RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 VPS13BQ7Z7G8 4022 aa5.28□□□□□ -1.56
TRAF3-205ENST00000558700 FAT1Q14517 4588 aa5.28□□□□□ -1.56
TRAF3-205ENST00000558700 TRBV25-1A0A075B6N4 114 aa5.27□□□□□ -1.57
TRAF3-205ENST00000558700 MGPP08493 103 aa5.27□□□□□ -1.57
TRAF3-205ENST00000558700 GNG4P50150 75 aa5.27□□□□□ -1.57
TRAF3-205ENST00000558700 CACNG7P62955 275 aa5.27□□□□□ -1.57
TRAF3-205ENST00000558700 LINC01620Q4KN68 170 aa5.27□□□□□ -1.57
TRAF3-205ENST00000558700 PRSS3P2Q8NHM4 247 aa5.27□□□□□ -1.57
TRAF3-205ENST00000558700 BIN3Q9NQY0 253 aa5.27□□□□□ -1.57
TRAF3-205ENST00000558700 IGHV1-24A0A0C4DH33 117 aa5.26□□□□□ -1.57
TRAF3-205ENST00000558700 PDE6DO43924 150 aa5.26□□□□□ -1.57
TRAF3-205ENST00000558700 P01737 135 aa5.26□□□□□ -1.57
TRAF3-205ENST00000558700 TRGC1P0CF51 173 aa5.26□□□□□ -1.57
TRAF3-205ENST00000558700 IGLC6P0CF74 106 aa5.26□□□□□ -1.57
TRAF3-205ENST00000558700 SEC61BP60468 96 aaKnown RBP5.26□□□□□ -1.57
TRAF3-205ENST00000558700 SSTP61278 116 aa5.26□□□□□ -1.57
TRAF3-205ENST00000558700 CCL20P78556 96 aa5.26□□□□□ -1.57
TRAF3-205ENST00000558700 MEF2BQ02080 365 aaPredicted RBP5.26□□□□□ -1.57
TRAF3-205ENST00000558700 IQCJQ1A5X6 159 aa5.26□□□□□ -1.57
TRAF3-205ENST00000558700 ENHOQ6UWT2 76 aa5.26□□□□□ -1.57
TRAF3-205ENST00000558700 OR2D3Q8NGH3 330 aa5.26□□□□□ -1.57
TRAF3-205ENST00000558700 OCC1Q8TAD7 63 aa5.26□□□□□ -1.57
TRAF3-205ENST00000558700 MPLKIPQ8TAP9 179 aa5.26□□□□□ -1.57
TRAF3-205ENST00000558700 CHAC1Q9BUX1 264 aa5.26□□□□□ -1.57
TRAF3-205ENST00000558700 KIF25-AS1Q9Y6Z4 181 aa5.26□□□□□ -1.57
TRAF3-205ENST00000558700 MYCBP2O75592 4640 aa5.25□□□□□ -1.57
TRAF3-205ENST00000558700 HERC1Q15751 4861 aa5.25□□□□□ -1.57
TRAF3-205ENST00000558700 C19orf71A6NCJ1 209 aa5.25□□□□□ -1.57
TRAF3-205ENST00000558700 C5orf52A6NGY3 159 aa5.25□□□□□ -1.57
TRAF3-205ENST00000558700 F2Z2F3 143 aa5.25□□□□□ -1.57
TRAF3-205ENST00000558700 GZMBP10144 247 aa5.25□□□□□ -1.57
TRAF3-205ENST00000558700 BCL2P10415 239 aa5.25□□□□□ -1.57
TRAF3-205ENST00000558700 TAGLN2P37802 199 aaKnown RBP5.25□□□□□ -1.57
TRAF3-205ENST00000558700 SULT1A2P50226 295 aa5.25□□□□□ -1.57
TRAF3-205ENST00000558700 RBX1P62877 108 aa5.25□□□□□ -1.57
TRAF3-205ENST00000558700 GAGE6Q13070 117 aa5.25□□□□□ -1.57
TRAF3-205ENST00000558700 CLPSL2Q6UWE3 100 aa5.25□□□□□ -1.57
TRAF3-205ENST00000558700 NTM-AS1Q6ZSK4 140 aa5.25□□□□□ -1.57
TRAF3-205ENST00000558700 DEFB104AQ8WTQ1 72 aa5.25□□□□□ -1.57
TRAF3-205ENST00000558700 PRR34Q9NV39 138 aa5.25□□□□□ -1.57
TRAF3-205ENST00000558700 hDV102S1A0JD36 115 aa5.24□□□□□ -1.57
TRAF3-205ENST00000558700 M0QY20 66 aa5.24□□□□□ -1.57
TRAF3-205ENST00000558700 IGLV2-8P01709 118 aa5.24□□□□□ -1.57
TRAF3-205ENST00000558700 CTRLP40313 264 aa5.24□□□□□ -1.57
TRAF3-205ENST00000558700 WDR73Q6P4I2 378 aa5.24□□□□□ -1.57
TRAF3-205ENST00000558700 RASL11AQ6T310 242 aa5.24□□□□□ -1.57
TRAF3-205ENST00000558700 LINC00269Q8N2A0 174 aa5.24□□□□□ -1.57
TRAF3-205ENST00000558700 CIRBP-AS1Q8TBR5 109 aa5.24□□□□□ -1.57
TRAF3-205ENST00000558700 TMEM243Q9BU79 118 aa5.24□□□□□ -1.57
TRAF3-205ENST00000558700 DPH3P1Q9H4G8 78 aa5.24□□□□□ -1.57
TRAF3-205ENST00000558700 MED9Q9NWA0 146 aa5.24□□□□□ -1.57
TRAF3-205ENST00000558700 TRBV20OR9-2A0A075B6H5 130 aa5.23□□□□□ -1.57
TRAF3-205ENST00000558700 RAB19A4D1S5 217 aa5.23□□□□□ -1.57
TRAF3-205ENST00000558700 KRTAP29-1A8MX34 341 aaPredicted RBP5.23□□□□□ -1.57
TRAF3-205ENST00000558700 NKX2-5P52952 324 aaPredicted RBP5.23□□□□□ -1.57
TRAF3-205ENST00000558700 REG3AQ06141 175 aa5.23□□□□□ -1.57
TRAF3-205ENST00000558700 TCTE3Q8IZS6 198 aa5.23□□□□□ -1.57
TRAF3-205ENST00000558700 PGLYRP4Q96LB8 373 aa5.23□□□□□ -1.57
TRAF3-205ENST00000558700 TRAV8-4A0A0B4J246 113 aa5.22□□□□□ -1.57
TRAF3-205ENST00000558700 UBE2L6O14933 153 aa5.22□□□□□ -1.57
TRAF3-205ENST00000558700 PRSS1P07477 247 aa5.22□□□□□ -1.57
TRAF3-205ENST00000558700 LYZL1Q6UWQ5 148 aa5.22□□□□□ -1.57
TRAF3-205ENST00000558700 SLC51BQ86UW2 128 aa5.22□□□□□ -1.57
TRAF3-205ENST00000558700 CNFNQ9BYD5 112 aa5.22□□□□□ -1.57
TRAF3-205ENST00000558700 NIT2Q9NQR4 276 aa5.22□□□□□ -1.57
TRAF3-205ENST00000558700 IGLV10-54A0A075B6I4 117 aa5.21□□□□□ -1.58
TRAF3-205ENST00000558700 LOC100996750A0A140TA64 210 aa5.21□□□□□ -1.58
TRAF3-205ENST00000558700 A0A1B0GUV1 79 aa5.21□□□□□ -1.58
TRAF3-205ENST00000558700 NTF3P20783 257 aa5.21□□□□□ -1.58
TRAF3-205ENST00000558700 AMTP48728 403 aa5.21□□□□□ -1.58
TRAF3-205ENST00000558700 COTL1Q14019 142 aa5.21□□□□□ -1.58
TRAF3-205ENST00000558700 C10orf25Q5T742 122 aa5.21□□□□□ -1.58
TRAF3-205ENST00000558700 C9orf163Q8N9P6 203 aa5.21□□□□□ -1.58
TRAF3-205ENST00000558700 KRTAP4-6Q9BYQ5 205 aa5.21□□□□□ -1.58
TRAF3-205ENST00000558700 RPP21Q9H633 154 aaKnown RBP5.21□□□□□ -1.58
TRAF3-205ENST00000558700 DNAH8Q96JB1 4490 aa5.2□□□□□ -1.58
TRAF3-205ENST00000558700 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.2□□□□□ -1.58
TRAF3-205ENST00000558700 KRTAP10-4P60372 401 aaPredicted RBP5.2□□□□□ -1.58
TRAF3-205ENST00000558700 RPL37AP61513 92 aaKnown RBP5.2□□□□□ -1.58
TRAF3-205ENST00000558700 CNBPP62633 177 aaKnown RBP5.2□□□□□ -1.58
TRAF3-205ENST00000558700 TWIST1Q15672 202 aa5.2□□□□□ -1.58
TRAF3-205ENST00000558700 KRTAP26-1Q6PEX3 210 aa5.2□□□□□ -1.58
TRAF3-205ENST00000558700 SMIM15Q7Z3B0 74 aa5.2□□□□□ -1.58
TRAF3-205ENST00000558700 C9orf62Q8N4C0 152 aa5.2□□□□□ -1.58
TRAF3-205ENST00000558700 C20orf203Q8NBC4 194 aa5.2□□□□□ -1.58
TRAF3-205ENST00000558700 IGLV4-60A0A075B6I1 120 aa5.19□□□□□ -1.58
TRAF3-205ENST00000558700 IGLV5-39A0A0G2JS06 123 aa5.19□□□□□ -1.58
TRAF3-205ENST00000558700 TMEM250H0YL14 139 aa5.19□□□□□ -1.58
TRAF3-205ENST00000558700 PAPPA-AS1Q5QFB9 102 aa5.19□□□□□ -1.58
TRAF3-205ENST00000558700 RNASE7Q9H1E1 156 aaKnown RBP5.19□□□□□ -1.58
TRAF3-205ENST00000558700 IGHV3-64A0A075B6Q5 118 aa5.18□□□□□ -1.58
TRAF3-205ENST00000558700 K7EN84 100 aa5.18□□□□□ -1.58
TRAF3-205ENST00000558700 NCR2O95944 276 aa5.18□□□□□ -1.58
TRAF3-205ENST00000558700 OXTP01178 125 aa5.18□□□□□ -1.58
TRAF3-205ENST00000558700 APCSP02743 223 aa5.18□□□□□ -1.58
TRAF3-205ENST00000558700 TEX261Q6UWH6 196 aa5.18□□□□□ -1.58
TRAF3-205ENST00000558700 AKAP14Q86UN6 197 aa5.18□□□□□ -1.58
TRAF3-205ENST00000558700 GFRA4Q9GZZ7 299 aa5.18□□□□□ -1.58
TRAF3-205ENST00000558700 TRAV26-2A0A0B4J265 109 aa5.17□□□□□ -1.58
TRAF3-205ENST00000558700 GATCO43716 136 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms