RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 C10orf99Q6UWK7 81 aa10.58□□□□□ -0.72
SPG11-210ENST00000558319 C20orf203Q8NBC4 194 aa10.58□□□□□ -0.72
SPG11-210ENST00000558319 PPDPFQ9H3Y8 114 aa10.58□□□□□ -0.72
SPG11-210ENST00000558319 NDUFA7O95182 113 aa10.58□□□□□ -0.72
SPG11-210ENST00000558319 C4orf3Q8WVX3 66 aa10.58□□□□□ -0.72
SPG11-210ENST00000558319 NLRC5Q86WI3 1866 aa10.58□□□□□ -0.72
SPG11-210ENST00000558319 C19orf71A6NCJ1 209 aa10.58□□□□□ -0.72
SPG11-210ENST00000558319 IGLV2-14P01704 120 aa10.58□□□□□ -0.72
SPG11-210ENST00000558319 LINC00694P0DN24 101 aa10.58□□□□□ -0.72
SPG11-210ENST00000558319 COL4A3Q01955 1670 aa10.57□□□□□ -0.72
SPG11-210ENST00000558319 C3orf84H3BNL1 204 aa10.57□□□□□ -0.72
SPG11-210ENST00000558319 CXCL5P42830 114 aa10.57□□□□□ -0.72
SPG11-210ENST00000558319 TNCP24821 2201 aa10.57□□□□□ -0.72
SPG11-210ENST00000558319 PRM2P04554 102 aa10.57□□□□□ -0.72
SPG11-210ENST00000558319 IGKV1D-37A0A075B6S9 117 aa10.57□□□□□ -0.72
SPG11-210ENST00000558319 IGHV4-30-4P0DP06 118 aa10.57□□□□□ -0.72
SPG11-210ENST00000558319 IGHV4-31P0DP07 118 aa10.57□□□□□ -0.72
SPG11-210ENST00000558319 ZFAND3Q9H8U3 227 aa10.57□□□□□ -0.72
SPG11-210ENST00000558319 Q6ZTI0 123 aa10.56□□□□□ -0.72
SPG11-210ENST00000558319 M0QXV9 152 aa10.56□□□□□ -0.72
SPG11-210ENST00000558319 PDE6GP18545 87 aa10.56□□□□□ -0.72
SPG11-210ENST00000558319 FAM19A1Q7Z5A9 133 aa10.56□□□□□ -0.72
SPG11-210ENST00000558319 TRBV6-1A0A0K0K1D8 114 aa10.55□□□□□ -0.72
SPG11-210ENST00000558319 SPINK6Q6UWN8 80 aa10.55□□□□□ -0.72
SPG11-210ENST00000558319 MAP6D1Q9H9H5 199 aa10.55□□□□□ -0.72
SPG11-210ENST00000558319 B9D2Q9BPU9 175 aa10.55□□□□□ -0.72
SPG11-210ENST00000558319 SPTAN1Q13813 2472 aaKnown RBP10.54□□□□□ -0.72
SPG11-210ENST00000558319 MED13LQ71F56 2210 aa10.54□□□□□ -0.72
SPG11-210ENST00000558319 IGF1P05019 195 aa10.54□□□□□ -0.72
SPG11-210ENST00000558319 CRYGDP07320 174 aa10.54□□□□□ -0.72
SPG11-210ENST00000558319 PROK1P58294 105 aa10.54□□□□□ -0.72
SPG11-210ENST00000558319 LINC00467Q9BRT7 94 aa10.54□□□□□ -0.72
SPG11-210ENST00000558319 RIF1Q5UIP0 2472 aaKnown RBP10.54□□□□□ -0.72
SPG11-210ENST00000558319 A0A1B0GXF2 115 aa10.54□□□□□ -0.72
SPG11-210ENST00000558319 K7ERS5 55 aa10.54□□□□□ -0.72
SPG11-210ENST00000558319 C1orf158Q8N1D5 194 aa10.53□□□□□ -0.72
SPG11-210ENST00000558319 IGLV2-8P01709 118 aa10.53□□□□□ -0.72
SPG11-210ENST00000558319 FAM222AQ5U5X8 452 aa10.53□□□□□ -0.72
SPG11-210ENST00000558319 MSMPQ1L6U9 139 aa10.53□□□□□ -0.72
SPG11-210ENST00000558319 ODF3L1Q8IXM7 274 aa10.53□□□□□ -0.72
SPG11-210ENST00000558319 WFDC10AQ9H1F0 79 aa10.53□□□□□ -0.72
SPG11-210ENST00000558319 FAM30AQ9NZY2 134 aa10.53□□□□□ -0.72
SPG11-210ENST00000558319 LY6G6CO95867 125 aa10.52□□□□□ -0.72
SPG11-210ENST00000558319 ZFAND2AQ8N6M9 145 aa10.52□□□□□ -0.72
SPG11-210ENST00000558319 MED14OSP0DP75 135 aa10.52□□□□□ -0.73
SPG11-210ENST00000558319 POM121L12Q8N7R1 296 aa10.52□□□□□ -0.73
SPG11-210ENST00000558319 NEXN-AS1Q8NBZ9 246 aa10.52□□□□□ -0.73
SPG11-210ENST00000558319 CDKN2A-AS1Q9UH64 79 aa10.52□□□□□ -0.73
SPG11-210ENST00000558319 A8MZ25 164 aa10.52□□□□□ -0.73
SPG11-210ENST00000558319 TMEM223A0PJW6 202 aa10.52□□□□□ -0.73
SPG11-210ENST00000558319 INSL3P51460 131 aa10.52□□□□□ -0.73
SPG11-210ENST00000558319 TRBV27A0A0K0K1C4 114 aa10.51□□□□□ -0.73
SPG11-210ENST00000558319 C18orf65Q6ZTR6 163 aa10.51□□□□□ -0.73
SPG11-210ENST00000558319 XAGE1AQ9HD64 81 aa10.51□□□□□ -0.73
SPG11-210ENST00000558319 MALRD1Q5VYJ5 2156 aa10.51□□□□□ -0.73
SPG11-210ENST00000558319 NCOA6Q14686 2063 aaPredicted RBP10.51□□□□□ -0.73
SPG11-210ENST00000558319 WFDC13Q8IUB5 93 aa10.51□□□□□ -0.73
SPG11-210ENST00000558319 SERP2Q8N6R1 65 aa10.51□□□□□ -0.73
SPG11-210ENST00000558319 DEFB131BA0A096LNP1 70 aa10.5□□□□□ -0.73
SPG11-210ENST00000558319 IGKV2-28A0A075B6P5 120 aa10.5□□□□□ -0.73
SPG11-210ENST00000558319 IGKV2D-28P01615 120 aa10.5□□□□□ -0.73
SPG11-210ENST00000558319 PRR15LQ9BU68 103 aa10.5□□□□□ -0.73
SPG11-210ENST00000558319 C22orf34Q6ZV56 151 aa10.5□□□□□ -0.73
SPG11-210ENST00000558319 XGP55808 180 aa10.49□□□□□ -0.73
SPG11-210ENST00000558319 LINC00308Q8TCZ7 52 aa10.49□□□□□ -0.73
SPG11-210ENST00000558319 GPR179Q6PRD1 2367 aa10.49□□□□□ -0.73
SPG11-210ENST00000558319 REG3AQ06141 175 aa10.49□□□□□ -0.73
SPG11-210ENST00000558319 SOSTDC1Q6X4U4 206 aa10.49□□□□□ -0.73
SPG11-210ENST00000558319 CCKP06307 115 aa10.49□□□□□ -0.73
SPG11-210ENST00000558319 SMR3AQ99954 134 aa10.49□□□□□ -0.73
SPG11-210ENST00000558319 MYCNOSP40205 109 aa10.48□□□□□ -0.73
SPG11-210ENST00000558319 C20orf173Q96LM9 149 aa10.48□□□□□ -0.73
SPG11-210ENST00000558319 ZNF22P17026 224 aaPredicted RBP10.48□□□□□ -0.73
SPG11-210ENST00000558319 TANC1Q9C0D5 1861 aa10.48□□□□□ -0.73
SPG11-210ENST00000558319 KRTAP27-1Q3LI81 207 aa10.47□□□□□ -0.73
SPG11-210ENST00000558319 C2orf16Q68DN1 1984 aa10.47□□□□□ -0.73
SPG11-210ENST00000558319 RPL37AP8A6NKH3 93 aa10.47□□□□□ -0.73
SPG11-210ENST00000558319 NANOS2P60321 138 aaKnown RBP10.47□□□□□ -0.73
SPG11-210ENST00000558319 Q8NA96 180 aa10.47□□□□□ -0.73
SPG11-210ENST00000558319 RETNLBQ9BQ08 111 aa10.47□□□□□ -0.73
SPG11-210ENST00000558319 C11orf1Q9H5F2 150 aa10.47□□□□□ -0.73
SPG11-210ENST00000558319 TRBV30A0A0K0K1B3 111 aa10.47□□□□□ -0.73
SPG11-210ENST00000558319 ATP5EP2Q5VTU8 51 aa10.46□□□□□ -0.73
SPG11-210ENST00000558319 IGLV4-3A0A075B6K6 122 aa10.46□□□□□ -0.73
SPG11-210ENST00000558319 A0A0J9YX75 114 aa10.46□□□□□ -0.73
SPG11-210ENST00000558319 COX7CP15954 63 aa10.46□□□□□ -0.73
SPG11-210ENST00000558319 UFSP1Q6NVU6 142 aa10.46□□□□□ -0.73
SPG11-210ENST00000558319 CHCHD10Q8WYQ3 142 aaPredicted RBP10.46□□□□□ -0.73
SPG11-210ENST00000558319 TRBV10-1A0A0K0K1A3 114 aa10.46□□□□□ -0.74
SPG11-210ENST00000558319 CCDC140Q96MF4 163 aa10.46□□□□□ -0.74
SPG11-210ENST00000558319 C6orf99Q4VX62 202 aa10.46□□□□□ -0.74
SPG11-210ENST00000558319 IGLV9-49A0A0B4J1Y8 123 aa10.45□□□□□ -0.74
SPG11-210ENST00000558319 LOC100131303A0A0U1RQF7 123 aa10.45□□□□□ -0.74
SPG11-210ENST00000558319 PRO0255Q9UI72 69 aa10.45□□□□□ -0.74
SPG11-210ENST00000558319 LY6G6DO95868 133 aa10.44□□□□□ -0.74
SPG11-210ENST00000558319 FAM19A3Q7Z5A8 133 aa10.44□□□□□ -0.74
SPG11-210ENST00000558319 KIAA1549Q9HCM3 1950 aa10.44□□□□□ -0.74
SPG11-210ENST00000558319 A6NDX4 124 aa10.44□□□□□ -0.74
SPG11-210ENST00000558319 Q6Q795 121 aa10.43□□□□□ -0.74
SPG11-210ENST00000558319 C2orf91Q6ZV80 131 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms