RNA–Protein interactions for RNA: ENST00000558445.5

TRPM1-207, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-207ENST00000558445 CFHR3Q02985 330 aa7.5□□□□□ -1.21
TRPM1-207ENST00000558445 C9orf47Q6ZRZ4 202 aa7.5□□□□□ -1.21
TRPM1-207ENST00000558445 APC2O95996 2303 aa7.5□□□□□ -1.21
TRPM1-207ENST00000558445 KLKP1Q107X0 134 aa7.5□□□□□ -1.21
TRPM1-207ENST00000558445 PRR15Q8IV56 129 aa7.5□□□□□ -1.21
TRPM1-207ENST00000558445 LINC00574Q9H8X3 128 aa7.5□□□□□ -1.21
TRPM1-207ENST00000558445 IGHV1-18A0A0C4DH31 117 aa7.49□□□□□ -1.21
TRPM1-207ENST00000558445 NDUFA1O15239 70 aa7.49□□□□□ -1.21
TRPM1-207ENST00000558445 C15orf32Q32M92 178 aa7.49□□□□□ -1.21
TRPM1-207ENST00000558445 FP248Q71RG6 208 aaPredicted RBP7.49□□□□□ -1.21
TRPM1-207ENST00000558445 A6NED7 52 aa7.49□□□□□ -1.21
TRPM1-207ENST00000558445 FAM110DQ8TAY7 271 aaPredicted RBP7.49□□□□□ -1.21
TRPM1-207ENST00000558445 SAP25Q8TEE9 199 aa7.49□□□□□ -1.21
TRPM1-207ENST00000558445 NOTCH3Q9UM47 2321 aa7.49□□□□□ -1.21
TRPM1-207ENST00000558445 CDK2AP2O75956 126 aa7.49□□□□□ -1.21
TRPM1-207ENST00000558445 IGHV1-8P0DP01 117 aa7.49□□□□□ -1.21
TRPM1-207ENST00000558445 PRB3Q04118 309 aaPredicted RBP7.49□□□□□ -1.21
TRPM1-207ENST00000558445 RNASE13Q5GAN3 156 aaKnown RBP7.49□□□□□ -1.21
TRPM1-207ENST00000558445 GNRH2O43555 120 aa7.49□□□□□ -1.21
TRPM1-207ENST00000558445 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.49□□□□□ -1.21
TRPM1-207ENST00000558445 MUC22E2RYF6 1773 aaPredicted RBP7.48□□□□□ -1.21
TRPM1-207ENST00000558445 GVINP1Q7Z2Y8 2422 aa7.48□□□□□ -1.21
TRPM1-207ENST00000558445 H3BQ85 93 aa7.47□□□□□ -1.21
TRPM1-207ENST00000558445 UBE2AP49459 152 aa7.47□□□□□ -1.21
TRPM1-207ENST00000558445 SERTAD4-AS1Q5TG53 156 aa7.47□□□□□ -1.21
TRPM1-207ENST00000558445 SND1-IT1Q9HBX3 110 aa7.47□□□□□ -1.21
TRPM1-207ENST00000558445 ARHGAP32A7KAX9 2087 aa7.47□□□□□ -1.21
TRPM1-207ENST00000558445 PRB2P02812 416 aaPredicted RBP7.47□□□□□ -1.21
TRPM1-207ENST00000558445 CLEC19AQ6UXS0 136 aa7.47□□□□□ -1.21
TRPM1-207ENST00000558445 SPRR3Q9UBC9 169 aa7.47□□□□□ -1.21
TRPM1-207ENST00000558445 ZFAND3Q9H8U3 227 aa7.47□□□□□ -1.21
TRPM1-207ENST00000558445 PRRC2AP48634 2157 aaKnown RBP7.47□□□□□ -1.21
TRPM1-207ENST00000558445 TRBV6-5A0A0K0K1A5 114 aa7.47□□□□□ -1.21
TRPM1-207ENST00000558445 TMEM256-PLSCR3K7ERE1 68 aa7.47□□□□□ -1.21
TRPM1-207ENST00000558445 LHBP01229 141 aa7.47□□□□□ -1.21
TRPM1-207ENST00000558445 PDE6GP18545 87 aa7.47□□□□□ -1.21
TRPM1-207ENST00000558445 CLPSL1A2RUU4 121 aa7.46□□□□□ -1.21
TRPM1-207ENST00000558445 ZNF580Q9UK33 172 aa7.46□□□□□ -1.21
TRPM1-207ENST00000558445 NDUFS5O43920 106 aa7.46□□□□□ -1.22
TRPM1-207ENST00000558445 GPHB5Q86YW7 130 aa7.46□□□□□ -1.22
TRPM1-207ENST00000558445 IGHV1-46P01743 117 aa7.46□□□□□ -1.22
TRPM1-207ENST00000558445 RNASE6Q93091 150 aaKnown RBP7.46□□□□□ -1.22
TRPM1-207ENST00000558445 DSCAMO60469 2012 aa7.45□□□□□ -1.22
TRPM1-207ENST00000558445 MIR7-3HGQ8N6C7 128 aa7.45□□□□□ -1.22
TRPM1-207ENST00000558445 CHKB-CPT1BH3BT56 60 aa7.45□□□□□ -1.22
TRPM1-207ENST00000558445 PRB1P04280 392 aa7.45□□□□□ -1.22
TRPM1-207ENST00000558445 CCL4P13236 92 aa7.45□□□□□ -1.22
TRPM1-207ENST00000558445 VMO1Q7Z5L0 202 aa7.45□□□□□ -1.22
TRPM1-207ENST00000558445 LITAFQ99732 161 aa7.44□□□□□ -1.22
TRPM1-207ENST00000558445 DPM3Q9P2X0 92 aa7.44□□□□□ -1.22
TRPM1-207ENST00000558445 LRP4O75096 1905 aa7.44□□□□□ -1.22
TRPM1-207ENST00000558445 SMAD5-AS1Q9Y6J3 95 aa7.44□□□□□ -1.22
TRPM1-207ENST00000558445 MED13Q9UHV7 2174 aa7.44□□□□□ -1.22
TRPM1-207ENST00000558445 IGKV3-20P01619 116 aa7.44□□□□□ -1.22
TRPM1-207ENST00000558445 IGHV3OR16-12A0A075B7B8 117 aa7.43□□□□□ -1.22
TRPM1-207ENST00000558445 NREPQ16612 68 aa7.43□□□□□ -1.22
TRPM1-207ENST00000558445 TMEM254Q8TBM7 123 aa7.43□□□□□ -1.22
TRPM1-207ENST00000558445 IGLV11-55A0A075B6I3 123 aa7.43□□□□□ -1.22
TRPM1-207ENST00000558445 C1orf158Q8N1D5 194 aa7.43□□□□□ -1.22
TRPM1-207ENST00000558445 C16orf95Q9H693 158 aa7.43□□□□□ -1.22
TRPM1-207ENST00000558445 A0A087WZ39 114 aa7.42□□□□□ -1.22
TRPM1-207ENST00000558445 PRYO14603 147 aa7.42□□□□□ -1.22
TRPM1-207ENST00000558445 CTSGP08311 255 aa7.42□□□□□ -1.22
TRPM1-207ENST00000558445 CCL5P13501 91 aa7.42□□□□□ -1.22
TRPM1-207ENST00000558445 SLPIP03973 132 aa7.42□□□□□ -1.22
TRPM1-207ENST00000558445 Q6ZRU5 148 aa7.41□□□□□ -1.22
TRPM1-207ENST00000558445 CDKN2A-AS1Q9UH64 79 aa7.41□□□□□ -1.22
TRPM1-207ENST00000558445 PSPHP1O15172 72 aa7.41□□□□□ -1.22
TRPM1-207ENST00000558445 Q8N2B8 174 aa7.41□□□□□ -1.22
TRPM1-207ENST00000558445 EPM2AB3EWF7 344 aa7.41□□□□□ -1.22
TRPM1-207ENST00000558445 FAM218AQ96MZ4 157 aa7.41□□□□□ -1.22
TRPM1-207ENST00000558445 BPESC1Q9GZL8 116 aa7.41□□□□□ -1.22
TRPM1-207ENST00000558445 LYPD5Q6UWN5 251 aa7.4□□□□□ -1.23
TRPM1-207ENST00000558445 A0A087WYN8 130 aa7.39□□□□□ -1.23
TRPM1-207ENST00000558445 NDUFB1O75438 58 aa7.39□□□□□ -1.23
TRPM1-207ENST00000558445 Q8N6K4 173 aa7.39□□□□□ -1.23
TRPM1-207ENST00000558445 SMIM11BQ8TCY0 68 aa7.39□□□□□ -1.23
TRPM1-207ENST00000558445 IGLV1-44P01699 117 aa7.39□□□□□ -1.23
TRPM1-207ENST00000558445 GNLYP22749 145 aa7.39□□□□□ -1.23
TRPM1-207ENST00000558445 KTN1-AS1Q86SY8 53 aa7.39□□□□□ -1.23
TRPM1-207ENST00000558445 Q8N3U1 123 aa7.39□□□□□ -1.23
TRPM1-207ENST00000558445 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.38□□□□□ -1.23
TRPM1-207ENST00000558445 IGHV3-73A0A0B4J1V6 119 aa7.38□□□□□ -1.23
TRPM1-207ENST00000558445 IGKV2-29A2NJV5 120 aaPredicted RBP7.38□□□□□ -1.23
TRPM1-207ENST00000558445 AVPP01185 164 aa7.38□□□□□ -1.23
TRPM1-207ENST00000558445 Q0VFX4 171 aa7.38□□□□□ -1.23
TRPM1-207ENST00000558445 SPTA1P02549 2419 aa7.38□□□□□ -1.23
TRPM1-207ENST00000558445 M0QY20 66 aa7.38□□□□□ -1.23
TRPM1-207ENST00000558445 APOC4P55056 127 aa7.38□□□□□ -1.23
TRPM1-207ENST00000558445 FAM19A3Q7Z5A8 133 aa7.38□□□□□ -1.23
TRPM1-207ENST00000558445 TRGV2A0A075B6R0 118 aa7.38□□□□□ -1.23
TRPM1-207ENST00000558445 C5orf67F2Z3F1 127 aa7.38□□□□□ -1.23
TRPM1-207ENST00000558445 ZFAND2AQ8N6M9 145 aa7.38□□□□□ -1.23
TRPM1-207ENST00000558445 RNASE3P12724 160 aaKnown RBP7.37□□□□□ -1.23
TRPM1-207ENST00000558445 LRCOL1A6NCL2 159 aa7.37□□□□□ -1.23
TRPM1-207ENST00000558445 PRR9Q5T870 116 aa7.37□□□□□ -1.23
TRPM1-207ENST00000558445 BEAN1Q3B7T3 259 aa7.36□□□□□ -1.23
TRPM1-207ENST00000558445 BPY2O14599 106 aa7.36□□□□□ -1.23
TRPM1-207ENST00000558445 LYPD2Q6UXB3 125 aa7.36□□□□□ -1.23
TRPM1-207ENST00000558445 TRBV10-1A0A0K0K1A3 114 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms