RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 WFDC2Q14508 124 aa6.65□□□□□ -1.34
USP3-207ENST00000558218 Q6ZSA8 131 aa6.65□□□□□ -1.34
USP3-207ENST00000558218 PGLYRP4Q96LB8 373 aa6.65□□□□□ -1.34
USP3-207ENST00000558218 RPP21Q9H633 154 aaKnown RBP6.65□□□□□ -1.34
USP3-207ENST00000558218 PRR34Q9NV39 138 aa6.65□□□□□ -1.34
USP3-207ENST00000558218 DNAH5Q8TE73 4624 aa6.65□□□□□ -1.35
USP3-207ENST00000558218 ANGP03950 147 aaKnown RBP6.64□□□□□ -1.35
USP3-207ENST00000558218 MGPP08493 103 aa6.64□□□□□ -1.35
USP3-207ENST00000558218 FOXA3P55318 350 aaPredicted RBP6.64□□□□□ -1.35
USP3-207ENST00000558218 MPV17L2Q567V2 206 aa6.64□□□□□ -1.35
USP3-207ENST00000558218 Q5VSD8 79 aa6.64□□□□□ -1.35
USP3-207ENST00000558218 SUMO4Q6EEV6 95 aa6.64□□□□□ -1.35
USP3-207ENST00000558218 TEX261Q6UWH6 196 aa6.64□□□□□ -1.35
USP3-207ENST00000558218 FAM231DQ6ZW35 169 aa6.64□□□□□ -1.35
USP3-207ENST00000558218 C15orf54Q8N8G6 183 aa6.64□□□□□ -1.35
USP3-207ENST00000558218 TRAV8-4A0A0B4J246 113 aa6.63□□□□□ -1.35
USP3-207ENST00000558218 A8MWL6 223 aa6.63□□□□□ -1.35
USP3-207ENST00000558218 INAFM2P0DMQ5 153 aa6.63□□□□□ -1.35
USP3-207ENST00000558218 RBX1P62877 108 aa6.63□□□□□ -1.35
USP3-207ENST00000558218 TWIST1Q15672 202 aa6.63□□□□□ -1.35
USP3-207ENST00000558218 CT83Q5H943 113 aa6.63□□□□□ -1.35
USP3-207ENST00000558218 ALKAL2Q6UX46 152 aa6.63□□□□□ -1.35
USP3-207ENST00000558218 SMIM15Q7Z3B0 74 aa6.63□□□□□ -1.35
USP3-207ENST00000558218 FAM210AQ96ND0 272 aa6.63□□□□□ -1.35
USP3-207ENST00000558218 APOBP04114 4563 aaKnown RBP6.63□□□□□ -1.35
USP3-207ENST00000558218 K7EN84 100 aa6.62□□□□□ -1.35
USP3-207ENST00000558218 LECT2O14960 151 aa6.62□□□□□ -1.35
USP3-207ENST00000558218 NKX2-5P52952 324 aaPredicted RBP6.62□□□□□ -1.35
USP3-207ENST00000558218 DGAT2L7PQ6IED9 249 aa6.62□□□□□ -1.35
USP3-207ENST00000558218 TMEM243Q9BU79 118 aa6.62□□□□□ -1.35
USP3-207ENST00000558218 RNASE7Q9H1E1 156 aaKnown RBP6.62□□□□□ -1.35
USP3-207ENST00000558218 FAM30AQ9NZY2 134 aa6.62□□□□□ -1.35
USP3-207ENST00000558218 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.61□□□□□ -1.35
USP3-207ENST00000558218 FAM231BA6NCW3 169 aa6.61□□□□□ -1.35
USP3-207ENST00000558218 C9orf118A6NHY6 69 aa6.61□□□□□ -1.35
USP3-207ENST00000558218 GATCO43716 136 aaKnown RBP6.61□□□□□ -1.35
USP3-207ENST00000558218 GAGE6Q13070 117 aa6.61□□□□□ -1.35
USP3-207ENST00000558218 LINC00269Q8N2A0 174 aa6.61□□□□□ -1.35
USP3-207ENST00000558218 CLRN3Q8NCR9 226 aa6.61□□□□□ -1.35
USP3-207ENST00000558218 GTSF1Q8WW33 167 aa6.61□□□□□ -1.35
USP3-207ENST00000558218 ABCA13Q86UQ4 5058 aa6.6□□□□□ -1.35
USP3-207ENST00000558218 hCG_2014768A0A024R1R8 64 aa6.6□□□□□ -1.35
USP3-207ENST00000558218 H7C423 109 aa6.6□□□□□ -1.35
USP3-207ENST00000558218 NCR2O95944 276 aa6.6□□□□□ -1.35
USP3-207ENST00000558218 SMR3BP02814 79 aaPredicted RBP6.6□□□□□ -1.35
USP3-207ENST00000558218 COTL1Q14019 142 aa6.6□□□□□ -1.35
USP3-207ENST00000558218 EIF5A2Q9GZV4 153 aaKnown RBP6.6□□□□□ -1.35
USP3-207ENST00000558218 GFRA4Q9GZZ7 299 aa6.6□□□□□ -1.35
USP3-207ENST00000558218 REG3AQ06141 175 aa6.59□□□□□ -1.35
USP3-207ENST00000558218 KRTAP26-1Q6PEX3 210 aa6.59□□□□□ -1.35
USP3-207ENST00000558218 GATD1Q8NB37 220 aa6.59□□□□□ -1.35
USP3-207ENST00000558218 C20orf203Q8NBC4 194 aa6.59□□□□□ -1.35
USP3-207ENST00000558218 BORCS7Q96B45 105 aa6.59□□□□□ -1.35
USP3-207ENST00000558218 CHAC1Q9BUX1 264 aa6.59□□□□□ -1.35
USP3-207ENST00000558218 OSTCQ9NRP0 149 aa6.59□□□□□ -1.35
USP3-207ENST00000558218 ZNF727A8MUV8 499 aa6.58□□□□□ -1.36
USP3-207ENST00000558218 USP17L23D6RBM5 183 aa6.58□□□□□ -1.36
USP3-207ENST00000558218 ZNF561-AS1K7EIQ3 104 aa6.58□□□□□ -1.36
USP3-207ENST00000558218 UBE2L6O14933 153 aa6.58□□□□□ -1.36
USP3-207ENST00000558218 FAM74A3Q4VXF1 159 aa6.58□□□□□ -1.36
USP3-207ENST00000558218 LINC01551Q86U37 167 aa6.58□□□□□ -1.36
USP3-207ENST00000558218 TSKUQ8WUA8 353 aa6.58□□□□□ -1.36
USP3-207ENST00000558218 SMIM7Q9BQ49 75 aa6.58□□□□□ -1.36
USP3-207ENST00000558218 SMDT1Q9H4I9 107 aa6.58□□□□□ -1.36
USP3-207ENST00000558218 TRBV6-5A0A0K0K1A5 114 aa6.57□□□□□ -1.36
USP3-207ENST00000558218 A0A1B0GUT8 65 aa6.57□□□□□ -1.36
USP3-207ENST00000558218 HLA-DQA1P01909 254 aa6.57□□□□□ -1.36
USP3-207ENST00000558218 SRP19P09132 144 aaKnown RBP6.57□□□□□ -1.36
USP3-207ENST00000558218 AMTP48728 403 aa6.57□□□□□ -1.36
USP3-207ENST00000558218 C9orf163Q8N9P6 203 aa6.57□□□□□ -1.36
USP3-207ENST00000558218 TMEM191AQ9H0A3 160 aa6.57□□□□□ -1.36
USP3-207ENST00000558218 IGLV4-60A0A075B6I1 120 aa6.56□□□□□ -1.36
USP3-207ENST00000558218 PRSS1P07477 247 aa6.56□□□□□ -1.36
USP3-207ENST00000558218 CEBPGP53567 150 aa6.56□□□□□ -1.36
USP3-207ENST00000558218 KRTAP3-1Q9BYR8 98 aa6.56□□□□□ -1.36
USP3-207ENST00000558218 SDHAF1A6NFY7 115 aa6.55□□□□□ -1.36
USP3-207ENST00000558218 HIGD1CA8MV81 97 aa6.55□□□□□ -1.36
USP3-207ENST00000558218 I3L3M4 83 aa6.55□□□□□ -1.36
USP3-207ENST00000558218 PPP1R17O96001 155 aa6.55□□□□□ -1.36
USP3-207ENST00000558218 ZNF25P17030 456 aaPredicted RBP6.55□□□□□ -1.36
USP3-207ENST00000558218 CNBPP62633 177 aaKnown RBP6.55□□□□□ -1.36
USP3-207ENST00000558218 HAMPP81172 84 aa6.55□□□□□ -1.36
USP3-207ENST00000558218 TMEM241Q24JQ0 296 aa6.55□□□□□ -1.36
USP3-207ENST00000558218 LINC01620Q4KN68 170 aa6.55□□□□□ -1.36
USP3-207ENST00000558218 KRTAP5-3Q6L8H2 238 aa6.55□□□□□ -1.36
USP3-207ENST00000558218 CFAP161Q6P656 301 aa6.55□□□□□ -1.36
USP3-207ENST00000558218 SCXQ7RTU7 201 aa6.55□□□□□ -1.36
USP3-207ENST00000558218 MRAP2Q96G30 205 aa6.55□□□□□ -1.36
USP3-207ENST00000558218 TRAV26-2A0A0B4J265 109 aa6.54□□□□□ -1.36
USP3-207ENST00000558218 APCSP02743 223 aa6.54□□□□□ -1.36
USP3-207ENST00000558218 PMCHP20382 165 aa6.54□□□□□ -1.36
USP3-207ENST00000558218 RIGQ13278 110 aa6.54□□□□□ -1.36
USP3-207ENST00000558218 PEA15Q15121 130 aa6.54□□□□□ -1.36
USP3-207ENST00000558218 AMMECR1LQ6DCA0 310 aa6.54□□□□□ -1.36
USP3-207ENST00000558218 CLPSL2Q6UWE3 100 aa6.54□□□□□ -1.36
USP3-207ENST00000558218 CIRBP-AS1Q8TBR5 109 aa6.54□□□□□ -1.36
USP3-207ENST00000558218 DEFB104AQ8WTQ1 72 aa6.54□□□□□ -1.36
USP3-207ENST00000558218 ST20Q9HBF5 79 aa6.54□□□□□ -1.36
USP3-207ENST00000558218 IGLV10-54A0A075B6I4 117 aa6.53□□□□□ -1.36
USP3-207ENST00000558218 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 173.6 ms