQ06141 175 aa9.12□□□□□ -0.95
TSPAN3-205ENST00000558745 Q0VG73 95 aa9.12□□□□□ -0.95
TSPAN3-205ENST00000558745 RMI2Q96E14 147 aa9.12□□□□□ -0.95
TSPAN3-205ENST00000558745 PRR34Q9NV39 138 aa9.12□□□□□ -0.95
TSPAN3-205ENST00000558745 HSPG2P98160 4391 aa9.11□□□□□ -0.95
TSPAN3-205ENST00000558745 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.11□□□□□ -0.95
TSPAN3-205ENST00000558745 A0A1B0GUV1 79 aa9.11□□□□□ -0.95
TSPAN3-205ENST00000558745 D6R8Y8 96 aa9.11□□□□□ -0.95
TSPAN3-205ENST00000558745 RNASEKQ6P5S7 137 aaKnown RBP9.11□□□□□ -0.95
TSPAN3-205ENST00000558745 C1orf43Q9BWL3 253 aa9.11□□□□□ -0.95
TSPAN3-205ENST00000558745 SEC11CQ9BY50 192 aa9.11□□□□□ -0.95
TSPAN3-205ENST00000558745 DNAH8Q96JB1 4490 aa9.11□□□□□ -0.95
TSPAN3-205ENST00000558745 IGKV3OR2-268A0A0C4DH90 116 aa9.1□□□□□ -0.95
TSPAN3-205ENST00000558745 TRBV27A0A0K0K1C4 114 aa9.1□□□□□ -0.95
TSPAN3-205ENST00000558745 VCYO14598 125 aa9.1□□□□□ -0.95
TSPAN3-205ENST00000558745 S100A8P05109 93 aa9.1□□□□□ -0.95
TSPAN3-205ENST00000558745 FGF6P10767 208 aa9.1□□□□□ -0.95
TSPAN3-205ENST00000558745 ESDP10768 282 aa9.1□□□□□ -0.95
TSPAN3-205ENST00000558745 SUMO2P61956 95 aaKnown RBP9.1□□□□□ -0.95
TSPAN3-205ENST00000558745 KRTAP26-1Q6PEX3 210 aa9.1□□□□□ -0.95
TSPAN3-205ENST00000558745 COX11Q9Y6N1 276 aa9.1□□□□□ -0.95
TSPAN3-205ENST00000558745 IGLV5-52A0A0A0MRZ9 124 aa9.09□□□□□ -0.95
TSPAN3-205ENST00000558745 TNFRSF6BO95407 300 aa9.09□□□□□ -0.95
TSPAN3-205ENST00000558745 NPYP01303 97 aa9.09□□□□□ -0.95
TSPAN3-205ENST00000558745 MIAQ16674 131 aa9.09□□□□□ -0.95
TSPAN3-205ENST00000558745 AMMECR1LQ6DCA0 310 aa9.09□□□□□ -0.95
TSPAN3-205ENST00000558745 ATP5L2Q7Z4Y8 100 aa9.09□□□□□ -0.95
TSPAN3-205ENST00000558745 HLA-DQA1P01909 254 aa9.08□□□□□ -0.96
TSPAN3-205ENST00000558745 GCSHP23434 173 aa9.08□□□□□ -0.96
TSPAN3-205ENST00000558745 C10orf91Q5T1B1 145 aa9.08□□□□□ -0.96
TSPAN3-205ENST00000558745 TMEM136Q6ZRR5 245 aa9.08□□□□□ -0.96
TSPAN3-205ENST00000558745 TRBV24-1A0A075B6N3 115 aa9.07□□□□□ -0.96
TSPAN3-205ENST00000558745 PPP1R17O96001 155 aa9.07□□□□□ -0.96
TSPAN3-205ENST00000558745 FCER1GP30273 86 aa9.07□□□□□ -0.96
TSPAN3-205ENST00000558745 LINC01620Q4KN68 170 aa9.07□□□□□ -0.96
TSPAN3-205ENST00000558745 CDPF1Q6NVV7 123 aa9.07□□□□□ -0.96
TSPAN3-205ENST00000558745 BTF3L4Q96K17 158 aa9.07□□□□□ -0.96
TSPAN3-205ENST00000558745 C7orf77A4D0Y5 90 aa9.06□□□□□ -0.96
TSPAN3-205ENST00000558745 C20orf78Q9BR46 151 aa9.06□□□□□ -0.96
TSPAN3-205ENST00000558745 USP17L23D6RBM5 183 aa9.05□□□□□ -0.96
TSPAN3-205ENST00000558745 H7C423 109 aa9.05□□□□□ -0.96
TSPAN3-205ENST00000558745 TCAPO15273 167 aa9.05□□□□□ -0.96
TSPAN3-205ENST00000558745 HAMPP81172 84 aa9.05□□□□□ -0.96
TSPAN3-205ENST00000558745 CLRN3Q8NCR9 226 aa9.05□□□□□ -0.96
TSPAN3-205ENST00000558745 NTN5Q8WTR8 489 aaPredicted RBP9.05□□□□□ -0.96
TSPAN3-205ENST00000558745 PRELID3AQ96N28 172 aa9.05□□□□□ -0.96
TSPAN3-205ENST00000558745 CTDSP1Q9GZU7 261 aa9.05□□□□□ -0.96
TSPAN3-205ENST00000558745 LOC389332A0A1B0GUA5 103 aa9.05□□□□□ -0.96
TSPAN3-205ENST00000558745 CDK2AP2O75956 126 aa9.05□□□□□ -0.96
TSPAN3-205ENST00000558745 ORMDL3Q8N138 153 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms